Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_K16
(394 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25H1.03 |mug66|mug66|meiotically upregulated gene Mug66|Schi... 28 0.45
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 27 1.4
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 25 4.2
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 25 4.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 4.2
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 25 5.5
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 25 5.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 5.5
SPAC8E11.01c ||SPAC959.01|beta-fructofuranosidase|Schizosaccharo... 24 9.7
SPAC7D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 9.7
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 24 9.7
>SPAC25H1.03 |mug66|mug66|meiotically upregulated gene
Mug66|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 28.3 bits (60), Expect = 0.45
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 87 HRTFPTVQAKTSMVLDSYLPILLASQL 167
HR F TV A+T VLD +P L+ ++L
Sbjct: 30 HRQFSTVPARTIDVLDITVPTLVGAEL 56
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 26.6 bits (56), Expect = 1.4
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3
Query: 164 LGSQEDWQIGIENHTCLRLHCRKRSVDGIQKYRPSIHTAYHQHDLSVIKDGA 9
L S D Q ++ T LH RK+SVDG ++ S+ Y L V++ GA
Sbjct: 581 LPSSNDEQTPVKE-TIPFLHIRKKSVDGNWEFNKSLTGTY----LDVLESGA 627
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 25.0 bits (52), Expect = 4.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 256 RDRSSLQLLNEYYFNG 303
R+R+SL L+EYY NG
Sbjct: 374 RNRNSLSNLDEYYVNG 389
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.0 bits (52), Expect = 4.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 136 ESRTILVFACTVGNVRWMEFRNIDHQYIRHTTNTTF 29
+S + V G+VR + R++DH I + ++TF
Sbjct: 220 DSINVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTF 255
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.0 bits (52), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 244 QTYSRDRSSLQLLNEYYFNGFLYVYIYV--YLNIDY 345
QT R++L+L + F G LY+ +Y+ Y+N DY
Sbjct: 1173 QTKLIGRAALELRDSKVFKGLLYLILYLGNYMN-DY 1207
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 24.6 bits (51), Expect = 5.5
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +1
Query: 109 KRRQVWFSIPICQSSWLPS**ATTPVADYKQQHSKYQ---LPRCHD----PSQTYSRDRS 267
+RR +++P+ ++S PS A +P KQ+H Y LP+ + P+ +SR S
Sbjct: 176 ERRFTEWNVPLRETSPSPSETADSPNKLPKQKHPAYSFVTLPKREEILKRPASLHSRVES 235
Query: 268 SLQLLNE 288
+ +N+
Sbjct: 236 TNSFINQ 242
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 24.6 bits (51), Expect = 5.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 137 GIENHTCLRLHCRKRSVDGIQK 72
G+EN CL + C + ++G +K
Sbjct: 226 GLENCECLCVSCERMGINGFKK 247
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 24.6 bits (51), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 9 RTIFYYRKVVLVVCRMY*WSIF 74
R F YRK + +V ++ WS+F
Sbjct: 428 RDYFDYRKHICIVTDLFGWSVF 449
>SPAC8E11.01c
||SPAC959.01|beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 268 NYDLWSRFVMDHDIVEVDILNVVVC 194
NY L V+DH I+EV + ++C
Sbjct: 443 NYILEIEAVVDHSIIEVYLQGGIMC 467
>SPAC7D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 312
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 24 YRKVVLVVCRMY*WSIFLNSIHRTFPTVQAKTSMVL 131
Y+ V +V W++ ++SIH+ P +++ S L
Sbjct: 52 YKGVTFIVSTK--WNLTVDSIHKLIPEIKSSPSACL 85
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 23.8 bits (49), Expect = 9.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 246 NLLQRS*FLTTFKRILFQWFP 308
NL+ S FL FK +QWFP
Sbjct: 906 NLIDNS-FLPGFKLFGYQWFP 925
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,798,229
Number of Sequences: 5004
Number of extensions: 38229
Number of successful extensions: 97
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 130061696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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