Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_K02
(610 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 183 1e-46
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 98 4e-21
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 77 1e-14
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 63 2e-10
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 62 3e-10
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 55 4e-08
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 54 1e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 46 2e-05
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 46 3e-05
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 45 6e-05
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 42 3e-04
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 39 0.003
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 35 0.045
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.045
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 35 0.059
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 28 5.1
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_18738| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 28 6.8
SB_51770| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23) 27 9.0
SB_5078| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23) 27 9.0
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 183 bits (445), Expect = 1e-46
Identities = 90/189 (47%), Positives = 118/189 (62%), Gaps = 5/189 (2%)
Frame = +2
Query: 8 EVPAARLIAL-EQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPV 184
E+P RLI L + DM KYKPT E+++ V+EFVQ+F LK HLLS ++P DW +KPV
Sbjct: 327 ELPTIRLINLADDDMTKYKPTAAEITSENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPV 386
Query: 185 KTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTA 364
K L NFDE+ + +K V VEFYAPWCGHCKQL PI+D+LGE ++ TA
Sbjct: 387 KVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTA 446
Query: 365 NELEHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGE-GAEPVPTVSE---YD 532
NE+E K+ SFPTIK + K+ + DY G RTL KF+E+ G+ G EP E
Sbjct: 447 NEVEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGKAGNEPAAEGEEPPPEG 506
Query: 533 EEEDVPTRD 559
E +D+P +
Sbjct: 507 EGDDLPPEE 515
Score = 70.5 bits (165), Expect = 1e-12
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 361
V L NFDE V NK VLVEFYAPWCGHCK L P Y K +
Sbjct: 26 VLVLTEKNFDEAVA-ANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDA 84
Query: 362 ANEL---EHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGAEPVPTVSEYD 532
E E ++ +PTIK + KD + +Y G RT + ++ + + P ++ D
Sbjct: 85 TAETKLGEKFQVQGYPTIKFF-KDGKPSEYAGGRTAPEIVSWL--NKKTGPPAKDLATAD 141
Query: 533 EEEDVPTRD 559
+D T++
Sbjct: 142 AMKDFITKE 150
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 98.7 bits (235), Expect = 3e-21
Identities = 59/145 (40%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Frame = +2
Query: 62 PTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKV 241
P +E S +++ EFV+ F AG LK + S+ +P +PV +V FDEIV D K V
Sbjct: 488 PDEEEFSEDSLREFVEEFKAGNLKPIIKSQPVPKS-NKEPVTVVVGKTFDEIVNDPKKDV 546
Query: 242 LVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHT-KITSFPTIKLYT 418
L+EFYAPWCG L P + KLG+HF TAN++ T + FPTI T
Sbjct: 547 LIEFYAPWCGIA--LEPTFKKLGKHFRNDKNIVIAKIDATANDVPSTYAVEGFPTIYFAT 604
Query: 419 ---KDNQVRDYXGERTLAGLTKFVE 484
K N ++ + G R L L KFVE
Sbjct: 605 SKDKKNPIK-FDGGRELKDLIKFVE 628
Score = 68.9 bits (161), Expect = 3e-12
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Frame = +2
Query: 2 KEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKP 181
K + A IA D++ Y PT E+ + +++ + P+ W P
Sbjct: 118 KMDATVASDIAQRFDVSGY-PTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPN-WKPPP 175
Query: 182 VKTLVAT--NFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXX--XXXXXX 349
