Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J18
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 51 6e-07
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 51 6e-07
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 27 8.9
U53141-1|AAA96103.1| 322|Caenorhabditis elegans Serpentine rece... 27 8.9
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Frame = -2
Query: 548 EYAPVCGSNGKTYANKCSLECTQKIIPS-------LKMEHDGECQGAKLASLHPCICTRE 390
EY+PVC SNG+ N+C L+ + ++ + L ++DGEC + C +
Sbjct: 875 EYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-----CRIENCDIS-V 928
Query: 389 KGPVCGSDGVTYSNLCLL---KCASL--SKPSLSIEHTGPCDN 276
PVC ++GVT++N+CL+ C + +K ++ + + G C N
Sbjct: 929 FSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCN 971
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -2
Query: 407 CICTREKGPVCGSDGVTYSNLCLLKCASLSKPSLSIEHTGPC 282
C C PVCG+D VTY+NLC L+C + L + G C
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTC 60
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -2
Query: 545 YAPVCGSNGKTYANKCSL--ECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKGPVCG 372
Y P+CG+NG T+ N CSL E + ++++ + G C C + PVC
Sbjct: 776 YDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN--------CPSDFSPVCD 827
Query: 371 SDGVTYSNLC 342
S G T+ N+C
Sbjct: 828 SKGSTHQNIC 837
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKGPVCGSDGV 360
PVCG++ TY N C L C Q+ L ++G C K C + P+C + G
Sbjct: 27 PVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKK-------ECEKVGTPICDNFGE 79
Query: 359 TYSNLC---LLKCASLSKPSLSIE--HTGPCDN 276
T+ N C +C LS+ H G C +
Sbjct: 80 THINDCHFAQFQCIMKKSMGLSLTKLHMGRCSS 112
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLECTQKIIPS----LKMEHDGECQGAKLASLHPCICTREKGPVCG 372
PVC S G + N C ++ I S + + + C +K A PC T +K P+C
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCI-SKEACQMPC--TDDKHPICA 599
Query: 371 SDGVTYSNLCLLKCASLSKPSLSIEHTGPC 282
SD TY NLC + L + G C
Sbjct: 600 SDFSTYENLCQFRKQKCLDSELEVLFKGKC 629
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = -2
Query: 539 PVCGSNGKTYANKC---SLECTQKIIPSLKME--HDGECQGAKLASLHPCICTREKGPVC 375
P+C + G+T+ N C +C K L + H G C H C T E PVC
Sbjct: 72 PICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKDCN--HNCTNT-EFDPVC 128
Query: 374 GSDGVTYSNLCLLK 333
++G Y NLC+ +
Sbjct: 129 DTNGSVYRNLCVFQ 142
Score = 37.9 bits (84), Expect = 0.005
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -2
Query: 536 VCGSNGKTYANKCSLE---CTQKIIP--SLKMEHDGECQGAKLASLHPCICTREKGPVCG 372
VC S G+T+ N C + C + I +L + H GEC LAS C + PVC
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC--CALAS-----CPKTGQPVCD 1082
Query: 371 SDGVTYSNLC 342
S G T+ +LC
Sbjct: 1083 SRGRTHDSLC 1092
Score = 36.3 bits (80), Expect = 0.015
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLECTQ----KIIPSLKMEHDGECQGAKLASLHPCICTREKGPVCG 372
PVC T+ N C Q ++ +L + + GEC L P G VC
Sbjct: 980 PVCDGT-ITHPNICRFRIAQCEAERVNKTLSIAYSGEC------CLLPKGECESSGAVCD 1032
Query: 371 SDGVTYSNLCLL---KC--ASLSKPSLSIEHTGPC 282
S+G T+ N C+ +C ++S+ +L+I HTG C
Sbjct: 1033 SEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC 1067
Score = 35.5 bits (78), Expect = 0.025
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = -2
Query: 401 CTREKGPVCGSDGVTYSNLCLLK---CASLSKPSLSIEHTGP-CDNN 273
C P+CG++GVT++N C L+ C S + ++ + +TG CD N
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICES-ANSTIEVAYTGMCCDTN 817
Score = 35.1 bits (77), Expect = 0.034
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLE---C-TQKIIPS-LKMEHDGECQGAKLASLHPCICTREKGPVC 375
PVC + +T+ N C + C KI S + + H G C+ K + C +K P+C
