Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_K02
(610 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 102 2e-22
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 101 4e-22
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 99 1e-21
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 95 3e-20
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 92 2e-19
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 92 2e-19
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 92 3e-19
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 90 9e-19
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 75 3e-14
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 72 3e-13
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 70 1e-12
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 70 1e-12
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 55 3e-08
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 55 3e-08
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 55 3e-08
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 52 2e-07
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 52 4e-07
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 50 9e-07
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 50 2e-06
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 49 2e-06
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 45 3e-05
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 44 1e-04
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 43 1e-04
At3g03860.1 68416.m00398 expressed protein 40 0.001
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 40 0.001
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 40 0.001
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 39 0.002
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 39 0.003
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 38 0.007
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 37 0.009
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 37 0.009
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 37 0.009
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 37 0.012
At4g08930.1 68417.m01470 thioredoxin-related contains weak simil... 36 0.016
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 36 0.028
At1g34780.1 68414.m04329 protein disulfide isomerase-related con... 35 0.037
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 35 0.048
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 34 0.085
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 34 0.085
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 34 0.085
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 33 0.11
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 33 0.20
At3g62510.1 68416.m07023 protein disulfide isomerase-related con... 32 0.26
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 32 0.26
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 32 0.26
At2g22310.1 68415.m02647 ubiquitin-specific protease 4 (UBP4) id... 32 0.34
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 31 0.45
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 31 0.45
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 31 0.45
At5g64813.1 68418.m08152 GTP-binding protein-related contains we... 31 0.60
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 31 0.60
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 31 0.60
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 31 0.60
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 31 0.79
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 31 0.79
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 31 0.79
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 30 1.0
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 30 1.0
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 30 1.4
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 30 1.4
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 30 1.4
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 30 1.4
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 30 1.4
At1g49890.1 68414.m05593 expressed protein contains Pfam domain,... 29 2.4
At4g31240.2 68417.m04435 expressed protein 28 4.2
At4g31240.1 68417.m04434 expressed protein 28 4.2
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 28 5.6
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 27 7.4
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 27 7.4
At2g47220.1 68415.m05897 3' exoribonuclease family domain 1 prot... 27 7.4
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 27 7.4
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 27 7.4
At3g53700.1 68416.m05931 pentatricopeptide (PPR) repeat-containi... 27 9.7
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 102 bits (245), Expect = 2e-22
Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 13/188 (6%)
Frame = +2
Query: 41 QDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIV 220
+DM K+ EL+ N ++ + F A LK S+ LP + VK +V NFDEIV
Sbjct: 394 EDMRKFI-LDGELTVNNIKTLAEDFLADKLKPFYKSDPLPENNDGD-VKVIVGNNFDEIV 451
Query: 221 FDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFP 400
D +K VL+E YAPWCGHC+ PIY+KLG++ + T+NE K FP
Sbjct: 452 LDESKDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLVVAKMDGTSNEHPRAKADGFP 511
Query: 401 TIKLYTKDNQVRDYXG---ERTLAGLTKFVETDG-------EGAEPVPTVSEYDEEEDV- 547
TI + N+ D +RT+ L KF++ + A P P +S +E +
Sbjct: 512 TILFFPGGNKSFDPIAVDVDRTVVELYKFLKKHASIPFKLEKPATPEPVISTMKSDEKIE 571
Query: 548 --PTRDEL 565
++DEL
Sbjct: 572 GDSSKDEL 579
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/124 (28%), Positives = 54/124 (43%)
Frame = +2
Query: 176 KPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXX 355
K V L NF E V N +VEFYAPWCG C+ L P Y +
Sbjct: 99 KDVAVLTKDNFTEFV-GNNSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDAT 157
Query: 356 XTANELEHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGAEPVPTVSEYDE 535
+ + +I FPT+ L+ + Y GERT G+ +++ + + + ++ +E
Sbjct: 158 EEGDLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLKK--KASPSIHNITTKEE 215
Query: 536 EEDV 547
E V
Sbjct: 216 AERV 219
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 101 bits (242), Expect = 4e-22
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Frame = +2
Query: 5 EEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPV 184
EE +I D KY E+ + +E + + F G + H S+ +P++ +PV
Sbjct: 318 EESQVPLIIIQTPDNKKYLKVNVEV--DQIESWFKDFQDGKVAVHKKSQPIPAE-NNEPV 374
Query: 185 KTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTA 364
K +VA + D+IVF + K VL+EFYAPWCGHC++L PI D++ F+ TA
Sbjct: 375 KVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVALSFQNDPSVIIAKLDATA 434
Query: 365 NEL--EHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGAEPVPTVSEYDEE 538
N++ + + FPTI + V Y G+RT FVE + E +P E +
Sbjct: 435 NDIPSDTFDVKGFPTIYFRSASGNVVVYEGDRTKEDFINFVEKNSE-KKPTSHGEESTKS 493
Query: 539 EDVPTRDE 562
E+ +E
Sbjct: 494 EEPKKTEE 501
Score = 63.3 bits (147), Expect = 1e-10
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Frame = +2
Query: 116 FAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPI 295
F+ L L + S+ + V TL +NF E + + ++VEFYAPWCGHC++L P
Sbjct: 9 FSILLLLSLFVSSIRSEETKEFVLTLDHSNFTETI-SKHDFIVVEFYAPWCGHCQKLAPE 67
Query: 296 YDK----LGEHFEXXXXXXXXXXXXTANELEHT-KITSFPTIKLYTKDNQ-VRDYXGERT 457
Y+K L H E + KI FPT+K+ + V+DY G R
Sbjct: 68 YEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPRE 127
Query: 458 LAGLTKFVE 484
G+ +++
Sbjct: 128 AEGIVTYLK 136
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 99 bits (238), Expect = 1e-21
Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 6/184 (3%)
Frame = +2
Query: 5 EEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPV 184
EE +I D KY T E+ + +E +V+ F G + H S+ +P++ +PV
Sbjct: 320 EESQVPLIIIQTADDKKYLKTNVEV--DQIESWVKDFKDGKIAPHKKSQPIPAE-NNEPV 376
Query: 185 KTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTA 364
K +V+ + D+IV ++ K VL+EFYAPWCGHC++L PI D++ ++ TA
Sbjct: 377 KVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATA 436
Query: 365 NEL--EHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFV----ETDGEGAEPVPTVSE 526
N+ + + FPTI + V Y G+RT FV +T GE + T E
Sbjct: 437 NDFPKDTFDVKGFPTIYFKSASGNVVVYEGDRTKEDFISFVDKNKDTVGEPKKEEETTEE 496
Query: 527 YDEE 538
+E
Sbjct: 497 VKDE 500
Score = 64.1 bits (149), Expect = 7e-11
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDK----LGEHFEXXXXXXXXX 349
V TL TNF + + + + ++VEFYAPWCGHCKQL P Y+K L +
Sbjct: 32 VLTLDHTNFTDTI-NKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDA 90
Query: 350 XXXTANEL-EHTKITSFPTIKLYTKDNQ-VRDYXGERTLAGLTKFVE 484
T E ++ FPTIK++ + V++Y G R G+ +++
Sbjct: 91 SEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLK 137
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 95.1 bits (226), Expect = 3e-20
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Frame = +2
Query: 5 EEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPV 184
EE +I D KY T E+ + +E +V+ F G + H S+ +P++ +PV
Sbjct: 320 EESQVPLIIIQTADDKKYLKTNVEV--DQIESWVKDFKDGKIAPHKKSQPIPAE-NNEPV 376
Query: 185 KTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTA 364
K +V+ + D+IV ++ K VL+EFYAPWCGHC++L PI D++ ++ TA
Sbjct: 377 KVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATA 436
Query: 365 NEL--EHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFV 481
N+ + + FPTI + V Y G+R L F+
Sbjct: 437 NDFPKDTFDVKGFPTIYFKSASGNVVVYEGDRQRESLYLFI 477
Score = 64.1 bits (149), Expect = 7e-11
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDK----LGEHFEXXXXXXXXX 349
V TL TNF + + + + ++VEFYAPWCGHCKQL P Y+K L +
Sbjct: 32 VLTLDHTNFTDTI-NKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDA 90
