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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K06
         (544 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    51   6e-07
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    51   6e-07
U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    48   6e-06
U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    48   6e-06
U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    48   6e-06
U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein ...    48   6e-06
AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or cys...    48   6e-06
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    48   6e-06
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    48   6e-06
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    48   6e-06
AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or cys...    42   4e-04
AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin prote...    42   4e-04
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    38   0.005
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    38   0.005
U41746-6|AAA83333.1|  388|Caenorhabditis elegans Mediator protei...    31   0.71 
Z83238-11|CAE11318.1|  326|Caenorhabditis elegans Hypothetical p...    28   3.8  
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ...    28   5.0  
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport...    28   5.0  
U97551-5|AAB52858.1|  169|Caenorhabditis elegans Groundhog (hedg...    27   8.7  
U21308-9|AAW57822.1|  787|Caenorhabditis elegans Nfi (nuclear fa...    27   8.7  
U21308-8|AAN60509.2|  807|Caenorhabditis elegans Nfi (nuclear fa...    27   8.7  
U21308-7|AAW57823.1|  823|Caenorhabditis elegans Nfi (nuclear fa...    27   8.7  

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 50.8 bits (116), Expect = 6e-07
 Identities = 22/119 (18%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
 Frame = +2

Query: 113 KYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXX 289
           ++  +++ +G  D GV  +    +F++    +++ + + V+    +    L +       
Sbjct: 63  EFSGLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAA 122

Query: 290 XXINDFVRSATHEAIDEIVTPSELDGVLLVLIDALYFKGNWRVLFPYENTESSPFYNTK 466
             +N FV + T+  I +++     +     L++A+YFK +W+  F  E+T    F+ ++
Sbjct: 123 KTMNTFVENHTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSE 181


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 50.8 bits (116), Expect = 6e-07
 Identities = 22/119 (18%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
 Frame = +2

Query: 113 KYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXX 289
           ++  +++ +G  D GV  +    +F++    +++ + + V+    +    L +       
Sbjct: 63  EFSGLMEAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAA 122

Query: 290 XXINDFVRSATHEAIDEIVTPSELDGVLLVLIDALYFKGNWRVLFPYENTESSPFYNTK 466
             +N FV + T+  I +++     +     L++A+YFK +W+  F  E+T    F+ ++
Sbjct: 123 KTMNTFVENHTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSE 181


>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEIN-TVLRLHPHVCFNRKYFNILKEIGKNDGGV-LEHSGA 178
           LS    LS +   A  ET DEI   +L         + + NI   +   + G  +  +  
Sbjct: 39  LSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANH 98

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +F      + + +  DV+    +  ++L +         IN+FV   T   I +I+ P  
Sbjct: 99  IFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDS 158

Query: 359 LDGVLL-VLIDALYFKGNWRVLFPYENTESSPFYNTKGNQ 475
           +   L+ VL +A YFK NW+  F  E+T    F++++ ++
Sbjct: 159 ISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSENSK 198


>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEINTVL-RLHPHVCFNRKYFNILKEIGKNDGGV-LEHSGA 178
           LS    LS +   A  ET D+I   L +        + + NI   +   + G  ++ +  
Sbjct: 30  LSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLANH 89

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +F  +   + + +  DV+    +  + L +         IN+FVR  T + I +I+    
Sbjct: 90  VFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDS 149

Query: 359 LDGVLL-VLIDALYFKGNWRVLFPYENTESSPFYNT 463
           ++  L+ VL +ALYFK +W+  F  ++T  S F+++
Sbjct: 150 INSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSS 185


>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEINTVL-RLHPHVCFNRKYFNILKEIGKNDGGV-LEHSGA 178
           LS    LS +   A  ET D+I   L +        + + NI   +   + G  ++ +  
Sbjct: 30  LSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLANH 89

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +F  +   + + +  DV+    +  + L +         IN+FVR  T + I +I+    
Sbjct: 90  VFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDS 149

Query: 359 LDGVLL-VLIDALYFKGNWRVLFPYENTESSPFYNT 463
           ++  L+ VL +ALYFK +W+  F  ++T  S F+++
Sbjct: 150 INSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSS 185


>U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein 7,
           isoform c protein.
          Length = 365