Sbjct: 263 PVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCI-TCPKDEKKIPIC 321
Query: 374 GSDGVTYSNLC 342
+ +T+ LC
Sbjct: 322 DNRNMTHPTLC 332
Score = 33.9 bits (74), Expect = 0.077
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSL----------ECTQKIIPSLKMEHDGECQGAKLASLHPCICTRE 390
P+C + T+ CS E ++++ +K H+ Q + P C+R+
Sbjct: 319 PICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCSRD 378
Query: 389 KGPVCGSDGVTYSNLCLLKCASLSKPSLSI-----EHTGPCDNNR 270
PVC T+ NLC + + + L I + PC NR
Sbjct: 379 VKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYLRPCVKNR 423
Score = 31.9 bits (69), Expect = 0.31
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = -2
Query: 548 EYAPVCGSNGKTYANKCSLECTQKIIPS-----LKMEHDGECQGAKLASLHPCICTREKG 384
+++PVC S G T+ N C + I L ++ C K + C +E
Sbjct: 821 DFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECN---NACPKEYS 877
Query: 383 PVCGSDGVTYSNLCLL 336
PVC S+G N C L
Sbjct: 878 PVCASNGQNIVNECEL 893
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKGPVCGSDGV 360
PVC S G+T+ + C ++ I + ++ + P CT E +C
Sbjct: 1079 PVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQ-GKCCPAGCTDELSVICDQHEN 1137
Query: 359 TYSNLCL--LKCASLSKPSLSIEHTGPC 282
Y N C LK + + + PC
Sbjct: 1138 IYRNSCYFNLKACETWRRTQDVLLATPC 1165
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 548 EYAPVCGSNGKTYANKC 498
E+ PVC +NG Y N C
Sbjct: 123 EFDPVCDTNGSVYRNLC 139
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 50.8 bits (116), Expect = 6e-07
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHPC------------ 405
PVC +NG+T+ N+C ++ C K + +K++H G C A+ C
Sbjct: 403 PVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVCVVVDGK 460
Query: 404 ------ICTREKGPVCGSDGVTYSNLCLLK-CASLSKPSLSIEHTGPCD 279
CT E VCGSDG TYSN C L+ A +++ ++ +++ C+
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 509
Score = 41.5 bits (93), Expect = 4e-04
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 19/109 (17%)
Frame = -2
Query: 548 EYAPVCGSNGKTYANKCSLE---CTQKIIPSLK-MEHDGECQGAKLASLHPC-------- 405
E +PVC S+G Y + C L C K ++K C G K + C
Sbjct: 256 ESSPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRP 315
Query: 404 ------ICTREKGPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPCD 279
CT VCG+DG TY N C LK A+ + + + G CD
Sbjct: 316 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 364
Score = 40.3 bits (90), Expect = 9e-04
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Frame = -2
Query: 548 EYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA---------------S 417
E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 471 EFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVGENE 530
Query: 416 LHPCIC-------TREKG-PVCGSDGVTYSNLC-LLKCASLSKPSLSIEHTGPCD 279
C C E+G VCG+DGVTYS+ C + K A + G CD
Sbjct: 531 KAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCD 585
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Frame = -2
Query: 542 APVCGSNGKTYANKCSLE-----------------CTQKIIPSLKMEHD--GEC--QGAK 426
A VCG++GKTY N+C L+ C + P KME G C + +
Sbjct: 328 AHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDR 387
Query: 425 LASLH-PCICTREKGPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPC 282
A P C PVC ++G T+ N C +K S +K + ++H G C
Sbjct: 388 TAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 437
Score = 35.5 bits (78), Expect = 0.025
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Frame = -2
Query: 536 VCGSNGKTYANKCSLE---CTQK--IIPSLKMEHDG----ECQGAKLASLHPCICTRE-- 390
VCG++G TY+++C ++ C Q ++ + + + D +C+ + C+C+
Sbjct: 551 VCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCP 610
Query: 389 -----KGPVCGSDGVTYSNLCLLKCASLSK 315
