Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J24
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   2.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.8  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   6.6  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   8.7  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 261 SLVTRWKLATSGWNI 305
           SLVTR KL   GW++
Sbjct: 130 SLVTRQKLLELGWDV 144


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 261 SLVTRWKLATSGWNI 305
           SLVTR KL   GW++
Sbjct: 252 SLVTRQKLLELGWDV 266


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 135 FAWKFGAEILSEKVAEVEADAIVPDSVTSISALCTIA 245
           F W F     S  +   +    + +++ SISA C IA
Sbjct: 219 FLWLFWPSFNSAALEGDDQQRAIINTLLSISASCVIA 255


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 264 LVTRWKLATSGWNI 305
           LVTR KL   GW++
Sbjct: 132 LVTRQKLLELGWDV 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,470
Number of Sequences: 438
Number of extensions: 2801
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)