Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_K07
(550 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 210 5e-55
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 208 2e-54
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 207 3e-54
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 139 1e-33
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 139 1e-33
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 139 1e-33
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 139 1e-33
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 139 1e-33
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 139 1e-33
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 139 1e-33
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 139 1e-33
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 139 1e-33
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 139 1e-33
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 139 1e-33
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 139 1e-33
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 139 1e-33
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 139 1e-33
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 139 1e-33
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 139 1e-33
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 139 1e-33
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 138 2e-33
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 138 3e-33
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 129 1e-30
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 113 1e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 85 3e-17
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 67 6e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 66 1e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 60 1e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 55 4e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 50 8e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 1e-06
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 50 1e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 1e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 1e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 48 3e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 48 4e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 48 4e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 48 4e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 48 4e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 48 4e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 47 7e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 1e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 46 1e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 46 1e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 45 3e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 45 3e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 44 5e-05
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 44 9e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 9e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 1e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 42 4e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 41 5e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.001
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 40 0.001
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 0.002
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 39 0.002
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 38 0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.010
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.010
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.041
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 34 0.054
At1g11970.1 68414.m01383 hypothetical protein 34 0.054
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 33 0.095
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 32 0.22
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 32 0.22
At1g47680.1 68414.m05297 hypothetical protein 29 2.7
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 28 4.7
At3g49055.1 68416.m05359 hypothetical protein 27 8.3
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 27 8.3
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 210 bits (513), Expect = 5e-55
Identities = 102/155 (65%), Positives = 113/155 (72%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRE 365
IQKESTLHLV Y+ P LAVL++YKVD +GK+ RL++E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120
Query: 366 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 470
C CG G FMA DRHYCGKC +T VFK D+
Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 208 bits (507), Expect = 2e-54
Identities = 101/153 (66%), Positives = 112/153 (73%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRE 365
IQKESTLHLV Y+ P LAVL++YKVD +GK+ RLR+E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120
Query: 366 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 464
C CGAG FMA DRHYCGKC T V++ +
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 207 bits (506), Expect = 3e-54
Identities = 100/153 (65%), Positives = 112/153 (73%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRE 365
IQKESTLHLV Y+ P LAVL++YK+D +GK+ RLR+E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120
Query: 366 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 464
C CGAG FMA DRHYCGKC T V++ +
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 107
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 191
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 192 KESTLHLV 215
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 136 bits (329), Expect = 9e-33
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 212 IQKESTLHLV 221
Score = 132 bits (319), Expect = 1e-31
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 136 IQKESTLHLV 145
Score = 101 bits (241), Expect = 4e-22
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 164
MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 139 bits (337), Expect = 1e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 191
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 192 KESTLHLV 215
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 138 bits (334), Expect = 2e-33
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 124 bits (298), Expect = 5e-29
Identities = 58/70 (82%), Positives = 65/70 (92%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 186 IQKESTLHLV 215
+Q++STLHL+
Sbjct: 61 VQEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 138 bits (333), Expect = 3e-33
Identities = 65/70 (92%), Positives = 69/70 (98%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 131 bits (316), Expect = 3e-31
Identities = 63/70 (90%), Positives = 66/70 (94%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 215 IQKESTLHLV 224
Score = 122 bits (294), Expect = 2e-28
Identities = 62/71 (87%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 182
MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 183 NIQKESTLHLV 215
NIQKESTLHLV
Sbjct: 291 NIQKESTLHLV 301
Score = 107 bits (256), Expect = 6e-24
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +3
Query: 3 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 182
+MQI KTLT KTIT++V SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 183 NIQKESTLHL 212
+IQK+S LHL
Sbjct: 62 SIQKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 129 bits (311), Expect = 1e-30
Identities = 63/70 (90%), Positives = 67/70 (95%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 186 IQKESTLHLV 215
IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 121 bits (292), Expect = 3e-28
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +3
Query: 3 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 182
T+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 183 NIQKESTLHLV 215
NIQKESTLHLV
Sbjct: 62 NIQKESTLHLV 72
Score = 108 bits (260), Expect = 2e-24
Identities = 54/70 (77%), Positives = 59/70 (84%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 186 IQKESTLHLV 215
I K+STL+LV
Sbjct: 612 IHKKSTLYLV 621
Score = 104 bits (249), Expect = 4e-23
Identities = 54/72 (75%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSD 179
MQIFVKTLT K I LEVE DTIENVKA +QDKEGI P+ QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 180 YNIQKESTLHLV 215
Y+IQKESTLHLV
Sbjct: 379 YSIQKESTLHLV 390
Score = 103 bits (248), Expect = 6e-23
Identities = 51/69 (73%), Positives = 56/69 (81%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
MQIFVK GK ITLEV SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 186 IQKESTLHL 212
I+ ESTLHL
Sbjct: 453 IRNESTLHL 461
Score = 94.3 bits (224), Expect = 5e-20