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEINTVL-RLHPHVCFNRKYFNILKEIGKNDGGV-LEHSGA 178
           LS    LS +   A  ET D+I   L +        + + NI   +   + G  ++ +  
Sbjct: 30  LSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLANH 89

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +F  +   + + +  DV+    +  + L +         IN+FVR  T + I +I+    
Sbjct: 90  VFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDS 149

Query: 359 LDGVLL-VLIDALYFKGNWRVLFPYENTESSPFYNT 463
           ++  L+ VL +ALYFK +W+  F  ++T  S F+++
Sbjct: 150 INSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSS 185


>AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 365

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEINTVL-RLHPHVCFNRKYFNILKEIGKNDGGV-LEHSGA 178
           LS    LS +   A  ET D+I   L +        + + NI   +   + G  ++ +  
Sbjct: 30  LSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLANH 89

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +F  +   + + +  DV+    +  + L +         IN+FVR  T + I +I+    
Sbjct: 90  VFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDS 149

Query: 359 LDGVLL-VLIDALYFKGNWRVLFPYENTESSPFYNT 463
           ++  L+ VL +ALYFK +W+  F  ++T  S F+++
Sbjct: 150 INSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSS 185


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEINTVL-RLHPHVCFNRKYFNILKEIGKNDGGV-LEHSGA 178
           LS    LS +   A  ET D+I   L +        + + NI   +   + G  ++ +  
Sbjct: 30  LSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLANH 89

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +F  +   + + +  DV+    +  + L +         IN+FVR  T + I +I+    
Sbjct: 90  VFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDS 149

Query: 359 LDGVLL-VLIDALYFKGNWRVLFPYENTESSPFYNT 463
           ++  L+ VL +ALYFK +W+  F  ++T  S F+++
Sbjct: 150 INSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSS 185


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEINTVL-RLHPHVCFNRKYFNILKEIGKNDGGV-LEHSGA 178
           LS    LS +   A  ET D+I   L +        + + NI   +   + G  ++ +  
Sbjct: 30  LSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLANH 89

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +F  +   + + +  DV+    +  + L +         IN+FVR  T + I +I+    
Sbjct: 90  VFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDS 149

Query: 359 LDGVLL-VLIDALYFKGNWRVLFPYENTESSPFYNT 463
           ++  L+ VL +ALYFK +W+  F  ++T  S F+++
Sbjct: 150 INSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSS 185


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEIN-TVLRLHPHVCFNRKYFNILKEIGKNDGGV-LEHSGA 178
           LS    LS +   A  ET DEI   +L         + + NI   +   + G  +  +  
Sbjct: 39  LSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANH 98

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +F      + + +  DV+    +  ++L +         IN+FV   T   I +I+ P  
Sbjct: 99  IFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDS 158

Query: 359 LDGVLL-VLIDALYFKGNWRVLFPYENTESSPFYNTKGNQ 475
           +   L+ VL +A YFK NW+  F  E+T    F++++ ++
Sbjct: 159 ISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSENSK 198


>AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 23/103 (22%), Positives = 48/103 (46%)
 Frame = +2

Query: 116 YFNILKEIGKNDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXX 295
           + N L     ND   L  +  +F+  +  + + F  +++    +E   + +         
Sbjct: 76  FINKLLNSSVNDVETLI-ANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKI 134

Query: 296 INDFVRSATHEAIDEIVTPSELDGVLLVLIDALYFKGNWRVLF 424
           +N F+  +T   I +++ P  L  V  +LI+A++F+G+WR  F
Sbjct: 135 MNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKF 177


>AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin protein
           1 protein.
          Length = 366

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 23/103 (22%), Positives = 48/103 (46%)
 Frame = +2

Query: 116 YFNILKEIGKNDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXX 295
           + N L     ND   L  +  +F+  +  + + F  +++    +E   + +         
Sbjct: 76  FINKLLNSSVNDVETLI-ANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKI 134

Query: 296 INDFVRSATHEAIDEIVTPSELDGVLLVLIDALYFKGNWRVLF 424
           +N F+  +T   I +++ P  L  V  +LI+A++F+G+WR  F
Sbjct: 135 MNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKF 177


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCFNRKYFNILKEIGKNDGGVLEH-SGA 178
           LS   +LS +  G    + D+I NT+L           +  + KE+     GV  + +  
Sbjct: 29  LSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKGVEVYLANK 88

