Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_K16
(394 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 30 0.49
At5g45340.2 68418.m05566 cytochrome P450 family protein similar ... 30 0.64
At5g45340.1 68418.m05565 cytochrome P450 family protein similar ... 30 0.64
At4g19230.2 68417.m02837 cytochrome P450 family protein cytochro... 29 1.5
At4g19230.1 68417.m02836 cytochrome P450 family protein cytochro... 29 1.5
At4g01970.1 68417.m00262 galactinol-raffinose galactosyltransfer... 29 1.5
At5g40390.1 68418.m04899 raffinose synthase family protein simil... 28 2.6
At5g47020.1 68418.m05795 glycine-rich protein strong similarity ... 27 4.5
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 27 6.0
At4g36195.1 68417.m05150 serine carboxypeptidase S28 family prot... 26 7.9
At4g36190.1 68417.m05149 serine carboxypeptidase S28 family prot... 26 7.9
At2g43090.1 68415.m05348 aconitase C-terminal domain-containing ... 26 7.9
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 295 NNIRLKVVRNYDLWSRFV-MDHDIVEVDILNVVVC 194
N+I+LKV+ N WS+ H I ++ NV++C
Sbjct: 304 NDIKLKVLANQQKWSQCAKCQHMIARIEGCNVIIC 338
>At5g45340.2 68418.m05566 cytochrome P450 family protein similar to
SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 446
Score = 29.9 bits (64), Expect = 0.64
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 17 LLLPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFP 163
L LP G +G PYV + PNV ++A + +YGS F + LG P
Sbjct: 34 LPLPPGTMG-YPYVGETFQLYSQDPNVFFAAKQRRYGSVF-KTHVLGCP 80
>At5g45340.1 68418.m05565 cytochrome P450 family protein similar to
SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 463
Score = 29.9 bits (64), Expect = 0.64
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 17 LLLPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFP 163
L LP G +G PYV + PNV ++A + +YGS F + LG P
Sbjct: 34 LPLPPGTMG-YPYVGETFQLYSQDPNVFFAAKQRRYGSVF-KTHVLGCP 80
>At4g19230.2 68417.m02837 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 484
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 17 LLLPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFP 163
L LP G +G PYV + PNV + + + +YGS F + LG P
Sbjct: 34 LPLPPGTMG-WPYVGETFQLYSQDPNVFFQSKQKRYGSVF-KTHVLGCP 80
>At4g19230.1 68417.m02836 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 467
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 17 LLLPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFP 163
L LP G +G PYV + PNV + + + +YGS F + LG P
Sbjct: 34 LPLPPGTMG-WPYVGETFQLYSQDPNVFFQSKQKRYGSVF-KTHVLGCP 80
>At4g01970.1 68417.m00262 galactinol-raffinose
galactosyltransferase, putative similar to
galactinol-raffinose galactosyltransferase GI:6634701
from [Vigna angularis]
Length = 807
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 155 QEDWQIGIENHTCLRLHCRKRSVDGIQKYRPSIHTAYHQHDLSVIK 18
Q DW + +H C H R++ G Y S H H+ +IK
Sbjct: 529 QPDWDMFQSDHVCAEYHAASRAICGGPVYL-SDHLGKASHNFDLIK 573
>At5g40390.1 68418.m04899 raffinose synthase family protein similar
to galactinol-raffinose galactosyltransferase [Vigna
angularis] GI:6634701, seed imbibition protein
GB:AAA32975 GI:167100 from [Hordeum vulgare]; contains
Pfam profile PF05691: Raffinose synthase or seed
imbibition protein Sip1
Length = 783
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -3
Query: 155 QEDWQIGIENHTCLRLHCRKRSVDGIQKYRPSIHTAYHQHDLSVIK 18
Q DW + H C H R++ G Y I +HD ++K
Sbjct: 514 QPDWDMFQSTHPCAEFHAASRAISGGPIY---ISDCVGKHDFDLLK 556
>At5g47020.1 68418.m05795 glycine-rich protein strong similarity to
unknown protein (emb|CAB87688.1)
Length = 1417
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 181 PVADYKQQHSKYQLPRCHDP 240
PV YK KY+LP C+ P
Sbjct: 829 PVCPYKCVSEKYRLPNCYTP 848
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 90 GGWNSEI*TINTYGIPPT 37
GGW+ +I T YG+P T
Sbjct: 636 GGWDGQIRTFQNYGLPVT 653
>At4g36195.1 68417.m05150 serine carboxypeptidase S28 family protein
contains Pfam PF05577: Serine carboxypeptidase S28
Length = 488
Score = 26.2 bits (55), Expect = 7.9
Identities = 8/37 (21%), Positives = 18/37 (48%)
Frame = +1
Query: 40 WWYAVCIDGLYF*IPSTERFLQCKRRQVWFSIPICQS 150
WW+ VC + YF + ++ + + + +C+S
Sbjct: 338 WWFQVCTEVAYFQVAPANDSIRSHQINTEYHLDLCKS 374
>At4g36190.1 68417.m05149 serine carboxypeptidase S28 family protein
contains Pfam PF05577: Serine carboxypeptidase S28
Length = 493
Score = 26.2 bits (55), Expect = 7.9
Identities = 8/37 (21%), Positives = 18/37 (48%)
Frame = +1
Query: 40 WWYAVCIDGLYF*IPSTERFLQCKRRQVWFSIPICQS 150
WW+ VC + YF + ++ + + + +C+S
Sbjct: 338 WWFQVCTEVAYFQVAPANDSIRSHQINTEYHLDLCKS 374
>At2g43090.1 68415.m05348 aconitase C-terminal domain-containing
protein contains Pfam profile PF00694: Aconitase
C-terminal domain
Length = 251
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 109 CTVGNVRWMEFRNIDHQYIRHTTNTTFR 26
CT G+V +E R D I HTT ++
Sbjct: 193 CTTGDVATVELREGDSILINHTTGKEYK 220
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,229,759
Number of Sequences: 28952
Number of extensions: 196833
Number of successful extensions: 451
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 567552648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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