V L T NF E+V + +LVEF+APWCGHCKQL P Y+K + +
Sbjct: 176 VAALTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIV 234
Query: 350 XXXTANEL-EHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVET 487
+EL + ++ +PT+K++ K + +Y G+R G+ ++ +
Sbjct: 235 DATIESELAQKYEVQGYPTLKVFRK-GKATEYKGQRDQYGIASYMRS 280
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXX--XXXXXXXX 355
V L + NFD ++ + N +LVEFYAPWCGHCK L P Y K + +
Sbjct: 63 VSVLNSKNFDRVI-EENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDA 121
Query: 356 XTANEL-EHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGAEPVPTVS 523
A+++ + ++ +PT+K++ K +Y G R +G+ ++++ + P V+
Sbjct: 122 TVASDIAQRFDVSGYPTLKIFRKGTPY-EYEGPREESGIVEYMKKQSDPNWKPPPVA 177
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 98.3 bits (234), Expect = 4e-21
Identities = 45/100 (45%), Positives = 62/100 (62%)
Frame = +2
Query: 71 DELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVE 250
++ S ++ ++F++ +FAG+LK H+ SE LP PVK +V NF EIV D K VL+E
Sbjct: 828 EKFSVDSFKQFLEDYFAGSLKPHIKSEPLPESNDG-PVKVVVGENFKEIVNDPTKDVLIE 886
Query: 251 FYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE 370
FYAPWCGHCK L P Y++LGE + TAN+
Sbjct: 887 FYAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMDATAND 926
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Frame = +2
Query: 239 VLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHT----KITSFPTI 406
+LVEF+APWCGHCK+L P Y+ E + + T ++ +PT+
Sbjct: 558 MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTL 617
Query: 407 KLYTKDNQVRDYXGERTLAGLTKFVETD-GEGAEPVPTVSEYDEEED 544
K++ +DY G R +G+ ++++ G + + +V +++ D
Sbjct: 618 KIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPSSVEIKSVDHLEKKLD 664
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 77.0 bits (181), Expect = 1e-14
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Frame = +2
Query: 191 LVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTAN- 367
L NFDE+V + K LVEFYAPWCGHCKQL P Y++LGE + +
Sbjct: 27 LTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDR 85
Query: 368 EL-EHTKITSFPTIKLYTKDNQV-RDYXGERTLAGLTKFVE--TDGEGAEPV--PTVSEY 529
+L + FPTIK + K + +Y G R + KF+E T G PV V++
Sbjct: 86 DLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTGVRGRVPVIPSAVADL 145
Query: 530 DE 535
DE
Sbjct: 146 DE 147
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 361
V L TNF++ V ++ LVEF+APWCGHC++L P + K +
Sbjct: 81 VVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVH 140
Query: 362 ANELEHTKITSFPTIKLYT----KDNQVRDYXGERTLAGLTKF-VETDGEGAEPVPTVSE 526
++ +PTIK++ + V DY G RT + + ++ ++ + EP +
Sbjct: 141 TVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAADSIEPPEVIQA 200
Query: 527 YDEE 538
E
Sbjct: 201 ISNE 204
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 386 ITSFPTIKLY-TKDNQVRDYXGERTLAGL 469
I FPTIK++ N +DY G+RT G+
Sbjct: 13 IRGFPTIKIFGANKNSPQDYNGQRTAQGI 41
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 62.5 bits (145), Expect = 3e-10
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 361
VK L ++F + +T + VLV FYAPWCGHCK P Y+K E F+ T
Sbjct: 149 VKQLDGSDFWGYLNNT-EHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCT 207
Query: 362 --ANELEHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGAEPVPTVSEYDE 535
+ + ++ +PT++ Y V +Y G+R L F+E EP +S+ +
Sbjct: 208 KFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFME------EPPLPLSDIPK 261
Query: 536 EEDVPTRDEL 565
++ + EL
Sbjct: 262 DQQEKNKQEL 271
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Frame = +2
Query: 161 SDWAAKPVKTLVATN--FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGE--HFEXX 328
SDW+ K + T+ DE + +++ VLV ++APWCGHC ++ P Y K + H E
Sbjct: 43 SDWSKDDSKVVFLTDESHDEFI-KSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDA 101
