Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K16
         (394 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81143-3|CAB03519.2|  276|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z19157-2|CAA79568.1|  826|Caenorhabditis elegans Hypothetical pr...    28   2.7  
U39648-6|AAM15602.1|  557|Caenorhabditis elegans Abnormal dauer ...    28   2.7  
AF407572-1|AAL65132.1|  557|Caenorhabditis elegans DAF-9 isoform...    28   2.7  
U70844-7|AAB09097.1|  686|Caenorhabditis elegans Adam (disintegr...    27   4.8  
AF045645-5|AAL06039.2|  140|Caenorhabditis elegans Ground-like (...    27   4.8  
AF025471-3|AAB71061.1|  183|Caenorhabditis elegans Hypothetical ...    27   6.3  
Z81124-5|CAB03374.1|  328|Caenorhabditis elegans Hypothetical pr...    26   8.4  

>Z81143-3|CAB03519.2|  276|Caenorhabditis elegans Hypothetical
           protein ZK265.4 protein.
          Length = 276

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 68  YISEFHPPNVSYSASEDKYGSRFLSANPLGFPVDRPLH 181
           +ISE+HPP + Y      + + F +  P+ FP   P+H
Sbjct: 229 FISEYHPPFIPYYIPNQSFSNAF-NQYPMPFPY--PIH 263


>Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical
           protein C44H4.2 protein.
          Length = 738

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = +2

Query: 56  VLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFPVDRPLHLWXXXXXXXXXXXFHDVM 235
           +L+V +SE   P   YSA   + G+  L  NPL       LH+              D++
Sbjct: 366 LLLVDLSENKLPKTPYSAFNSRVGTVLLKENPL--VCTENLHMLQQGTGVYVRDS-PDII 422

Query: 236 IHHKPTPE 259
              KPTP+
Sbjct: 423 CGRKPTPK 430


>Z19157-2|CAA79568.1|  826|Caenorhabditis elegans Hypothetical
           protein ZC84.3 protein.
          Length = 826

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 8   PHHLLLPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSR 133
           P HL++PK RV  + Y L   + E+  P  S +A E K   R
Sbjct: 405 PIHLMVPKARVVLLEY-LTSLLDEYTEPGASINAKELKTAIR 445


>U39648-6|AAM15602.1|  557|Caenorhabditis elegans Abnormal dauer
           formation protein9, isoform b protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 100 LQCKRRQVWFSIPICQSSWL 159
           L C+R  +W ++ I QSSW+
Sbjct: 11  LSCERASIWCNMNISQSSWI 30


>AF407572-1|AAL65132.1|  557|Caenorhabditis elegans DAF-9 isoform A
           protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 100 LQCKRRQVWFSIPICQSSWL 159
           L C+R  +W ++ I QSSW+
Sbjct: 11  LSCERASIWCNMNISQSSWI 30


>U70844-7|AAB09097.1|  686|Caenorhabditis elegans Adam (disintegrin
           plus metalloprotease)family protein 4 protein.
          Length = 686

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = -1

Query: 295 NNIRLKVVRNYDLWSRFVMDHDIVEVDILNVVVCNLPQV*WPINWE 158
           N   LK+V +Y  +S F  ++  +    L  ++  + ++  PINW+
Sbjct: 187 NRCTLKLVADYSFYSIFGKNNTGIVTKFLVNMIARVNEIYTPINWD 232


>AF045645-5|AAL06039.2|  140|Caenorhabditis elegans Ground-like (grd
           related) protein26 protein.
          Length = 140

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 219 LIF*MLLFVICHRCSGLSTG 160
           LIF +L F +CH C+GL  G
Sbjct: 10  LIFAILFFDLCHGCAGLFGG 29


>AF025471-3|AAB71061.1|  183|Caenorhabditis elegans Hypothetical
           protein R52.5 protein.
          Length = 183

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 109 CTVGNVRWMEFRNIDHQ 59
           C+ G V WM FRN+D +
Sbjct: 87  CSDGKVAWMIFRNVDFE 103


>Z81124-5|CAB03374.1|  328|Caenorhabditis elegans Hypothetical
           protein T21B4.7 protein.
          Length = 328

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +1

Query: 259 DRSSLQLLNEYYFNGFLYVYIYVYLNI 339
           +RSS+ L N++ F+  LY  I+++LNI
Sbjct: 126 NRSSMILENKFRFSINLYRVIWIFLNI 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,845,528
Number of Sequences: 27780
Number of extensions: 214210
Number of successful extensions: 489
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)