Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J23
         (240 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   4.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        19   6.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    19   6.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   8.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +3

Query: 42   LYCSPFWHSLCIAMRNVSPD 101
            L   P WH++      ++PD
Sbjct: 1461 LRLGPCWHAVMTTYPRINPD 1480


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 175 ERKRTVYRQNW 207
           E  R ++RQNW
Sbjct: 145 ESWRPIFRQNW 155


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 110 VQELRRQGFDESLMSNWV 163
           + +    GF ESL ++W+
Sbjct: 783 ILDFHESGFMESLDNHWI 800


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 11/44 (25%), Positives = 15/44 (34%)
 Frame = -1

Query: 228 DPFLFTLPILSVNRPLSFSTRQTQXXXXXXXXXXXXXXCTNPHL 97
           +PF F +  L   RP  +S R+                 T P L
Sbjct: 316 EPFPFLMLPLGAGRPAFWSLRKAFARKKTDYSSFGKILATEPTL 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,504
Number of Sequences: 438
Number of extensions: 836
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)