Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K10
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61947-5|AAB03134.1|  723|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z98877-9|CAB63405.1|  348|Caenorhabditis elegans Hypothetical pr...    27   7.5  

>U61947-5|AAB03134.1|  723|Caenorhabditis elegans Hypothetical
           protein C06G3.4 protein.
          Length = 723

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 403 APKYDSRGFEIPLHVNSENFFLLNHFIHELPAGESVIVKESTENLFTV 546
           A + D   +   L   SE+  +LN+F+ EL   E++ V +STE  F V
Sbjct: 274 ALRLDFTYYHKELKAASESVTILNNFLDELFRKETIWVPDSTEWYFIV 321


>Z98877-9|CAB63405.1|  348|Caenorhabditis elegans Hypothetical
           protein Y69H2.8 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 432 DPTTCQLREFLPAESLHSRIACRRKRD 512
           DP   Q+R+ L   SL SR++ RR  D
Sbjct: 88  DPRAIQIRDLLGPRSLSSRLSSRRNLD 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,442,519
Number of Sequences: 27780
Number of extensions: 241059
Number of successful extensions: 674
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)