Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K10
         (590 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24)            31   0.93 
SB_59359| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_58940| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_58638| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_56745| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_49627| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_29334| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_5518| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.6  
SB_32294| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_31685| Best HMM Match : DUF1540 (HMM E-Value=3.6)                   28   6.6  
SB_29387| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_15958| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_2989| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.6  

>SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24)
          Length = 1058

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/48 (27%), Positives = 28/48 (58%)
 Frame = +3

Query: 423 RF*DPTTCQLREFLPAESLHSRIACRRKRDRQRVHGKLVYSR*FQVSL 566
           RF  PT  +++E +PA S+   + CR    +  ++ +L++S+  ++ L
Sbjct: 175 RFIFPTIDKVKETIPARSVEQVVCCRLTALQTAIYKRLIHSKALKIKL 222


>SB_59359| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_58940| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 119

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 32  YDGTLDAHRKSCRQYQTVIIKQQKVL 57


>SB_58638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 100

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_56745| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 100

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_49627| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 94

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_29334| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 110

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 23  YDGTLDAHRKSCRQYQTVIIKQQKVL 48


>SB_5518| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 118

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 32  YDGTLDAHRKSCRQYQTVIIKQQKVL 57


>SB_32294| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 64

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_31685| Best HMM Match : DUF1540 (HMM E-Value=3.6)
          Length = 785

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 110 YDGTLDAHRKSCRQYQTVIIKQQKVL 135


>SB_29387| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 32  YDGTLDAHRKSCRQYQTVIIKQQKVL 57


>SB_15958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 100

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_2989| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 86

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 531 FRGLFDDHAFSCRQFVNEVIQQEEIL 454
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,373,819
Number of Sequences: 59808
Number of extensions: 304777
Number of successful extensions: 617
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)