Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K05
         (457 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   2.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.4  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 367 DVGPAPSDNTIRLPY 323
           +  P PSD+T+ +PY
Sbjct: 128 EYSPDPSDSTMAIPY 142


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 353 TIG*HNTVTILFLIHHKNEFKYPN 282
           TI  H+T +  F+ H++NE +  N
Sbjct: 358 TIVDHHTASESFMKHYENEMRLRN 381


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 316 KNNMVTVLCYPMV 354
           ++++VT LCYP V
Sbjct: 305 ESDLVTFLCYPSV 317


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 316 KNNMVTVLCYPMV 354
           ++++VT LCYP V
Sbjct: 305 ESDLVTFLCYPSV 317


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 104 KKNWSNRSDSLKQTDRQNILNCS 172
           ++ W N ++S  Q    NI++CS
Sbjct: 343 EEEWENENESDYQDAFCNIVSCS 365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,654
Number of Sequences: 438
Number of extensions: 2784
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)