Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K05
         (457 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00032-6|AAA50634.1|  389|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z81458-1|CAB03820.1|  274|Caenorhabditis elegans Hypothetical pr...    28   3.7  
AF025453-2|AAM98052.1|  225|Caenorhabditis elegans Hypothetical ...    27   4.9  
AF025453-1|AAK31407.1|  520|Caenorhabditis elegans Hypothetical ...    27   4.9  
Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z68315-5|CAE48501.1|  689|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U00032-6|AAA50634.1|  389|Caenorhabditis elegans Hypothetical
           protein F37A4.6 protein.
          Length = 389

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 116 SNRSDSLKQTDRQNILNCSYVIGTVYIIRAHVFSKKMFFANTTGFNKNSYYMLKFNWD 289
           +  SDS+     Q+IL   Y + T+Y I++H  S K           NS ++L  + D
Sbjct: 45  NGNSDSIDYALLQDILYEGYRLSTIYNIKSHTKSMKRLRRKLASIFSNSNFLLPLSKD 102


>Z81458-1|CAB03820.1|  274|Caenorhabditis elegans Hypothetical
           protein C03E10.1 protein.
          Length = 274

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +2

Query: 17  YLATFILRIYLGFSVKK*PNSAV*IQLSAKKNWSNRSDSLKQTDRQNILNCSYVIGTVYI 196
           YL++F+L I+L FS K      +      K+   + S  L Q+    IL C+ +I T+  
Sbjct: 153 YLSSFLLEIFLYFSAKNRYYKTIGQMCLTKRYMLSESFELCQSSFNAIL-CALLINTLLF 211

Query: 197 IRAHVF 214
           +   +F
Sbjct: 212 VSFWLF 217


>AF025453-2|AAM98052.1|  225|Caenorhabditis elegans Hypothetical
           protein C08F1.4b protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +2

Query: 128 DSLKQTDRQNILNCSYVIGTVYIIRAH-----VFSKKMFFANTTGFNKNSYY 268
           +SLK+  R + +   YVI   +II AH     +  KK F  N   + K  +Y
Sbjct: 140 ESLKKVIRWDDMMTDYVINDSFIIEAHIEILRIIEKKNFSPNWLSYMKPVFY 191


>AF025453-1|AAK31407.1|  520|Caenorhabditis elegans Hypothetical
           protein C08F1.4a protein.
          Length = 520

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +2

Query: 128 DSLKQTDRQNILNCSYVIGTVYIIRAH-----VFSKKMFFANTTGFNKNSYY 268
           +SLK+  R + +   YVI   +II AH     +  KK F  N   + K  +Y
Sbjct: 140 ESLKKVIRWDDMMTDYVINDSFIIEAHIEILRIIEKKNFSPNWLSYMKPVFY 191


>Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical
           protein C44H4.2 protein.
          Length = 738

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 360 PTSPPNSRVATLLALSNSTLCYFNIHV 440
           P S  NSRV T+L   N  +C  N+H+
Sbjct: 380 PYSAFNSRVGTVLLKENPLVCTENLHM 406


>Z68315-5|CAE48501.1|  689|Caenorhabditis elegans Hypothetical
           protein F28C6.4b protein.
          Length = 689

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +2

Query: 107 KNWSNRSDSLKQTDRQNILNCSYVIGTVYIIRAHVFSKKMFFANTTGFNKNSYYMLKFN 283
           KN+ N+ DSLKQ  R   ++ S  I  V+ +   + S  +   N    ++  Y+  + N
Sbjct: 287 KNYGNQDDSLKQPPRIEQIDVSSTIFDVFNMPIPIESYGISLINYFSDDEEEYFEKQHN 345


>Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical
           protein F28C6.4a protein.
          Length = 745

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +2

Query: 107 KNWSNRSDSLKQTDRQNILNCSYVIGTVYIIRAHVFSKKMFFANTTGFNKNSYYMLKFN 283
           KN+ N+ DSLKQ  R   ++ S  I  V+ +   + S  +   N    ++  Y+  + N
Sbjct: 287 KNYGNQDDSLKQPPRIEQIDVSSTIFDVFNMPIPIESYGISLINYFSDDEEEYFEKQHN 345


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,824,546
Number of Sequences: 27780
Number of extensions: 227786
Number of successful extensions: 444
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)