Query: 350 XXXTANEL-EHTKITSFPTIKLYTKDNQ-VRDYXGERTLAGLTKFVE 484
T E ++ FPTIK++ + V++Y G R G+ +++
Sbjct: 91 SEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLK 137
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 92.3 bits (219), Expect = 2e-19
Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Frame = +2
Query: 170 AAKPVKTLVAT--NFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXX 343
AA P +V T NFDEIV D NK VLVEFYAPWCGHCK L P Y+K+ F+
Sbjct: 137 AAVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVI 196
Query: 344 XXXXXTANEL--EHTKITSFPTIKLYTKDNQV-RDYXGERTLAGLTKFV 481
A++ E ++ FPT+K + KDN+ DY G R L F+
Sbjct: 197 ANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFI 245
Score = 68.5 bits (160), Expect = 3e-12
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Frame = +2
Query: 173 AKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXX 352
A V L +F++ V +K LVEFYAPWCGHCK+L P Y+KLG F+
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKV 80
Query: 353 XXTANELEHTK--ITSFPTIKLYTKDN-QVRDYXGERTLAGLTKFVETDG 493
+ TK ++ +PTI+ + K + + + Y G R L ++V +G
Sbjct: 81 DCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEG 130
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 92.3 bits (219), Expect = 2e-19
Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Frame = +2
Query: 170 AAKPVKTLVAT--NFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXX 343
AA P +V T NFDEIV D NK VLVEFYAPWCGHCK L P Y+K+ F+
Sbjct: 137 AAVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVI 196
Query: 344 XXXXXTANEL--EHTKITSFPTIKLYTKDNQV-RDYXGERTLAGLTKFV 481
A++ E ++ FPT+K + KDN+ DY G R L F+
Sbjct: 197 ANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFI 245
Score = 68.5 bits (160), Expect = 3e-12
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Frame = +2
Query: 173 AKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXX 352
A V L +F++ V +K LVEFYAPWCGHCK+L P Y+KLG F+
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKV 80
Query: 353 XXTANELEHTK--ITSFPTIKLYTKDN-QVRDYXGERTLAGLTKFVETDG 493
+ TK ++ +PTI+ + K + + + Y G R L ++V +G
Sbjct: 81 DCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEG 130
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 91.9 bits (218), Expect = 3e-19
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Frame = +2
Query: 74 ELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEF 253
E+ ++ ++ F + F LK S+ +P + VK +V NFDEIV D +K VL+E
Sbjct: 408 EIQSDKIKIFGEDFLNDKLKPFYKSDPIPEK-NDEDVKIVVGDNFDEIVLDDSKDVLLEV 466
Query: 254 YAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYTKDNQV 433
YAPWCGHC+ L P+Y+KL +H T NE K FPTI + N+
Sbjct: 467 YAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFFPAGNKT 526
Query: 434 RD---YXGERTLAGLTKFV 481
+ +RT+ KF+
Sbjct: 527 SEPITVDTDRTVVAFYKFL 545
Score = 68.5 bits (160), Expect = 3e-12
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Frame = +2
Query: 146 SEDLPS-DWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 322
S+ LP+ + K V + NF +++ + N+ VLVEFYAPWCGHC+ L P Y +
Sbjct: 92 SDPLPTPEIDEKDVVVIKERNFTDVI-ENNQYVLVEFYAPWCGHCQSLAPEYAAAATELK 150
Query: 323 XXXXXXXXXXXXTANEL-EHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETD-GE 496
NEL + ++ FPT+ L+ D + + Y G RT + +V+ G
Sbjct: 151 EDGVVLAKIDATEENELAQEYRVQGFPTL-LFFVDGEHKPYTGGRTKETIVTWVKKKIGP 209
Query: 497 GAEPVPTVSEYDEEEDVPTRDEL*ALGTVSA 589
G + T+ D+ E V T LG +++
Sbjct: 210 GVYNLTTL---DDAEKVLTSGNKVVLGYLNS 237
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 90.2 bits (214), Expect = 9e-19
Identities = 44/122 (36%), Positives = 63/122 (51%)
Frame = +2
Query: 74 ELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEF 253
E+ ++ ++ F + F LK S+ +P + VK +V NFDEIV D +K VL+E
Sbjct: 408 EIQSDKIKIFGEDFLNDKLKPFYKSDPIPEK-NDEDVKIVVGDNFDEIVLDDSKDVLLEV 466
Query: 254 YAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYTKDNQV 433
YAPWCGHC+ L P+Y+KL +H T NE K FPTI + N+
Sbjct: 467 YAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFFPAGNKT 526
Query: 434 RD 439
+
Sbjct: 527 SE 528
Score = 68.5 bits (160), Expect = 3e-12
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Frame = +2
Query: 146 SEDLPS-DWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 322
S+ LP+ + K V + NF +++ + N+ VLVEFYAPWCGHC+ L P Y +
Sbjct: 92 SDPLPTPEIDEKDVVVIKERNFTDVI-ENNQYVLVEFYAPWCGHCQSLAPEYAAAATELK 150
Query: 323 XXXXXXXXXXXXTANEL-EHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETD-GE 496
NEL + ++ FPT+ L+ D + + Y G RT + +V+ G
Sbjct: 151 EDGVVLAKIDATEENELAQEYRVQGFPTL-LFFVDGEHKPYTGGRTKETIVTWVKKKIGP 209
Query: 497 GAEPVPTVSEYDEEEDVPTRDEL*ALGTVSA 589
G + T+ D+ E V T LG +++
Sbjct: 210 GVYNLTTL---DDAEKVLTSGNKVVLGYLNS 237
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/103 (33%), Positives = 50/103 (48%)
Frame = +2
Query: 170 AAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXX 349
