Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K13
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.0  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 571 YEIPQKVAHNPRDISKSKTPPDPL 500
           Y IPQ V  NP D   ++  PD +
Sbjct: 445 YGIPQGVVLNPLDARCNEIRPDAI 468


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 126 GSDIECPEYRYV 91
           GS   CPE+RY+
Sbjct: 276 GSSFICPEFRYL 287


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 544 NPRDISKSKTPPDPLISV 491
           +P +I   +TPP+PL +V
Sbjct: 341 SPYEILYGRTPPNPLDAV 358


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,406
Number of Sequences: 336
Number of extensions: 3098
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)