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +++     V   F         ++   L           IN FV +AT+  I  I T   
Sbjct: 89  VYLKKGFTVNPTFLSTALKNYGADAKSLD-LTTPAAVQEINSFVNTATNGKIKNIATQDS 147

Query: 359 LDGVLLVLIDALYFKGNW 412
           +   + +LI+++YFK +W
Sbjct: 148 IKDAIALLINSIYFKADW 165


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
 Frame = +2

Query: 5   LSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCFNRKYFNILKEIGKNDGGVLEH-SGA 178
           LS   +LS +  G    + D+I NT+L           +  + KE+     GV  + +  
Sbjct: 29  LSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKGVEVYLANK 88

Query: 179 MFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVTPSE 358
           +++     V   F         ++   L           IN FV +AT+  I  I T   
Sbjct: 89  VYLKKGFTVNPTFLSTALKNYGADAKSLD-LTTPAAVQEINSFVNTATNGKIKNIATQDS 147

Query: 359 LDGVLLVLIDALYFKGNW 412
           +   + +LI+++YFK +W
Sbjct: 148 IKDAIALLINSIYFKADW 165


>U41746-6|AAA83333.1|  388|Caenorhabditis elegans Mediator protein
           27 protein.
          Length = 388

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 358 FTRCYYFINSFVSCRSNEIVYCSRGSRVIVPR*FINFRNSCIL 230
           F +C  +I S+V+C S +  YC +  R  +P   +   +S I+
Sbjct: 335 FAQCNNYIQSYVNCFSTKCYYCKKHLRQFMPPTVVTRESSPII 377


>Z83238-11|CAE11318.1|  326|Caenorhabditis elegans Hypothetical
           protein T08G3.12 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -2

Query: 162 KTPPSFLPISFKILKYFLLKHTCGCSLSTVLISSKVSSAAPNDSVDRIAHADSP 1
           KTP +  P+ F IL   +       +LST+ I   + SAA   S   +A+   P
Sbjct: 40  KTPKTLQPVKFSILVMHITCFWLDFNLSTLSIPYLIYSAAAGQSFGILAYLKIP 93


>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
           related protein 2 protein.
          Length = 1272

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 47  AEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDG 154
           AEETF  I TV  L+ H     +++N L E+G+  G
Sbjct: 260 AEETFSSIRTVHSLNGHKRELDRFYNAL-EVGRQTG 294


>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
           PGP-2 protein.
          Length = 1272

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 47  AEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDG 154
           AEETF  I TV  L+ H     +++N L E+G+  G
Sbjct: 260 AEETFSSIRTVHSLNGHKRELDRFYNAL-EVGRQTG 294


>U97551-5|AAB52858.1|  169|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 4 protein.
          Length = 169

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 509 CPSRTSD*HSLSGYLSCCKMGSIQYFRKGITPSNY 405
           CPS  S  H+ SG L CC        ++GI   +Y
Sbjct: 22  CPSMKSRKHAKSGDLYCCDSTIKTVIKRGIRTLSY 56


>U21308-9|AAW57822.1|  787|Caenorhabditis elegans Nfi (nuclear
           factor i) family protein1, isoform b protein.
          Length = 787

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 83  RLHPHVCFNRKYFNILKEIGKNDGGV 160
           R+HPH   + ++ N  +E+ KN+G +
Sbjct: 491 RMHPHTSNSFEFLNCNQEMNKNEGAL 516


>U21308-8|AAN60509.2|  807|Caenorhabditis elegans Nfi (nuclear
           factor i) family protein1, isoform a protein.
          Length = 807

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 83  RLHPHVCFNRKYFNILKEIGKNDGGV 160
           R+HPH   + ++ N  +E+ KN+G +
Sbjct: 511 RMHPHTSNSFEFLNCNQEMNKNEGAL 536


>U21308-7|AAW57823.1|  823|Caenorhabditis elegans Nfi (nuclear
           factor i) family protein1, isoform c protein.
          Length = 823

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 83  RLHPHVCFNRKYFNILKEIGKNDGGV 160
           R+HPH   + ++ N  +E+ KN+G +
Sbjct: 527 RMHPHTSNSFEFLNCNQEMNKNEGAL 552


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,120,431
Number of Sequences: 27780
Number of extensions: 244453
Number of successful extensions: 580
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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