Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K09
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical pr...    38   0.004
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    33   0.21 
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    33   0.21 
U80954-3|AAK77630.1|  603|Caenorhabditis elegans Defective in ge...    31   0.64 
U80954-2|AAK77629.1|  977|Caenorhabditis elegans Defective in ge...    31   0.64 
Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81074-9|CAB03040.1|  223|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF067948-4|AAO25983.1|  756|Caenorhabditis elegans Egl-27 relate...    29   3.4  
AF067948-3|AAO25984.1|  870|Caenorhabditis elegans Egl-27 relate...    29   3.4  
AF067948-2|AAD34654.1|  870|Caenorhabditis elegans Egl-27 relate...    29   3.4  
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate...    29   3.4  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    28   4.5  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    28   4.5  
Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical p...    28   5.9  
U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in bl...    27   7.9  

>U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical
           protein K02G10.5 protein.
          Length = 655

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = +3

Query: 288 SFFLIKCSSQTKHRYQVKGKHQPPSTGGTSRQTIEKCAENCISTPEYNPVCGSDNK-TYK 464
           S  LI+C S   +   V      PS+       +E C+ENC     +NPVC  D+K T+ 
Sbjct: 415 SCLLIRCESLNVYGVNV------PSSDLPRYGALETCSENCHCDSFFNPVCSEDSKLTFL 468

Query: 465 NQGRLFCAQNCGVKVTLARQAPCPSS 542
           +     CA   G+K   +    C  S
Sbjct: 469 SPCHAGCADMPGIKFGASNWTNCGCS 494


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 417 TPEYNPVCGSDNKTYKNQGRL 479
           T E+  VCGSD KTY N+ RL
Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489



 Score = 31.1 bits (67), Expect = 0.64
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 369 GTSRQTIEKCAENCISTPEYNPVCGSDNKTYKNQ 470
           G  R+   KC+E C     +  VCG+D KTY N+
Sbjct: 310 GVDRRPECKCSEQCTMNSAH--VCGTDGKTYLNE 341


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 417 TPEYNPVCGSDNKTYKNQGRL 479
           T E+  VCGSD KTY N+ RL
Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497



 Score = 31.1 bits (67), Expect = 0.64
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 369 GTSRQTIEKCAENCISTPEYNPVCGSDNKTYKNQ 470
           G  R+   KC+E C     +  VCG+D KTY N+
Sbjct: 318 GVDRRPECKCSEQCTMNSAH--VCGTDGKTYLNE 349


>U80954-3|AAK77630.1|  603|Caenorhabditis elegans Defective in germ
           line developmentprotein 3, isoform b protein.
          Length = 603

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 309 SSQTKHRYQVKGKHQPPSTGGTSRQ--TIEKCAENCISTP 422
           SS++KH Y  KGK    S+GG SR    +   +EN  + P
Sbjct: 475 SSRSKHSYMSKGKQFSESSGGPSRSHTRVSSFSENSSTVP 514


>U80954-2|AAK77629.1|  977|Caenorhabditis elegans Defective in germ
           line developmentprotein 3, isoform a protein.
          Length = 977

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 309 SSQTKHRYQVKGKHQPPSTGGTSRQ--TIEKCAENCISTP 422
           SS++KH Y  KGK    S+GG SR    +   +EN  + P
Sbjct: 475 SSRSKHSYMSKGKQFSESSGGPSRSHTRVSSFSENSSTVP 514


>Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical
           protein M195.2 protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 26/81 (32%), Positives = 31/81 (38%)
 Frame = +3

Query: 303 KCSSQTKHRYQVKGKHQPPSTGGTSRQTIEKCAENCISTPEYNPVCGSDNKTYKNQGRLF 482
           KCS+ T    +V      PST     Q    CA +C ST    P C S         R+ 
Sbjct: 4   KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRST--CRPTCSSSGGF---GCRMN 58

Query: 483 CAQNCGVKVTLARQAPCPSSS 545
           C   C V     + AP  SSS
Sbjct: 59  CQNTC-VNACNKQFAPTSSSS 78


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 327 RYQVKGKHQPPSTGGTSRQTIEKCAENCISTPEYNPVCGSDNKTYKNQGRLFCAQN 494
           R+  KG     +   T  Q ++ C    + T E NP   S+   YKN  R+ C  N
Sbjct: 266 RFLYKGIRGNANNFVTKAQCVDACETETV-TDEANPCKFSNAAKYKNGSRIICGPN 320


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 405 NCISTPEYNPVCGSDNKTYKNQGRLFCAQ 491
           +C       PVCG+DN TY N   L C Q
Sbjct: 18  DCDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46



 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 378 RQTIEKCAENCISTPEYNPVCGSDNKTYKN 467
           R + + C  NC +T E++PVC ++   Y+N
Sbjct: 109 RCSSKDCNHNCTNT-EFDPVCDTNGSVYRN 137


>Z81074-9|CAB03040.1|  223|Caenorhabditis elegans Hypothetical
           protein F32B6.4 protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +3