++ PV L A+NF V ++N VLVEF+APWCGHCK L P ++K+ +
Sbjct: 28 SSSPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAID 87
Query: 350 XXXTANELEHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKF 478
+ + I FPTIK++ DY G R + F
Sbjct: 88 ADAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARDAKSIANF 130
Score = 70.9 bits (166), Expect = 6e-13
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Frame = +2
Query: 83 ANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKT-------LVATNFDEIVFDTNKKV 241
A ++ F G L L + P+ +K K+ L A+NFD++V ++N+
Sbjct: 124 AKSIANFAYKQIKGLLSDRLEGKSKPTGGGSKEKKSEPSASVELNASNFDDLVIESNELW 183
Query: 242 LVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYTK 421
+VEF+APWCGHCK+L P + + ++ + + + K+ FPTI ++
Sbjct: 184 IVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKLGHVNCDVEQSIMSRFKVQGFPTILVFGP 243
Query: 422 D-NQVRDYXGERTLAGLTKFV-ETDGEGAEPV 511
D + Y G R+ + + F E A PV
Sbjct: 244 DKSSPYPYEGARSASAIESFASELVESSAGPV 275
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/103 (31%), Positives = 51/103 (49%)
Frame = +2
Query: 170 AAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXX 349
++ PV L +NF V ++N VLVEF+APWCGHC+ L P ++K+ +
Sbjct: 26 SSSPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAID 85
Query: 350 XXXTANELEHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKF 478
+ + + FPTIK++ DY G R +++F
Sbjct: 86 ADAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAKSISQF 128
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +2
Query: 191 LVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE 370
L ++NFDE+V ++ + +VEF+APWCGHCK+L P + K + + +
Sbjct: 168 LNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVNCDAEQSI 227
Query: 371 LEHTKITSFPTIKLYTKD-NQVRDYXGERTLAGLTKF 478
K+ FPTI ++ D + Y G R+ + + F
Sbjct: 228 KSRFKVQGFPTILVFGSDKSSPVPYEGARSASAIESF 264
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/122 (31%), Positives = 62/122 (50%)
Frame = +2
Query: 50 AKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDT 229
+KY +D +N +EEF GT+ + S+ +P + A V +V FDE+V +
Sbjct: 376 SKYLLESDPSPSN-IEEFCFGLAHGTVSAYYKSQPIPDNQNASVV-AVVGRTFDEVVLRS 433
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIK 409
++ VL+E + PWC +C+ L +KL +HF+ +ANE + +PTI
Sbjct: 434 SENVLLEVHTPWCINCEALSKQVEKLSQHFKGFENLVFARIDASANEHPKLTVDDYPTIL 493
Query: 410 LY 415
LY
Sbjct: 494 LY 495
Score = 31.5 bits (68), Expect = 0.45
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 128 LKQHLLSEDLPSDWAAKPVKTLVATNFDEI--VFDTNKKVLVEFYAPWCGHCKQLVP 292
L++ + ++ +K + +V N D + D N+ V+V YAPWC +L+P
Sbjct: 56 LQEERPEQQSEAETVSKAQRIVVELNGDNTKRLIDGNEYVMVLGYAPWCARSAELMP 112
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 70.1 bits (164), Expect = 1e-12
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Frame = +2
Query: 50 AKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDT 229
+KY +D S N++EEF GT+ ++ SE +P + A V T+V FD +V ++
Sbjct: 377 SKYLLESDP-SPNSIEEFCSGLAHGTVSRYYRSEPVPDNENASIV-TVVGKTFDGLVLNS 434
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKI---TSFP 400
+ VL+E + PWC +C+ L +KL +HF+ +AN EHTK+ +P
Sbjct: 435 RENVLLEVHTPWCVNCEALSKQIEKLAKHFKGFENLVFARIDASAN--EHTKLQVDDKYP 492
Query: 401 TIKLY 415
I LY
Sbjct: 493 IILLY 497
Score = 33.9 bits (74), Expect = 0.085
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = +2
Query: 203 NFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXX------XXXTA 364
++ + V D N+ V+V YAPWC +L+P + + + A
Sbjct: 85 DYTKRVIDGNEFVMVLGYAPWCARSAELMPRFAEAATALKEIGSSVLMAKIDGDRYSKIA 144
Query: 365 NELEHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGAEPVPTVSEYDE 535
+ELE I FPT+ L+ + Y G + + +V+ GA P+ T++ DE
Sbjct: 145 SELE---IKGFPTLLLFVNGTSL-TYNGGSSAEDIVIWVQKK-TGA-PIITLNTVDE 195
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 155 LPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXX 334
+P + V TL F + + + + V+F PWC HCK+L +++ LG+ E
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 335 XXXXXXXXTANELEHTK--ITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGA 502
+ TK I S+PT L+ +V Y G+R + L FV + E A
Sbjct: 78 IEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKA 135
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 155 LPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXX 334
+P + V TL F + + + + V+F PWC HCK+L +++ LG+ E
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 335 XXXXXXXXTANELEHTK--ITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGA 502
+ TK I S+PT L+ +V Y G+R + L FV + E A
Sbjct: 78 IEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKA 135
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 155 LPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXX 334
+P + V TL F + + + + V+F PWC HCK+L +++ LG+ E
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 335 XXXXXXXXTANELEHTK--ITSFPTIKLYTKDNQVRDYXGERTLAGLTKFVETDGEGA 502