+CG +GV Y +LC L+ AS K
Sbjct: 611 ANPPLSARICGENGVLYPSLCHLQLASCQK 640
Score = 34.7 bits (76), Expect = 0.044
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2
Query: 380 VCGSDGVTYSNLCLLK 333
VCGSDG TYSNLC LK
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 33.1 bits (72), Expect = 0.14
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 24/97 (24%)
Frame = -2
Query: 542 APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKL----------------AS 417
A +CG NG Y + C L+ QK P +M C +K A+
Sbjct: 617 ARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDFKVRRPCACYFGAT 675
Query: 416 LHPCICT------REKGPVCGSDGVTYSNLCLLKCAS 324
H CT P+CGSDG+ Y+N C L S
Sbjct: 676 CHNWACTCPTCNLSSNYPICGSDGIVYNNQCHLNTIS 712
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -2
Query: 380 VCGSDGVTYSNLCLLKCAS--LSKPS--LSIEHTGPC 282
VCGSD V+YS+ C L S L+K L + GPC
Sbjct: 176 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPC 212
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 536 VCGSNGKTYANKCSLE 489
VCGS+G TY+N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 50.8 bits (116), Expect = 6e-07
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHPC------------ 405
PVC +NG+T+ N+C ++ C K + +K++H G C A+ C
Sbjct: 411 PVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVCVVVDGK 468
Query: 404 ------ICTREKGPVCGSDGVTYSNLCLLK-CASLSKPSLSIEHTGPCD 279
CT E VCGSDG TYSN C L+ A +++ ++ +++ C+
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 517
Score = 41.5 bits (93), Expect = 4e-04
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 19/109 (17%)
Frame = -2
Query: 548 EYAPVCGSNGKTYANKCSLE---CTQKIIPSLK-MEHDGECQGAKLASLHPC-------- 405
E +PVC S+G Y + C L C K ++K C G K + C
Sbjct: 264 ESSPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRP 323
Query: 404 ------ICTREKGPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPCD 279
CT VCG+DG TY N C LK A+ + + + G CD
Sbjct: 324 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 372
Score = 40.3 bits (90), Expect = 9e-04
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Frame = -2
Query: 548 EYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA---------------S 417
E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 479 EFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVGENE 538
Query: 416 LHPCIC-------TREKG-PVCGSDGVTYSNLC-LLKCASLSKPSLSIEHTGPCD 279
C C E+G VCG+DGVTYS+ C + K A + G CD
Sbjct: 539 KAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCD 593
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Frame = -2
Query: 542 APVCGSNGKTYANKCSLE-----------------CTQKIIPSLKMEHD--GEC--QGAK 426
A VCG++GKTY N+C L+ C + P KME G C + +
Sbjct: 336 AHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDR 395
Query: 425 LASLH-PCICTREKGPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPC 282
A P C PVC ++G T+ N C +K S +K + ++H G C
Sbjct: 396 TAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 445
Score = 35.5 bits (78), Expect = 0.025
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Frame = -2
Query: 536 VCGSNGKTYANKCSLE---CTQK--IIPSLKMEHDG----ECQGAKLASLHPCICTRE-- 390
VCG++G TY+++C ++ C Q ++ + + + D +C+ + C+C+
Sbjct: 559 VCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCP 618
Query: 389 -----KGPVCGSDGVTYSNLCLLKCASLSK 315
+CG +GV Y +LC L+ AS K
Sbjct: 619 ANPPLSARICGENGVLYPSLCHLQLASCQK 648
Score = 34.7 bits (76), Expect = 0.044
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2
Query: 380 VCGSDGVTYSNLCLLK 333
VCGSDG TYSNLC LK
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = -2
Query: 542 APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKLASLHPCICTR--EKGPVC 375
