Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J18
         (549 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              32   0.003
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.0  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   6.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   6.2  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    21   8.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 545 YAPVCGSNGKTYANKCSL 492
           + PVC SNGK YAN C L
Sbjct: 114 HRPVCASNGKIYANHCEL 131



 Score = 30.3 bits (65), Expect = 0.013
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -2

Query: 443 ECQGAKLASLHPCICTRE----KGPVCGSDGVTYSNLCLLKCAS 324
           EC+ +  +++  C+C R+      PVC S+G  Y+N C L  A+
Sbjct: 92  ECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAA 135


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 254 N*NHSNKYIVTDAN*RENV*NNKYSVFNVEFQL 156
           N    N+Y++  ++  +NV NN  ++ +V FQ+
Sbjct: 368 NNTQRNEYLLALSDRNQNVLNNDLNLEHVNFQI 400


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 464 LKMEHDGECQGAKLASLHP 408
           L+M  DG C+     S HP
Sbjct: 106 LRMSADGGCRNFSTCSSHP 124


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 464 LKMEHDGECQGAKLASLHP 408
           L+M  DG C+     S HP
Sbjct: 105 LRMSADGGCRNFSTCSSHP 123


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 239 SNGFSFPPPTLCYYR 283
           ++G+ F PP   +YR
Sbjct: 69  ASGYGFVPPNQAFYR 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,484
Number of Sequences: 438
Number of extensions: 3402
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)