Identities = 51/75 (68%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = +3
Query: 6 MQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 170
M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 171 LSDYNIQKESTLHLV 215
L+ YNIQK STL+LV
Sbjct: 298 LAHYNIQKGSTLYLV 312
Score = 91.1 bits (216), Expect = 4e-19
Identities = 49/76 (64%), Positives = 58/76 (76%), Gaps = 7/76 (9%)
Frame = +3
Query: 6 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 164
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 165 RTLSDYNIQKESTLHL 212
RTL+DY I+ STL L
Sbjct: 215 RTLADYGIRNRSTLCL 230
Score = 90.6 bits (215), Expect = 6e-19
Identities = 50/75 (66%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Frame = +3
Query: 6 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 164
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 165 RTLSDYNIQKESTLH 209
RTL DYNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 113 bits (271), Expect = 1e-25
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 186 IQKESTLHLV 215
IQ +S LHL+
Sbjct: 146 IQNDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 186 IQKESTLHLV 215
+++ S LHLV
Sbjct: 61 LERGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 67.3 bits (157), Expect = 6e-12
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 149
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 186 IQKESTL 206
I+ ++ L
Sbjct: 201 IKPDANL 207
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVK 86
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/71 (40%), Positives = 47/71 (66%)
Frame = +3
Query: 3 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 182
T+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y
Sbjct: 23 TLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEY 82
Query: 183 NIQKESTLHLV 215
+++ TLHL+
Sbjct: 83 HLENGHTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/71 (40%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 182
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 183 NIQKESTLHLV 215
+I+++++L LV
Sbjct: 155 SIEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 179
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 180 YNIQKES 200
N+ + S
Sbjct: 61 NNVVENS 67
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 50.4 bits (115), Expect = 8e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 197
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 198 STLHLV 215
T+H+V
Sbjct: 82 HTIHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 186 IQKESTLHL 212
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 197
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 198 STLHLV 215
T+H+V
Sbjct: 82 HTVHMV 87
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 176
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 177 DYNIQKES 200
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 176
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 177 DYNIQKES 200
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/70 (31%), Positives = 43/70 (61%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 186 IQKESTLHLV 215
++ + L ++
Sbjct: 61 VKDDDLLMMM 70
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 182
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 183 NIQKESTLHLV 215
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 176
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 177 DYNIQKESTL 206
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 176
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 177 DYNIQKESTL 206
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 176
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 177 DYNIQKESTL 206
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 176
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 177 DYNIQKESTL 206
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 47.2 bits (107), Expect = 7e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 186 IQKESTL 206
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 186 IQKESTLHL 212
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 191
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 192 KESTLHLV 215
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 191
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 192 KESTLHLV 215
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 179
TM+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 499 TMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAE 558
Query: 180 YNIQKESTLHLV 215
N+Q S +HL+
Sbjct: 559 QNVQPNSLVHLL 570
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 179
+M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 180 YNIQKESTLHLV 215
N+Q S +HL+
Sbjct: 720 QNVQPNSLVHLI 731
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 182
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 183 NIQKESTLHLV 215
Q ++T++LV
Sbjct: 67 --QPDATVNLV 75
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 43.6 bits (98), Expect = 9e-05
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 176
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 177 DYNIQKESTLHL 212
DY I+ H+
Sbjct: 61 DYKIKACDIFHM 72
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 186 IQKESTLHL 212
I S + L
Sbjct: 61 ILNHSRIQL 69
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = +3
Query: 3 TMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 182
T+++ VK GK+I L V P T++++K+++Q + P Q+LIF GK L + TL
Sbjct: 535 TIKLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQS 593
Query: 183 NIQKESTLHLV 215
++ + L L+
Sbjct: 594 DVGSGAKLMLM 604
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSDY 182
I V+T+ GK L VE S + VK +I KE GIP D + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 183 NIQKESTLHLV 215
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 176
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 177 DYNIQKESTLHLV 215
+ +S + ++
Sbjct: 61 ANKVFDKSVIAII 73
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 186 IQKESTLHL 212
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 182
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 183 NIQKESTLHLV 215
Q ++T++LV
Sbjct: 67 --QSDTTMNLV 75
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 185
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 186 IQKESTLHL 212
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 119
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVK 86
M+I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 161
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 146
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 6 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 146
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 34.7 bits (76), Expect = 0.041
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 9 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 170
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.3 bits (75), Expect = 0.054
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 48 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 161
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 27 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 122
L+ K I +E++P D IE +K I+++ GIP D
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIPSD 81
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 33.5 bits (73), Expect = 0.095
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 12 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYN 185
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 186 IQKESTLHLV 215
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 18 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 161
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +3
Query: 48 LEVEPSD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 206
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 57 EPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 212
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +3
Query: 63 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSD 179
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At3g49055.1 68416.m05359 hypothetical protein
Length = 480
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 400 WP*WRTGTTAA-SATVRWSSRTTTNRPL 480
WP WR T A+ +AT SS T+NR L
Sbjct: 448 WPMWRFPTAASTAATATGSSSYTSNRAL 475
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 36 KTITL-EVEPSD--TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 206
KTI + E EP D T+E+ AK + EG + I + DG D+ +Q+ S+
Sbjct: 100 KTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSF 159
Query: 207 HLV 215
+V
Sbjct: 160 QMV 162
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,467,899
Number of Sequences: 28952
Number of extensions: 191983
Number of successful extensions: 594
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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