A +CG NG Y + C L+ QK P +M C +K + C C R G C
Sbjct: 625 ARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDSCQCNRVGSFGHTC 683
Query: 374 GSDG 363
G
Sbjct: 684 DETG 687
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -2
Query: 380 VCGSDGVTYSNLCLLKCAS--LSKPS--LSIEHTGPC 282
VCGSD V+YS+ C L S L+K L + GPC
Sbjct: 184 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPC 220
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 536 VCGSNGKTYANKCSLE 489
VCGS+G TY+N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 41.1 bits (92), Expect = 5e-04
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Frame = -2
Query: 548 EYAPVCGSNGKTYANKCSL---ECTQK--IIPSLKMEHDGECQGAKLASLHPCICTREKG 384
E+ PVC G+T+AN C+ +C K + SL++++ G C C +
Sbjct: 128 EWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC------CEDMCSAGQTSL 181
Query: 383 PVCGSDGVTYSNLC---LLKC----ASLSKPSLSIEHTGPC 282
VC S+G T++++C + KC + K L I GPC
Sbjct: 182 TVCDSEGNTHTDICSFYIAKCRQMRRGIGKKRLQIAGVGPC 222
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -2
Query: 548 EYAPVCGSNGK---TYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKGPV 378
E PVC G TY+NKC +C Q+ L + ++G C A+ C + PV
Sbjct: 30 EIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR-------YCNMFEQPV 82
Query: 377 CGSDGVTYSNLC 342
C S+G Y +C
Sbjct: 83 C-SEGQMYQTVC 93
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -2
Query: 407 CICTREKGPVCGSDG---VTYSNLCLLKCASLSKPSLSIEHTGPCDNNR 270
C C E PVC +G TYSN C+ +CA +K L + + G C + R
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR 73
Score = 37.1 bits (82), Expect = 0.008
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDG-ECQGAKLASLHPCICTREKGPVCGSDG 363
PVC S G+ Y C E Q I L H + K + PC E PVC G
Sbjct: 81 PVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAPC--PTEWNPVCDKKG 137
Query: 362 VTYSNLCLL---KCASLSK--PSLSIEHTGPC 282
T++N C KC ++ SL ++++G C
Sbjct: 138 QTHANFCTFLNSKCYHKNQLNESLEVDYSGVC 169
>U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical
protein C16B8.2 protein.
Length = 615
Score = 29.5 bits (63), Expect = 1.7
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Frame = -2
Query: 539 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGA-KLASLHPCICTREKGPVCGSDG 363
P+CG N NK + Q + + E+D EC + + L C C G
Sbjct: 140 PICGKNCFVALNKNGCQDCQCLWLAQDCENDEECSASNQYCDLGKCNCRDGYQQNMSKSG 199
Query: 362 VTYSNLCLLKCASLSKPSLS--IEHTGPCDNN 273
N + SKP LS +E G CD N
Sbjct: 200 AIPENE-FKRNKRESKPRLSERLEWPGVCDKN 230
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 470 PSLKMEHDGECQGAKLASLHPCICTREKGPV-CGSD-GVTYSNLCLLKCASLSKPSLSIE 297
P ++ H G C KL + C C + K V CGSD V +C + + I
Sbjct: 333 PCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGSDQEVMCETVCGKQLSCGQHNCERIC 392
Query: 296 HTGPC 282
H+G C
Sbjct: 393 HSGDC 397
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = -2
Query: 539 PVCGSN-GKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKGPVCGSD 366
P+C + ++ C Q ++ + G CQ + + C C P CG +
Sbjct: 119 PICAQSCNNQCSSSCGNSAPQIVVLQPQQNQCGSCQSSCQQTCPTCNCQSACAPACGGN 177
>U53141-1|AAA96103.1| 322|Caenorhabditis elegans Serpentine
receptor, class x protein117 protein.
Length = 322
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 205 RMFKIINIQFLMLNFSYILERAL--IFLIKMKNK*YKNVK 92
++F ++ QFL L+FS + RAL + KM + K V+
Sbjct: 251 KLFPVLFFQFLTLSFSMVFLRALEGFIMFKMNERIDKGVR 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,186,425
Number of Sequences: 27780
Number of extensions: 249305
Number of successful extensions: 641
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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