Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K06
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.1  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          21   8.1  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   8.1  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +2

Query: 146 NDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPW 268
           +DG   E  G + +  + N  + F++   N  V      PW
Sbjct: 385 SDGNEAEVEGTLSVQPQANPVKGFEEYFLNLTVENNRRNPW 425


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 498 YIRLTFPIWLP 466
           ++R  FP WLP
Sbjct: 235 FLRQAFPFWLP 245


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 498 YIRLTFPIWLP 466
           ++R  FP WLP
Sbjct: 235 FLRQAFPFWLP 245


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 472 VTFRVVKWARFSIFVR 425
           +TF V KW++  I VR
Sbjct: 46  ITFGVNKWSKVCIVVR 61


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 455 YNTKGNQIGNVNLMYVTGTFNMTSVEQI 538
           YN   N   N N  Y    +N+  +EQI
Sbjct: 334 YNNYNNYNNNYNNNYKKLYYNINYIEQI 361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,405
Number of Sequences: 438
Number of extensions: 3327
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)