Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K13
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.46 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   4.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   5.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.5  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   7.5  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   7.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.9  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 158  QEVRQTRDPITSFK-EKVINNQLVTPDQLKEIDAKVRKETDEASKQAKA 301
            QE+ + ++ I   K EK  +  LV  DQ++E  AK R+E    +K+  A
Sbjct: 871  QEIEKDKEKIELMKQEKAAHKTLV--DQMEEEMAKARREVQALAKELAA 917


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 360 LSSAAPTPGRSCSTSRSLHAN 422
           L++  P  G  CS+ R LHAN
Sbjct: 797 LAAFTPNIGGPCSSIRRLHAN 817


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +2

Query: 149 DEVQEVRQTRDPITSFKEKVINNQLVTPDQLKEIDAKVRKETDEASKQAKADPEI 313
           D+   + + R+    F +K+   ++   ++  EIDAK  +  D+  K     P+I
Sbjct: 161 DQSVAMNRRREDQEDFVKKIDMVKVKDTEKANEIDAKAHEGKDDKIKPYDRIPQI 215


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 148  GRGPGGAPDQGPDHLLQGEGHQQPTRHSRSVKGNR 252
            G G GGA   GP+H      H   +  S S K  R
Sbjct: 1515 GSGAGGAGSAGPNH-SSPSNHTDDSSGSTSAKQYR 1548


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 126 GSDIECPEYRYVSISIRS 73
           GS   CPEYRY+   I +
Sbjct: 282 GSAFICPEYRYLMKGIET 299


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 126 GSDIECPEYRYVSISIRS 73
           GS   CPEYRY+   I +
Sbjct: 313 GSAFICPEYRYLMKGIET 330


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
 Frame = +1

Query: 280 GFETG*GRP*DPNRGALRGHILLEPGT-FHPRHPPRGAVAAHPGRCTQIDRFAI*KRKT* 456
           G   G G P  P   A     L  P     P+ PP G+   HP   T +   A     + 
Sbjct: 588 GLSMGLGLPQVPQPPAGSSLNLSHPSAGMVPQPPPPGSALGHPSIPTSLAAAAAAYSHSI 647

Query: 457 INSLGSFKCYIKH*LGG 507
            +++ S+   + H +GG
Sbjct: 648 ASTMSSYHSSMAH-IGG 663


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,074
Number of Sequences: 2352
Number of extensions: 13445
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)