Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J20
(591 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 50 3e-07
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 44 2e-05
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 33 0.041
SPBP8B7.31 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|... 28 0.89
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 4.7
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 26 4.7
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 6.2
SPAC824.08 |gda1|gdp1|guanosine-diphosphatase Gda1|Schizosacchar... 25 8.3
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 8.3
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 49.6 bits (113), Expect = 3e-07
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Frame = +3
Query: 60 CLTLNIYVPTTSNSNQPTPVIVWFYGGGYIMGSAGDY---GGKYLVKHN----IIVVTVN 218
CL LNI+VP + PV+ + +GG +G+ Y + L I+V+
Sbjct: 82 CLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPAKFILVSPG 141
Query: 219 YRLGPYGFFC*----DDASVPGNQGLKDQITALQWIKENIGAFGGNASKVTIAGESYGGG 386
+RL +GF ++ N G DQ L+W ++I +FGGN + + G S G
Sbjct: 142 HRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAVGGISAGSY 201
Query: 387 SVDLHLYSLYEKLFDKA--IVQSGSMFTEGMFVK 482
S L +YE +A I++ + + G+ V+
Sbjct: 202 SALFQL--IYETYHPEANQIIKRALLLSNGLSVQ 233
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 44.0 bits (99), Expect = 2e-05
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 114 PVIVWFYGGGYIMG---SAGDYGGKYLVKHNIIVVTVNYRLGPYGFFC*DDASVPGNQGL 284
P +WF+GGG+++G + + + +VV V+YRL P +D P +
Sbjct: 101 PCFLWFHGGGWVLGNINTENSFATHMCEQAKCVVVNVDYRLAP------ED---PFPACI 151
Query: 285 KDQITALQWIKENIGAFGGNASKVTIAGESYGG 383
D AL + EN G N +K+ + G S GG
Sbjct: 152 DDGWEALLYCYENADTLGINPNKIAVGGSSAGG 184
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 32.7 bits (71), Expect = 0.041
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +3
Query: 117 VIVWFYGGGYIMGSAGDYGGKYLV---KHNIIVVTVNYRLGPYGFFC*DDASVPGNQGLK 287
++V+++ G+ M D + + K + V+V+YRL P F V N
Sbjct: 92 LMVFYHSSGWCMRGVRDDDSLFKILTPKFGCVCVSVDYRLAPESKF-----PVAHN---- 142
Query: 288 DQITALQWIKENIGAFGGNASKVTIAGESYGGGS 389
D I + +W+ NI G N + G + GG+
Sbjct: 143 DAIDSFKWVASNIEKLGANPKRGFFLGGASAGGN 176
>SPBP8B7.31 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 177
Score = 28.3 bits (60), Expect = 0.89
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 529 LWPSSFDNFMAAPWSPLTNIPSVNID 452
LWP D + AP+ P N P V ID
Sbjct: 19 LWPLWIDTHVTAPFKPSKNDPGVLID 44
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 4.7
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -3
Query: 490 WSPLTNIPSVNIDPLCTIALSNNFSYKEY-RCKSTLPPP*LSPAI---VTFDALPPNAPM 323
+ PL +I SV + LC AL N SY+ + + PP P + +T + LPP
Sbjct: 475 YRPLIDITSVGLPLLCDEALWNADSYEAWTSLLNENDPPHFFPVLKMFLTNEHLPPKLSP 534
Query: 322 FSLI 311
++++
Sbjct: 535 WNMM 538
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 25.8 bits (54), Expect = 4.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 477 RTYLQ*TSTHFALSLCQITFHTKNI 403
R YL+ T++ + L LC I F+ ++I
Sbjct: 871 RAYLRLTASKYFLKLCSIPFYAEHI 895
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -3
Query: 589 ITCNGSALANKFRASFVRSVLWPSSFDNFMAAPWSPLTNIPSV 461
+ CN S+ F + V+ P SF A WS L S+
Sbjct: 713 LACNSSSAIYSFLSDLVQYSFQPDSFIKEAADRWSKLVTEKSI 755
>SPAC824.08 |gda1|gdp1|guanosine-diphosphatase
Gda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 556
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 309 WIKEN--IGAFGGNASKVTIAGESYGGGSVDL 398
WI N +G GG A+ T+A GG S L
Sbjct: 261 WITINYLLGTLGGKATHSTVAVMDLGGASTQL 292
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 457 IDPLCTIALSNNFSYKEYRCKSTLPPP*LSPAIVTFD 347
I L T+A NN ++ +C + PP L P ++ +
Sbjct: 573 IPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSME 609
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,539,277
Number of Sequences: 5004
Number of extensions: 54986
Number of successful extensions: 126
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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