+ TK I S+PT L+ +V Y G+R + L FV + E A
Sbjct: 78 IEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKA 135
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = +2
Query: 170 AAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXX 349
AA V L + + V +++ VLVEF+APWCG C+ + PI D+L + F
Sbjct: 84 AAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKIN 143
Query: 350 XXXTANELEHTKITSFPTIKLYTKDNQVRD 439
+ N I S PT+ ++ K + +D
Sbjct: 144 TDESPNTANRYGIRSVPTVIIF-KGGEKKD 172
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 51.6 bits (118), Expect = 4e-07
Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLG---EHFEXXXXXXXXXX 352
V L +NFD + T + V+FYAPWCGHCK+L P D +
Sbjct: 34 VLELTDSNFDSAI-STFDCIFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNA 92
Query: 353 XXTANELEHTKITSFPTIKLYTKDNQVRDYXGER----TLAGLTKFVETDGEGAEPVPTV 520
+ +I +FPT+ LY + +Y G R + L KFV D E TV
Sbjct: 93 DKYSRLARKIEIDAFPTLMLYNHGVPM-EYYGPRKADLLVRYLKKFVAPDVAVLESDSTV 151
Query: 521 SEYDEE 538
E+ E+
Sbjct: 152 KEFVED 157
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/88 (28%), Positives = 46/88 (52%)
Frame = +2
Query: 176 KPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXX 355
+ K +FD+++ +++K VLV+FYA WCG C+ +VPI +++ E +
Sbjct: 58 RAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTE 117
Query: 356 XTANELEHTKITSFPTIKLYTKDNQVRD 439
+ +I + PT L+ KD ++ D
Sbjct: 118 KYPSLANKYQIEALPTFILF-KDGKLWD 144
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 203 NFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHT 382
+F++++ +++K VLV++YA WCG C+ +VPI +++ E + +
Sbjct: 72 SFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKY 131
Query: 383 KITSFPTIKLYTKDNQVRD-YXGERTLAGLTKFVE 484
KI + PT L+ KD + D + G T L + +E
Sbjct: 132 KIEALPTFILF-KDGEPCDRFEGALTAKQLIQRIE 165
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 200 TNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEH 379
+ +D +V V+V+F+APWCG CK + P+ + L +H+ + N
Sbjct: 88 STWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQ 147
Query: 380 TKITSFPTIKLY 415
+ S PTI ++
Sbjct: 148 YGVRSIPTIMIF 159
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2
Query: 200 TNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEH 379
+ +D +V ++ V V+F+APWCG CK + PI ++L + + +
Sbjct: 82 STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 141
Query: 380 TKITSFPTIKLY 415
+ S PTI ++
Sbjct: 142 YGVRSIPTIMIF 153
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 361
+K + + F V ++ + VLVEF A WCG CK + P + L + +
Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDAN 130
Query: 362 ANELEHTKITSFPTIKLYTKDNQVRDYXGERTLAGLTK 475
+ K+ P L+ KD ++ G R +TK
Sbjct: 131 PKLIAEFKVYGLPHFILF-KDG--KEVPGSRREGAITK 165
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 161 SDWAAKPVKTLVATNFDEIVFDTNKK-VLVEFYAPWCGHCKQLVPIYDKLGEHF 319
SD K V+ L TNFD ++ DT K +VEF+A WC C+ P Y+K+ F
Sbjct: 31 SDQKDKAVE-LNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVARLF 83
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/99 (27%), Positives = 40/99 (40%)
Frame = +2
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIK 409
N + V FYA WC + + P +D L F + I S P+I
Sbjct: 74 NAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQALPSVFSRYGIHSLPSIL 133
Query: 410 LYTKDNQVRDYXGERTLAGLTKFVETDGEGAEPVPTVSE 526
+ + R Y G + L L +F E + G +PV V+E
Sbjct: 134 MVNQTLNAR-YHGRKDLISLIEFYE-EATGLQPVQYVAE 170
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 LVATNFDEIVFDTNKKVLV-EFYAPWCGHCKQLVPIYDKLGEHF 319
L ATNFD + D+ K V EF+A WC C+ P Y+K+ F
Sbjct: 46 LNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLF 89
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 LVATNFDEIVFDTNKKVLV-EFYAPWCGHCKQLVPIYDKLGEHF 319
L ATNFD + D+ K V EF+A WC C+ P Y+K+ F
Sbjct: 46 LNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLF 89
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 224 DTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 319
DTNK +++EF A WCG CK L P ++L +
Sbjct: 57 DTNKLLVIEFTAKWCGPCKTLEPKLEELAAKY 88
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIK 409
+K V+++ Y WCG CK + P Y +L E ++ + I PT K
Sbjct: 97 DKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFK 156
Query: 410 LYTKDNQV 433
+ KDN+V
Sbjct: 157 I-LKDNKV 163
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +2
Query: 233 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKL 412
K V+++ Y WCG CK + P Y L E ++ + I PT K+
Sbjct: 88 KLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKI 147
Query: 413 YTKDNQV 433
KDN+V
Sbjct: 148 -LKDNKV 153
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +2
Query: 203 NFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHT 382
++++ V + VLVEFY WCG C+ + I D++ + E
Sbjct: 75 SWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEY 134
Query: 383 KITSFPTIKLYTKDNQVRD 439
+I + P + L+ K+ + R+
Sbjct: 135 EIKAVPVVLLF-KNGEKRE 152
