Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J16
         (399 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyc...   123   9e-30
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc...    34   0.007
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch...    29   0.27 
SPBC12C2.04 |||NAD binding dehydrogenase family protein|Schizosa...    28   0.61 
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po...    25   3.3  
SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe...    25   3.3  
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote...    25   4.3  
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ...    24   7.6  
SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr...    24   7.6  
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    24   7.6  
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha...    24   10.0 
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch...    24   10.0 
SPAC3G9.04 |ssu72||phosphoric ester hydrolase |Schizosaccharomyc...    24   10.0 
SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyc...    24   10.0 

>SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 218

 Score =  123 bits (297), Expect = 9e-30
 Identities = 65/126 (51%), Positives = 83/126 (65%), Gaps = 8/126 (6%)
 Frame = +3

Query: 45  SRRIGSVIRTIGASRQKHT---LPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAA 215
           S+   + IR +  +R  HT   LP LP+ Y+ALEP +S  IM LHH KHH TYVNNLNAA
Sbjct: 6   SKNSVAAIRNVSIARGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAA 65

Query: 216 EEKLTQAQAKGDIDTIISLAPALKFNGGGHINHSIFWKNLSP---NGGEP--SDVLTKAV 380
           +EKL  A    D++  ++L  A+KFNGGGHINHS+FWK L+P    GG+P  S  L KA+
Sbjct: 66  QEKL--ADPNLDLEGEVALQAAIKFNGGGHINHSLFWKILAPQKEGGGKPVTSGSLHKAI 123

Query: 381 EKDFGS 398
              +GS
Sbjct: 124 TSKWGS 129


>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 781

 Score = 34.3 bits (75), Expect = 0.007
 Identities = 32/100 (32%), Positives = 43/100 (43%)
 Frame = +3

Query: 87  RQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDTII 266
           RQKHT P  P   SA     SR     HH  HH+   N L    EK      K + ++  
Sbjct: 97  RQKHTAPATPIPVSA-----SR-----HHKPHHSGLKNLL----EKAMHPGHKSNANSPT 142

Query: 267 SLAPALKFNGGGHINHSIFWKNLSPNGGEPSDVLTKAVEK 386
           S +P+  F  G  IN+ I  KN S +   P +  +  + K
Sbjct: 143 SESPSKGF--GSFINNHILHKNTSSHPSSPVNGKSSDIHK 180


>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 870

 Score = 29.1 bits (62), Expect = 0.27
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 260 YHQSGTSTKIQWRWSHQPLYFL 325
           +H +  S KI+W WS+Q L+ L
Sbjct: 133 FHSNENSKKIEWTWSNQSLHTL 154


>SPBC12C2.04 |||NAD binding dehydrogenase family
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 384

 Score = 27.9 bits (59), Expect = 0.61
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +3

Query: 162 NLHHS--KHHATYVNNLNAAEEKLTQAQAKGDIDTIISLAPAL-KFNGGGHINHSIFWKN 332
           NL H   K+HA           K+ QA  K   D  +++A  + ++N     N+ +FW  
Sbjct: 150 NLVHELEKYHAIISIGYMFRYLKIVQAAKKYVADNNLNIACTIARYNSAYEHNNKLFWWY 209

Query: 333 LSPNGG 350
           +S +GG
Sbjct: 210 MSKSGG 215


>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 2812

 Score = 25.4 bits (53), Expect = 3.3
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -2

Query: 269  TDDSINITFSLSLCQFLLGSI*IVNISSMMLGVMQI 162
            TD+ + +T S  LC FL  S   +  + +++ V++I
Sbjct: 1338 TDEELQVTISFRLCAFLCFSDPFITSNYLVMIVLRI 1373


>SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 350

 Score = 25.4 bits (53), Expect = 3.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 294 GGGHINHSIFWKNLSPNGGEPSDVLTKAVEKD 389
           GGG + H I   NL  NG E S  +  A E D
Sbjct: 275 GGGVVKHHICNANLMRNGAEWSVYINSANEFD 306


>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
           kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 678

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +3

Query: 126 SALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDT 260
           SAL+ V +    ++HH +H  T + + NA+  +++ +    D+++
Sbjct: 91  SALKEVNTPAYQSMHHFEHLITPLPSTNASHSEVSLSAGVNDLNS 135


>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 1429

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 282  LKFNGGGHINHSIFWKNLSPNGGEPSDVLTK 374
            LK NG       +  KNL+P   E +D++ +
Sbjct: 1104 LKLNGESAFKSKVIKKNLNPVWNEEADIVVQ 1134


>SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 376

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 174 SKHHATYVNNLNAAEEKLTQAQAKGDIDTIISLAP 278
           SKHH TYV     AE+ + +AQ      T++S  P
Sbjct: 173 SKHHITYVPK-QEAEDTIIKAQVH---KTLVSAGP 203


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 271 WHQH*NSMEVVTSTTLFFGRIYHQTVANLLMC*PKQLKKIL 393
           W ++       T+T+LF+G + HQ  +N  +  PK L + L
Sbjct: 243 WVEYAEDSAYNTNTSLFYGVVGHQNGSNGFIS-PKNLTRDL 282


>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
           Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 884

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = +3

Query: 39  LASRRIGSVIRTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHAT 191
           L   ++ +  R I  +++  TL EL +  +   P++ +   + HH K  ++
Sbjct: 63  LDRNQVYACFRLISQAQRGATLQELDYNKAGDPPILPKQAKDDHHIKRSSS 113


>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 546

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 56  WICYPHH 76
           W CYPHH
Sbjct: 435 WTCYPHH 441


>SPAC3G9.04 |ssu72||phosphoric ester hydrolase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 197

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 177 WSDANSLYHG*SRVPERCTRKVIREAYVFDETL 79
           W D +S+Y+      ERC   +  + Y   ETL
Sbjct: 99  WQDQDSIYNIVITCEERCYDAICEDLYRRGETL 131


>SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 266

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 257 YYHQSGTSTKIQWRWSHQPLYFLEEFITKRWRTF 358
           Y   +  STKI +  S    Y L  ++   W+ F
Sbjct: 200 YVMSNSVSTKIHFVGSEYGSYLLNSYLDLNWKKF 233


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,704,804
Number of Sequences: 5004
Number of extensions: 32593
Number of successful extensions: 74
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)