Query: 225 SQFRMV---TEFNTLWTTIIIL*PSFFLIKCSSQTKHRYQVKGKHQPPSTGGTSRQTIEK 395
           S FR+V   TE N++W T+II      + +  S     Y    ++  P TGG+    I K
Sbjct: 156 SNFRVVQVLTENNSMWWTVIINKQHTQMFRRLSDLVRCYH-SYRYINPETGGSEIFPISK 214

Query: 396 CAENCISTP 422
           C+    + P
Sbjct: 215 CSSQVPTNP 223


>AF067948-4|AAO25983.1|  756|Caenorhabditis elegans Egl-27 related
           protein 1, isoform c protein.
          Length = 756

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +3

Query: 222 GSQFRMVTEFNTLWTTIIIL*PSFFLIKCSSQTKHRYQVKGKHQPPSTGGTSRQTIEKCA 401
           G  F  +      W +I  +   ++L+K S+    RY  + K++P + GG+S  T EK  
Sbjct: 500 GKDFNEIRAEYLPWKSIRDIVEYYYLMKASN----RYTDRKKNKPSAGGGSSTTTDEKFT 555

Query: 402 ENCISTPEYNPVCGS 446
            N    P   P+  S
Sbjct: 556 -NIYIPPFNKPIAAS 569


>AF067948-3|AAO25984.1|  870|Caenorhabditis elegans Egl-27 related
           protein 1, isoform d protein.
          Length = 870

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +3

Query: 222 GSQFRMVTEFNTLWTTIIIL*PSFFLIKCSSQTKHRYQVKGKHQPPSTGGTSRQTIEKCA 401
           G  F  +      W +I  +   ++L+K S+    RY  + K++P + GG+S  T EK  
Sbjct: 500 GKDFNEIRAEYLPWKSIRDIVEYYYLMKASN----RYTDRKKNKPSAGGGSSTTTDEKFT 555

Query: 402 ENCISTPEYNPVCGS 446
            N    P   P+  S
Sbjct: 556 -NIYIPPFNKPIAAS 569


>AF067948-2|AAD34654.1|  870|Caenorhabditis elegans Egl-27 related
           protein 1, isoform b protein.
          Length = 870

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +3

Query: 222 GSQFRMVTEFNTLWTTIIIL*PSFFLIKCSSQTKHRYQVKGKHQPPSTGGTSRQTIEKCA 401
           G  F  +      W +I  +   ++L+K S+    RY  + K++P + GG+S  T EK  
Sbjct: 500 GKDFNEIRAEYLPWKSIRDIVEYYYLMKASN----RYTDRKKNKPSAGGGSSTTTDEKFT 555

Query: 402 ENCISTPEYNPVCGS 446
            N    P   P+  S
Sbjct: 556 -NIYIPPFNKPIAAS 569


>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
           protein 1, isoform a protein.
          Length = 1022

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 21/75 (28%), Positives = 34/75 (45%)
 Frame = +3

Query: 222 GSQFRMVTEFNTLWTTIIIL*PSFFLIKCSSQTKHRYQVKGKHQPPSTGGTSRQTIEKCA 401
           G  F  +      W +I  +   ++L+K S+    RY  + K++P + GG+S  T EK  
Sbjct: 500 GKDFNEIRAEYLPWKSIRDIVEYYYLMKASN----RYTDRKKNKPSAGGGSSTTTDEKFT 555

Query: 402 ENCISTPEYNPVCGS 446
            N    P   P+  S
Sbjct: 556 -NIYIPPFNKPIAAS 569


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
            protein Y26D4A.9 protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -3

Query: 546  LMKTGTGLAWPKSL*LHNFGHKIVFPGFCKFYYRYHTRGCILVLKCNS 403
            L KTG  L   K + ++NF  K +  G C    RY       + KCN+
Sbjct: 950  LKKTGVKLQTIKDIEMYNFIEKGIRGGICNAMLRYSRANNRHLKKCNT 997


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 334 RSRANINLLALVEHHDKQLRNARRIAFQHQNTTPCVVAIIKLTKTREDYF 483
           R R   N  AL +H  ++L   +R A     +  CV+++IK   + E  F
Sbjct: 85  RRRRRHNETALEDHLSEKLSREKRAAAHIMRSRKCVISVIKKMSSMECSF 134


>Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 402 ENCISTPEYNPVCGSD-NKTYKN 467
           +  + T EY P C SD  KTYKN
Sbjct: 73  DGILETKEYKPACMSDAKKTYKN 95


>Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 402 ENCISTPEYNPVCGSD-NKTYKN 467
           +  + T EY P C SD  KTYKN
Sbjct: 73  DGILETKEYKPACMSDAKKTYKN 95


>U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 2 protein.
          Length = 572

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +3

Query: 294 FLIKCSSQTKHRYQVKGKHQPPSTGGTSRQTIEKCAENCIST 419
           F+ +C S  +   Q    + PP+      Q  ++C++ C+ T
Sbjct: 101 FVQECQSSCQQSCQTTSCYTPPAPAQCMPQCQQQCSQQCVQT 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,211,753
Number of Sequences: 27780
Number of extensions: 360808
Number of successful extensions: 899
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)