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +2
Query: 239 VLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYT 418
V+V F A WCG C+ ++PI +K+ ++ E I+ PT ++
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
Query: 419 KDNQVRDYXG 448
Q+ G
Sbjct: 290 GGEQMAKVTG 299
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 224 DTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPT 403
++NK ++++F A WC C+ + PI++ L + F + + + + PT
Sbjct: 26 ESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPT 85
Query: 404 IKLYTKDNQVRD 439
++ K +V D
Sbjct: 86 F-VFIKAGEVVD 96
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/84 (22%), Positives = 38/84 (45%)
Frame = +2
Query: 203 NFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHT 382
+F+EI ++NK ++V+F A WCG C+ + P + + F + +
Sbjct: 39 HFNEIK-ESNKLLVVDFSASWCGPCRMIEPAIHAMADKFN-DVDFVKLDVDELPDVAKEF 96
Query: 383 KITSFPTIKLYTKDNQVRDYXGER 454
+T+ PT L + ++ G +
Sbjct: 97 NVTAMPTFVLVKRGKEIERIIGAK 120
>At4g08930.1 68417.m01470 thioredoxin-related contains weak
similarity to Swiss-Prot:Q39239 thioredoxin H-type 4
(TRX-H-4). [Mouse-ear cress]
Length = 295
Score = 36.3 bits (80), Expect = 0.016
Identities = 26/85 (30%), Positives = 33/85 (38%)
Frame = +2
Query: 251 FYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYTKDNQ 430
FYA WC + + P +D + + A+ L + FPTI L
Sbjct: 81 FYASWCPFSRLVRPSFDLMSLLYSSVPHFAIEESSVKASTLSKYGVHGFPTIILMNSTML 140
Query: 431 VRDYXGERTLAGLTKFVETDGEGAE 505
V Y G RTL L F TD G E
Sbjct: 141 V-VYRGSRTLDSLVAFY-TDVTGIE 163
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 35.5 bits (78), Expect = 0.028
Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 6/116 (5%)
Frame = +2
Query: 212 EIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT--ANELEHTK 385
E K +VEFYA WC C++L P K+ + ++ T EL+
Sbjct: 132 EEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFG 191
Query: 386 ITSFPTIKLYTKD-NQVRDYXGERTLAGLTKFVETDGEGAEPVP---TVSEYDEEE 541
+ P ++ N+ + G L + V G + +P V +Y E
Sbjct: 192 VEGIPHFAFLDREGNEEGNVVGRLPRQYLVENVNALAAGKQSIPYARAVGQYSSSE 247
>At1g34780.1 68414.m04329 protein disulfide isomerase-related
contains weak similarity to Pfam:P08003 protein
disulfide isomerase A4 precursor (Protein ERp-72, ERp72)
[Mus musculus]
Length = 310
Score = 35.1 bits (77), Expect = 0.037
Identities = 24/95 (25%), Positives = 35/95 (36%)
Frame = +2
Query: 239 VLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYT 418
V + FYA WC + P +D + + + L + FPT+ L
Sbjct: 84 VALLFYASWCPFSRSFRPSFDVISSLYSSIPHFAIKESSIKPSTLSKYGVHGFPTLLLLN 143
Query: 419 KDNQVRDYXGERTLAGLTKFVETDGEGAEPVPTVS 523
+ R Y G R L L F +D G E + S
Sbjct: 144 STMRAR-YRGTRMLDSLVAFY-SDVTGIETLDKTS 176
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 34.7 bits (76), Expect = 0.048
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +2
Query: 242 LVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTK----ITSFPTIK 409
+V YAPWC C+ + YD+L + ++ E K + SFPTI
Sbjct: 377 IVVLYAPWCPFCQAMEASYDELADKL-AGSGIKVAKFRADGDQKEFAKQELQLGSFPTIL 435
Query: 410 LYTKDNQ--VRDYXGERTLAGLTKFV 481
++ K++ ++ +R + LT F+
Sbjct: 436 VFPKNSSRPIKYPSEKRDVESLTSFL 461
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 33.9 bits (74), Expect = 0.085
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 17/140 (12%)
Frame = +2
Query: 113 FFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVP 292
F AG + + D + + L NFD ++V FYAPWC C L P
Sbjct: 120 FHAGEVLSLINHGDETGEEIVEDSVPLTGRNFDTFTHQF-PILVVNFYAPWCYWCNLLKP 178
Query: 293 IYDK----LGEHFEXXXXXXXXXXXXTANE----LEHTKITSFPTIKLYTKDNQVRD--- 439
++K + E ++ + I +P+I+++ K + ++D
Sbjct: 179 SWEKAAKQIKERYDPEMDGRVILAKVDCTQEGDLCRRNHIQGYPSIRIFRKGSDLKDDNA 238
Query: 440 ------YXGERTLAGLTKFV 481
Y G+R L K V
Sbjct: 239 HHDHESYYGDRDTESLVKMV 258
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 33.9 bits (74), Expect = 0.085
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Frame = +2
Query: 182 VKTLVATNFDEIVFDTNK-KVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXX 358
VK L A E+V K ++V+FYA WCG C + + L +E
Sbjct: 77 VKKLSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDD 136
Query: 359 TANELEHTKITSFPTIKLYTKD 424
++ PT+ + D
Sbjct: 137 EYEFARDMQVRGLPTLFFISPD 158
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 33.9 bits (74), Expect = 0.085
Identities = 17/93 (18%), Positives = 38/93 (40%)
Frame = +2
Query: 212 EIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKIT 391
++ ++ + +LV + +P CG C+ L PI +K+ + + E I
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 392 SFPTIKLYTKDNQVRDYXGERTLAGLTKFVETD 490
P ++ + +R G + +F+E +
Sbjct: 496 GTPCVQFFKNKEMLRTISGVKMKKEYREFIEAN 528
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/73 (20%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 224 DTNKKVLVEFYAPWCGHCKQLVPIY-DKLGEHFEXXXXXXXXXXXXTANELEHTKITSFP 400
++ K ++++F A WC C+ + P++ D +H + T E K+ + P
