Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K02
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 467 LTKFVETDGEGAEPVPTVSEYDEEED 544
           L K  + DGEGA+      E +EEED
Sbjct: 266 LRKRRQNDGEGADDRDDDEENEEEED 291


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 30  SLSNKTWLSTNRPPMSLAL 86
           S +NKTWL  N    SL L
Sbjct: 437 SQTNKTWLPVNENYKSLNL 455


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = -3

Query: 227 CQRRSHRSWWRLK 189
           CQ   ++ WW +K
Sbjct: 359 CQNEMNKWWWNMK 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,267
Number of Sequences: 438
Number of extensions: 2639
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)