Query: 329 XXXXXXXXXXTANEL-EHTKITSFPTIKLYTKDNQVRDYXGE 451
++ + + +PT+KLY N + E
Sbjct: 102 NCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAE 143
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Frame = +2
Query: 161 SDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXX 340
S +A V L A NFD+++ + + +LV+FYAPWC HC++L+P +
Sbjct: 15 SSGSANFVYDLNAQNFDQMIREKDI-MLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQ 73
Query: 341 XXXXXXTANE----LEHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVET-DGEGAE 505
T ++ KI +P++KL+ DY G+RT A L ++E+ ++
Sbjct: 74 FAKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQ 133
Query: 506 PVPTVSE 526
P SE
Sbjct: 134 QAPFTSE 140
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +2
Query: 245 VEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYTKD 424
V+FYAPWC HC +L PI+++L E F+ ++ +KI +PT+ L+
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFKDNA------------DITISKINGYPTLMLFKDG 158
Query: 425 NQVRDYXGERTLAGLTKFV 481
Q ++Y G R L L +F+
Sbjct: 159 VQKKEYSGNRDLDSLYRFI 177
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 361
V + +FD+IV + ++ VL+ FY PWCG C P+ + F+
Sbjct: 519 VTEVTTDSFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDAD 578
Query: 362 ANELE-HTKITSFPTIKLY---TKDNQVR-DYXGERTLAGLTKFVETDGEGA 502
N+L + ++S+P+I L+ KD+ + RT L +F+E G A
Sbjct: 579 QNDLPWNLTVSSYPSIILFPAGRKDSSIAFPSNTPRTATRLIEFIEEHGSEA 630
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 361
V L +F V ++ V+F+APWC C +L+P Y K F
Sbjct: 286 VHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTV 345
Query: 362 ANELEHT-KITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETD 490
++L H I S+PT LY ++Q + G + +FVE +
Sbjct: 346 HSQLCHQYNIRSYPTTILY-NNSQPHQFIGHHNALDIIEFVEVE 388
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 361
V + + NF V + +V+FYAPWCG C + P Y++L + +
Sbjct: 435 VSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQD 494
Query: 362 ANELEHTKITSFPTIKLY 415
I S+PT++LY
Sbjct: 495 YGLCSEANIHSYPTVRLY 512
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 164 DWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYD 301
D A+ V L NF+E + N+ VLV+FYAPWC C++L P++D
Sbjct: 47 DPASPAVLNLNDQNFNETI-KKNEYVLVDFYAPWCSDCQRLSPLFD 91
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Frame = +2
Query: 140 LLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 319
+ S+ +P D + L +NF+ V +K VLV+FYAPWC HCK++ P Y + +
Sbjct: 124 MASDGVPDD--EPTLLELDDSNFEPAV-QKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Query: 320 EXXXXXXXXXXXX--TANELEHTK------ITSFPTIKLYTKDNQVRDYXG-ERTLAGLT 472
+AN + K + PTI L+ V ++ G R +
Sbjct: 181 LILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNKKSIK 240
Query: 473 KFVETDGEGAEPVPTVSEYDEEEDVPTRDE 562
FV + A+P S+ +++ + + +
Sbjct: 241 GFVMDAVKEADPSMKFSDVPKKKKMKNQKQ 270
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 45.6 bits (103), Expect = 3e-05
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 239 VLVEFYAPWCGHCKQLVPIYDKLGE 313
+LVEF+APWCGHCK+L P Y+ E
Sbjct: 33 MLVEFFAPWCGHCKRLAPEYETAAE 57
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 206 FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIY 298
FD+ V N VLV FYAPWCGHCK + P Y
Sbjct: 92 FDDFVAK-NPSVLVMFYAPWCGHCKAMKPEY 121
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 164 DWAAKP--VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEH 316
+W+ P V L T F V K VLV FYAPWCGHCK+ P +H
Sbjct: 189 EWSEIPSEVYHLSDTTFKSFV-KKKKHVLVMFYAPWCGHCKKAKPELMSAAKH 240
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 176 KPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 319
K + N DE V D +K V + FYAPW HC++++ I+D++ + F
Sbjct: 26 KKIVEFTNENVDEYV-DGSKFVFIFFYAPWDDHCQRILQIFDQVADEF 72
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 179 PVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLV-PIY 298