Sbjct: 25 ESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTV--AEEFKVQAMP 82
Query: 401 TIKLYTKDNQVRD 439
T ++ K+ ++++
Sbjct: 83 TF-IFMKEGEIKE 94
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 5/95 (5%)
Frame = +2
Query: 23 RLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLV-- 196
R L + TT L N V + ++ + P W K ++
Sbjct: 39 RFYGLSSSSSSSSLTTSSLIGNLVFSSRNQSLSVKVQALAAETEQPKWWERKAGPNMIDI 98
Query: 197 --ATNFDEIVFDTNKK-VLVEFYAPWCGHCKQLVP 292
A F + D + V+V+FY WCG C+ + P
Sbjct: 99 TSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFP 133
>At3g62510.1 68416.m07023 protein disulfide isomerase-related
contains weak similarity tot Swiss-Prot:P80284 protein
disulfide isomerase precursor (PDI) (Endosperm protein
E-1) [Hordeum vulgare]
Length = 93
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 74 ELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKK 238
E+ + +E +V+ F G H S+ +P++ +PVK +VA + D+IV + +K
Sbjct: 7 EVEVDQIESWVKDFQDGKAAVHKNSQPIPAE-NNEPVKLVVAESLDDIVQVSERK 60
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/83 (24%), Positives = 32/83 (38%)
Frame = +2
Query: 200 TNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEH 379
T D+I + ++ + A WCG C Q++P + KL F H
Sbjct: 34 TILDDIK-SSKSPAVINYGASWCGVCSQILPAFRKLSNSF-SKLKFVYADIDECPETTRH 91
Query: 380 TKITSFPTIKLYTKDNQVRDYXG 448
+ T PT + Y +V + G
Sbjct: 92 IRYT--PTFQFYRDGEKVDEMFG 112
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 32.3 bits (70), Expect = 0.26
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +2
Query: 224 DTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPT 403
++ K ++++F A WC C+ + P++ ++ + F A E K+ + PT
Sbjct: 25 ESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEF-KVEAMPT 83
Query: 404 IKLYTKDNQVRD 439
++ K+ + D
Sbjct: 84 F-VFMKEGNIID 94
>At2g22310.1 68415.m02647 ubiquitin-specific protease 4 (UBP4)
identical to GI:2347100
Length = 365
Score = 31.9 bits (69), Expect = 0.34
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -1
Query: 292 RNQLFAMAAPGGVEFNENLLVSVKDDLIEVGGD*SLDGFSSPVR--GQVLAQQVLFQSSS 119
R QL A + ENLL + D ++ G +P R ++ Q LF+S
Sbjct: 48 REQLLEHYANNKADAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYM 107
Query: 118 EERLHEFLNSVSAKLI 71
+ HEFLN + +L+
Sbjct: 108 HQDAHEFLNYLLNELV 123
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 209 DEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGE 313
D ++ ++ V+++FY+P CG CK L P +L E
Sbjct: 98 DSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAE 132
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 31.5 bits (68), Expect = 0.45
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = +2
Query: 242 LVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE---LEHTKITSFPTIKL 412
+V YAPWC C+ + +D+L + + + ++ SFPTI +
Sbjct: 370 IVVLYAPWCPFCQAMEASFDELADKLGGSGVKVAKFRADGDQKDFAKKELQLGSFPTILV 429
Query: 413 YTKDNQ--VRDYXGERTLAGLTKFV 481
+ K++ ++ +R + LT F+
Sbjct: 430 FPKNSSRPIKYPSEKRDVDSLTSFL 454
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKLGE 313
+K V+V+F++P CG CK L P K+ E
Sbjct: 113 DKLVVVDFFSPSCGGCKALHPKICKIAE 140
>At5g64813.1 68418.m08152 GTP-binding protein-related contains weak
similarity to Ras-related protein Rab-27A (Rab-27)
(GTP-binding protein Ram) (Swiss-Prot:P51159) [Homo
sapiens]
Length = 342
Score = 31.1 bits (67), Expect = 0.60
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 95 EEFVQSFFAGTLKQHLLSEDLP--SDWAAKPVKTLVATNFDEIVFDTNK 235
+E + FF +++ S++LP S W+ PV T + DEI D ++
Sbjct: 221 KEALNKFFRMLIRRRYFSDELPAASPWSISPVPTSSSQRLDEITSDDDQ 269
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 31.1 bits (67), Expect = 0.60
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 233 KKVLVEFYAPWCGHCKQLVPIYDKLGE 313
K V+ F A WCG CK + P + +L E
Sbjct: 46 KIVVANFSATWCGPCKIVAPFFIELSE 72
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 31.1 bits (67), Expect = 0.60
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +2
Query: 242 LVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE---LEHTKITSFPTIKL 412
LV YAPWC C+ + Y +L E + + ++ SFPTI L
Sbjct: 366 LVVLYAPWCPFCQAMEASYIELAEKLAGKGVKVAKFRADGEQKEFAKQELQLGSFPTILL 425
Query: 413 YTK 421
+ K
Sbjct: 426 FPK 428
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 31.1 bits (67), Expect = 0.60
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 227 TNKKVLVEFYAPWCGHCKQLVP 292
+NK ++++F A WCG CK + P
Sbjct: 42 SNKLLVIDFTAVWCGPCKAMEP 63
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 30.7 bits (66), Expect = 0.79
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 239 VLVEFYAPWCGHCKQLVP 292
V+VEFY WC C+ L P
Sbjct: 126 VIVEFYGTWCASCRALFP 143
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 30.7 bits (66), Expect = 0.79
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 239 VLVEFYAPWCGHCKQLVP 292
V+VEFY WC C+ L P
Sbjct: 126 VIVEFYGTWCASCRALFP 143
