Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_K02
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 122 5e-29
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 81 9e-17
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 58 8e-10
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 42 9e-05
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 38 0.002
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 37 0.002
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 35 0.011
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 32 0.057
SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit Dpb3|Schizosa... 27 2.1
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 26 5.0
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 5.0
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 25 6.5
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 25 8.7
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 25 8.7
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 122 bits (293), Expect = 5e-29
Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Frame = +2
Query: 20 ARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVA 199
A +IA + M KY T EL+A A+ +FV F G L+ + S+ +P + + + LVA
Sbjct: 305 AFVIANLKSMLKYPFPTTELTAKAMTKFVGDFVDGKLQPKIKSQPIPE--SQEDLVVLVA 362
Query: 200 TNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEH 379
NFD+IV D K VLVEFYAPWCGHCK L P Y+KL E + T N++
Sbjct: 363 DNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDIS- 421
Query: 380 TKITSFPTIKLYTKDNQVRD--YXGERTLAGLTKFVETDGEGAEPV----PTVSEYDEEE 541
I+ FPTI + +++V Y G+RTL L+ F++ EP+ +V D E+
Sbjct: 422 VSISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHA-SFEPIKKEKESVPAPDLED 480
Query: 542 DVPTRDEL 565
V DE+
Sbjct: 481 QVAVEDEM 488
Score = 60.1 bits (139), Expect = 2e-10
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANEL-EHTKITSFPTI 406
+K ++V+FYAPWCGHCK L P Y+ + E +L I +PT+
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 407 KLYTKDNQVRDYXGERTLAGLTKFV 481
++ Q+ Y G R L K++
Sbjct: 99 NVFKNGKQISQYSGPRKHDALVKYM 123
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 81.4 bits (192), Expect = 9e-17
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHF--EXXXXXXXXXXX 355
V L + NFD++V D K VLVEFYA WCG+CK+L P Y+ LG+ F E
Sbjct: 142 VVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINAD 201
Query: 356 XTANELEHTKITSFPTIKLYTKDNQVRD--YXGERTLAGLTKFVETDGEGAEPVPTVSEY 529
A+ ++ SFPTIK + KD++ + Y G+R+L L +++ G + P +
Sbjct: 202 VFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKK-SGTQRSPDGTLL 260
Query: 530 DEEEDVPTRDE 562
+PT DE
Sbjct: 261 STAGRIPTFDE 271
Score = 60.9 bits (141), Expect = 1e-10
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 227 TNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE--LEHTKITSFP 400
+ K L+EFYA WCGHCK L P+Y++LG FE + + IT FP
Sbjct: 38 SKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFP 97
Query: 401 TIKLYTKD-NQVRDYXGERTLAGLTKFV 481
T+ + D ++ Y R + LT+FV
Sbjct: 98 TLIWFPPDGSEPVQYSNARDVDSLTQFV 125
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 58.4 bits (135), Expect = 8e-10
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +2
Query: 242 LVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE--LEHTKITSFPTIKLY 415
LV FYAPWCG+CK+LVP Y KL + N ++ FPTIKL
Sbjct: 52 LVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLV 111
Query: 416 ---TKDNQV--RDYXGERTLAGLTKFV 481
+K + + DY G+R+ L KFV
Sbjct: 112 YPSSKGSSLSSTDYNGDRSYKSLQKFV 138
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 41.5 bits (93), Expect = 9e-05
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIK 409
+K +V+FYA WCG CK L P +KL E + ++ + + + PT+
Sbjct: 35 DKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKF-SDIAQKNGVYALPTMV 93
Query: 410 LYTKDNQVRDYXGE--RTLAGL 469
L+ K ++ G +TL+ L
Sbjct: 94 LFRKGQELDRIVGADVKTLSSL 115
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 37.5 bits (83), Expect = 0.002
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Frame = +2
Query: 245 VEFYAPWCGHCKQLVPIYDKLGEHF--EXXXXXXXXXXXXTANELEH-TKITSFPTIKLY 415
+++Y P CG CK+L P++D + E + + EL I + PT+ LY
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLY 106
Query: 416 TKDNQVRD--YXGERTLAGLTKFVETDGEGAEPVPTVSEYDEEEDVPTRDEL*ALGTVSA 589
V + + + A L FVET P T + +EDV T ++ + ++
Sbjct: 107 QNGEIVEEVPFGASTSEASLLDFVETH---LNP-DTDPDIPSDEDVLTDEDTEEVASIQP 162
Query: 590 TLS 598
LS
Sbjct: 163 ALS 165
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +2
Query: 197 ATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELE 376
++ F IV +K V+V+F+A WCG CK + P +++ + + E
Sbjct: 8 SSEFKSIVCQ-DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAE 66
Query: 377 HTKITSFPTIKLYTKDNQVRDYXG 448
+ + P+ LY ++ + G
Sbjct: 67 -AGVHAMPSFFLYKNGEKIEEIVG 89
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 34.7 bits (76), Expect = 0.011
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKV-LVEFYAPWCGHCKQLVPIYDKLGE 313
V+ F EI+ + +++ L+ FYAPW CKQ+ ++D+ +
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAK 47
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 32.3 bits (70), Expect = 0.057
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 245 VEFYAPWCGHCKQLVPIYDKLGEHF 319
V+ YA WCG CK + P++ +L +
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKY 48
>SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit
Dpb3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 2 KEEVPAARL---IALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSE 151
K P AR+ + +QD+ K T + + A+E F+QS + KQ L +
Sbjct: 21 KSRFPVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQSIIQESCKQTRLHQ 73
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEH 316
V T A +E+ + +EF A W GH + +P Y L H
Sbjct: 969 VPTFYADYVNEVKRIIQRNANLEFEAIWKGHSENKIP-YTSLSNH 1012
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +2
Query: 71 DELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVL 244
++ + N+ + +Q + T +HL + L + P KT + NF+EI + + + L
Sbjct: 187 EQETENSSTKDLQVYDFQTASEHLPEQSLQNTTYYDPSKTYSSVNFEEIEYGKSHEKL 244
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 434 RDYXGERTLAGLTKFVETDGEGAEPVPTVSEYDEEEDVPTRDE 562
+D E T ETD E V TV E +EE ++E
Sbjct: 223 KDENEENKETSTTNVAETDAPEEETVDTVEEIADEEKHSVKEE 265
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 182 VKTLVAT-NFDEIVFDTNKKVLVEFYAPW 265
++ L+ T +FD + DT K V EFY P+
Sbjct: 206 IRDLIQTYHFDGLRIDTAKHVQKEFYPPF 234
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 395 FPTIKLYTKDNQVRDYXGERTLAGLTKFVE 484
FPT+ +Q+ +Y GE GL ++E
Sbjct: 526 FPTVYFTKISDQINNYEGELPTDGLKYYIE 555
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,140,298
Number of Sequences: 5004
Number of extensions: 37764
Number of successful extensions: 129
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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