P+ L +NF+ +V + K VLV +Y C C Q+ P Y
Sbjct: 145 PLIELEKSNFERVVKNRAKDVLVFYYNGNCKLCDQMAYPYY 185
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 179 PVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDK 304
P+ L +FD + D + +LV+FYAPWC C L P Y+K
Sbjct: 23 PIFELTDQDFDNFLKD-KEVMLVDFYAPWCSDCDNLRPKYEK 63
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +2
Query: 206 FDEIVFDTNKK-VLVEFYAPWCGHCKQLVPIYDKLG-EHFE 322
F+ ++ +T K V+++FYA WCG C+Q+ P + K+ E F+
Sbjct: 21 FNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFK 61
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 233 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTK-ITSFPTIK 409
K V+ +F A WCG CK + P+Y L E ++ EL + +T+ PT +
Sbjct: 28 KLVVADFTASWCGPCKSIAPVYSGLSEKYK--QAVFLKIDVDVCQELAAKQGVTAMPTFQ 85
Query: 410 LYTKDNQVRDYXGERTLAGLTKFVETDGEGAE 505
+ +V + G A + G+G E
Sbjct: 86 FFKNKVKVDEVRGADPKALEDAIKKWIGDGEE 117
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 35.1 bits (77), Expect = 0.045
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 TNFDEIVFDT-NKKVLVEFYAPWCGHCKQLVPIYDKLGE 313
T+FD I+ + N +V F+APW HC Q+ + ++L +
Sbjct: 10 TDFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAK 48
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 35.1 bits (77), Expect = 0.045
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 319
++ V+++F A WCG CK + P++ L F
Sbjct: 28 SRLVVIDFTATWCGPCKSIAPVFTNLSMKF 57
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 34.7 bits (76), Expect = 0.059
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 206 FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 322
FD+ + D N+ ++F A WCG C+ + P ++++ + F+
Sbjct: 4 FDKFLKD-NEVAAIDFTATWCGPCRMIGPKFEEMAKEFK 41
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 337 HHRQDRRYGQRAGAHQDHVVP-DHQTV 414
HHR RR+ GAHQ+ P DH V
Sbjct: 177 HHRHYRRWHNSNGAHQEWAQPVDHHAV 203
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 386 ITSFPTIKLYTKDNQVRDYXGERTLAGLTKFV 481
I +PT+ L+ Q ++Y G R L L +F+
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_18738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 396
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 71 DELSANAVEEFVQSFFAGTLKQHLLSEDLPS 163
D++ N V F ++ FAG K+H++ D+ S
Sbjct: 61 DKVDENQVMRFRRNIFAGVKKRHIMEMDMNS 91
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 265 PGGVEF--NENLLVSVKDDLIEVGGD*SLDGFSSPVRGQVLAQQVLFQSSSEERLHEFLN 92
P G EF N ++ + DLI G + + SSP+ + + L +SSS E E L+
Sbjct: 2338 PQGQEFGLNRRVVEELSTDLIGKGTNTFISTTSSPLSRSISESKELSESSSFESESELLD 2397
Query: 91 S 89
S
Sbjct: 2398 S 2398
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Frame = +2
Query: 233 KKVLVEFYAPWCGHCKQLVPI----YDKLG 310
K + V F A WC C+Q PI Y++LG
Sbjct: 26 KVIAVYFSAHWCPPCRQFTPILKDFYEELG 55
>SB_51770| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23)
Length = 216
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 449 ERTLAGLTKFVETDGEGAEPVPTVSEYDEEEDVPTRDEL*ALG 577
E L + ET GE E +PTV E D+E + D LG
Sbjct: 35 EELLQDAPEVDETSGEMTEDIPTVVEDDDENEEDGDDRRRNLG 77
>SB_5078| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23)
Length = 216
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 449 ERTLAGLTKFVETDGEGAEPVPTVSEYDEEEDVPTRDEL*ALG 577
E L + ET GE E +PTV E D+E + D LG
Sbjct: 35 EEILQDAPEVDETSGEMTEDIPTVVEDDDENEEDGDDRRRNLG 77
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 225 SKTISSKLVATKVLTGLAAQSEGRSSLNKCCFRVPAKN 112
+KT++ +L A + +Q EG S +N C FRVP N
Sbjct: 2530 TKTLTPELRARHRIEA-GSQIEGPSPVNTCGFRVPKMN 2566
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,705,831
Number of Sequences: 59808
Number of extensions: 299563
Number of successful extensions: 1110
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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