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 30.7 bits (66), Expect = 0.79
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = +2
Query: 146 SEDLPSDWAAKPVKTLVATNFDEIVFDT--NKKVLVEFYAPWCGHCK----QLVPIYDKL 307
++DL S ++ LV + +++ D+ KK+ + F A WCG C+ QLV +Y++L
Sbjct: 13 AQDLHSLLSSPARDFLVRNDGEQVKVDSLLGKKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 251 FYAPWCGHCKQLVPIYDKLGEHF-EXXXXXXXXXXXXTANELEHTKITSFPTIKLY 415
F A WCG C+ + P+ +L + + + +N + IT+ PT+ +
Sbjct: 113 FTAAWCGPCRFISPVIVELSKQYPDVTTYKVDIDEGGISNTISKLNITAVPTLHFF 168
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 209 DEIVFDTNKKVLVEFYAPWCGHCKQLVP 292
D + +K V+V+F++P CG CK L P
Sbjct: 110 DSLTNAGDKLVVVDFFSPGCGGCKALHP 137
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 239 VLVEFYAPWCGHCKQLVPIYDKLGE 313
V+V+F A WCG C+ + P + L +
Sbjct: 31 VVVDFTASWCGPCRFIAPFFADLAK 55
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 230 NKKVLVEFYAPWCGHCKQLVPIYDKL 307
++ +++ F A WCG C+ + P+Y L
Sbjct: 292 SRLLILYFTATWCGPCRYMSPLYSNL 317
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 224 DTNKKVLVEFYAPWCGHCKQLVPIYDKL 307
+TN V+V+FY CG CK + + KL
Sbjct: 118 ETNSLVVVDFYRTACGSCKYIEQGFSKL 145
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 224 DTNKKVLVEFYAPWCGHCKQLVPIYDKL 307
+TN V+V+FY CG CK + + KL
Sbjct: 105 ETNSLVVVDFYRTACGSCKYIEQGFSKL 132
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 224 DTNKKVLVEFYAPWCGHCKQLVPIYDKL 307
+TN V+V+FY CG CK + + KL
Sbjct: 105 ETNSLVVVDFYRTACGSCKYIEQGFSKL 132
>At1g49890.1 68414.m05593 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 659
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 414 TLKTTRYATTTVSERSQDSLSS*RQTAKE-PSPCPL 518
T TT TTT S S S S+ +T+K PSP PL
Sbjct: 52 TTTTTTTTTTTTSSSSSSSSSAILRTSKRYPSPSPL 87
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 146 SEDLPSDWAAKPVKTLVATNFD-EIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 322
S DL S AA+ ++ L++ + + + + K + + F A WC CK P KL E+ +
Sbjct: 14 SGDLYSILAAEGIEFLLSHSGEVPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQ 73
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 146 SEDLPSDWAAKPVKTLVATNFD-EIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 322
S DL S AA+ ++ L++ + + + + K + + F A WC CK P KL E+ +
Sbjct: 14 SGDLYSILAAEGIEFLLSHSGEVPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQ 73
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 233 KKVLVEFYAPWCGHCKQLVPIYDKLGEHF 319
K ++V F A WC K ++PIY +L +
Sbjct: 63 KILVVNFKASWCLPSKTILPIYQELASTY 91
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 27.5 bits (58), Expect = 7.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 257 APWCGHCKQLVPIYDKLGEHF 319
APWC CK++ P++ L +
Sbjct: 17 APWCVPCKKIEPVFRDLASRY 37
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 27.5 bits (58), Expect = 7.4
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 365 NELEHTKITSFPTIKLYTKDNQVRDYXGERTLA-GLTKFVETDGEGAEPVPTVSEYDE-- 535
+ELE TK + +KLY K V+DY ++ ++ G K+VE D E S+Y +
Sbjct: 544 DELEKTKADN---VKLYGKIRYVQDYNHDKVVSRGSKKYVE-DLESGFSSDVESKYKKIY 599
Query: 536 EEDV 547
E+D+
Sbjct: 600 EDDI 603
>At2g47220.1 68415.m05897 3' exoribonuclease family domain 1
protein-related similar to polynucleotide phosphorylase
[Pisum sativum] GI:2286200, polyribonucleotide
phophorylase [Spinacia oleracea] GI:1924972; contains
Pfam profiles PF05266: Protein of unknown function
(DUF724), weak hit to PF01138: 3' exoribonuclease
family, domain 1
Length = 469
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 155 LPSDWAAKPVKTLVATNFDE 214
LPSDW PVK A + DE
Sbjct: 256 LPSDWTPDPVKNFAADDDDE 275
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 27.5 bits (58), Expect = 7.4
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 17/99 (17%)
Frame = +2
Query: 239 VLVEFYAPWCGHCKQLVPIYDKLG----EHFEXXXXXXXXXXXXTANE----LEHTKITS 394
++V FYAPWC +L P + K E + E + I
Sbjct: 162 LVVNFYAPWCYWSNRLKPSWVKASQITRERYNPGTDDRVLLGSVDCTEEPTLCKSNHIQG 221
Query: 395 FPTIKLYTKDNQVRD---------YXGERTLAGLTKFVE 484
+P+I+++ + + +R+ Y G+R L K VE
Sbjct: 222 YPSIRIFRRGSGLREDHGNHEHESYYGDRDTDSLVKMVE 260
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 251 FYAPWCGHCKQLVPIYDKLGEHF-EXXXXXXXXXXXXTANELEHTKITSFPTIKLY 415
F A WCG C+ + P+ +L + + +N + +++ PT++ +
Sbjct: 78 FTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEGGLSNAIGKLNVSAVPTLQFF 133
>At3g53700.1 68416.m05931 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 754
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 201 PTSMRSSLTLTRR-FSLNSTPPGAAIA 278
P S+ ++TLT FSLN TPP + I+
Sbjct: 11 PFSISQAVTLTHHSFSLNLTPPSSTIS 37
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,552,303
Number of Sequences: 28952
Number of extensions: 210035
Number of successful extensions: 701
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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