Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K12
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    28   0.061
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.3  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 0.061
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = -3

Query: 294 NLFTIRKRSFGVPNL-----LRQFPKRTQVGKVLVYLKRNNYQFSSILHNNV 154
           N++T  KR    P L     L  +P RTQ+ +V    + + YQ   +L N V
Sbjct: 465 NIYTSSKRQRTSPQLSPMSSLPPYPNRTQITEVTQQTEPSIYQHDQLLRNKV 516


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 291 LFTIRKRSFGVPNLLRQFPKRTQVGKVLVYLKRNNYQFSSILHNNV 154
           +F +++ +  V  L     K T + K L Y     YQ S ++ NN+
Sbjct: 117 VFRLKQLNAKVEMLKNARVKNTALWKQLRYEHYRLYQLSVLIDNNM 162


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 428 IQLESSYIIVNARLVVSTCIQESV 357
           + L++ YII+N RL+      +SV
Sbjct: 826 LMLKNRYIILNGRLIKMETKAQSV 849


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 336 NIKLFIIEQSYTN*NLFTIRKRS 268
           N ++F I++SY+  N +  R+RS
Sbjct: 10  NREMFAIKKSYSIENGYPARRRS 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,591
Number of Sequences: 336
Number of extensions: 1805
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)