Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J16
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 161 2e-40
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 161 2e-40
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 161 2e-40
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 160 3e-40
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 160 3e-40
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 160 3e-40
U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF039046-13|AAB94213.1| 551|Caenorhabditis elegans Hypothetical... 28 2.8
U80450-2|AAK77614.1| 252|Caenorhabditis elegans Hypothetical pr... 27 3.7
U80450-1|AAK77613.1| 244|Caenorhabditis elegans Hypothetical pr... 27 3.7
U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z81122-11|CAB61031.1| 447|Caenorhabditis elegans Hypothetical p... 26 8.7
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 26 8.7
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 26 8.7
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 26 8.7
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 26 8.7
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 26 8.7
AF114440-1|AAD13294.1| 447|Caenorhabditis elegans delta5-fatty ... 26 8.7
AF078796-1|AAC95143.1| 447|Caenorhabditis elegans delta 5 fatty... 26 8.7
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 161 bits (390), Expect = 2e-40
Identities = 71/106 (66%), Positives = 85/106 (80%)
Frame = +3
Query: 81 ASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDT 260
A R KHTLP+LPF+Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +KG++
Sbjct: 21 AVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKE 80
Query: 261 IISLAPALKFNGGGHINHSIFWKNLSPNGGEPSDVLTKAVEKDFGS 398
I+L PALKFNGGGHINHSIFW NL+ +GGEPS L +++DFGS
Sbjct: 81 AIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGS 126
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 161 bits (390), Expect = 2e-40
Identities = 71/106 (66%), Positives = 85/106 (80%)
Frame = +3
Query: 81 ASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDT 260
A R KHTLP+LPF+Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +KG++
Sbjct: 21 AVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKE 80
Query: 261 IISLAPALKFNGGGHINHSIFWKNLSPNGGEPSDVLTKAVEKDFGS 398
I+L PALKFNGGGHINHSIFW NL+ +GGEPS L +++DFGS
Sbjct: 81 AIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGS 126
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 161 bits (390), Expect = 2e-40
Identities = 71/106 (66%), Positives = 85/106 (80%)
Frame = +3
Query: 81 ASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKGDIDT 260
A R KHTLP+LPF+Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +KG++
Sbjct: 21 AVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKE 80
Query: 261 IISLAPALKFNGGGHINHSIFWKNLSPNGGEPSDVLTKAVEKDFGS 398
I+L PALKFNGGGHINHSIFW NL+ +GGEPS L +++DFGS
Sbjct: 81 AIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGS 126
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 160 bits (389), Expect = 3e-40
Identities = 71/111 (63%), Positives = 87/111 (78%)
Frame = +3
Query: 66 IRTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAK 245
I + A R KH+LP+LP++Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +K
Sbjct: 16 ITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 246 GDIDTIISLAPALKFNGGGHINHSIFWKNLSPNGGEPSDVLTKAVEKDFGS 398
G++ I+L PALKFNGGGHINHSIFW NL+ +GGEPS L A++ DFGS
Sbjct: 76 GNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDFGS 126
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 160 bits (389), Expect = 3e-40
Identities = 71/111 (63%), Positives = 87/111 (78%)
Frame = +3
Query: 66 IRTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAK 245
I + A R KH+LP+LP++Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +K
Sbjct: 16 ITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 246 GDIDTIISLAPALKFNGGGHINHSIFWKNLSPNGGEPSDVLTKAVEKDFGS 398
G++ I+L PALKFNGGGHINHSIFW NL+ +GGEPS L A++ DFGS
Sbjct: 76 GNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDFGS 126
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 160 bits (389), Expect = 3e-40
Identities = 71/111 (63%), Positives = 87/111 (78%)
Frame = +3
Query: 66 IRTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAK 245
I + A R KH+LP+LP++Y+ LEPVIS +IM LHH KHHATYVNNLN EEKL +A +K
Sbjct: 16 ITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 246 GDIDTIISLAPALKFNGGGHINHSIFWKNLSPNGGEPSDVLTKAVEKDFGS 398
G++ I+L PALKFNGGGHINHSIFW NL+ +GGEPS L A++ DFGS
Sbjct: 76 GNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDFGS 126
>U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical
protein C06A5.6 protein.
Length = 691
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 31 SRCWHLAELDLLSAP*ERLVKNIRFPNYLS 120
S+C H++++D+L +IRFP+YL+
Sbjct: 69 SKCRHISDVDILELKKNTANADIRFPSYLN 98
>AF039046-13|AAB94213.1| 551|Caenorhabditis elegans Hypothetical
protein R09B5.4 protein.
Length = 551
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 248 TFSLSLCQFLLGSI*IVNISSMMLGVMQI 162
+F +SLC L+G + +V+I + GV+Q+
Sbjct: 81 SFCVSLCMDLMGGMRVVSIEQLFEGVLQM 109
>U80450-2|AAK77614.1| 252|Caenorhabditis elegans Hypothetical
protein M01E11.4b protein.
Length = 252
Score = 27.5 bits (58), Expect = 3.7
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +3
Query: 69 RTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKG 248
R + SR P +PFE+ E +RD++ HH K A Y NA E A KG
Sbjct: 146 RVLSRSRFNPHQP-IPFEWVQGEQYRNRDVLGFHHHK-IAKY--EANADEVLFGDADVKG 201
>U80450-1|AAK77613.1| 244|Caenorhabditis elegans Hypothetical
protein M01E11.4a protein.
Length = 244
Score = 27.5 bits (58), Expect = 3.7
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +3
Query: 69 RTIGASRQKHTLPELPFEYSALEPVISRDIMNLHHSKHHATYVNNLNAAEEKLTQAQAKG 248
R + SR P +PFE+ E +RD++ HH K A Y NA E A KG
Sbjct: 138 RVLSRSRFNPHQP-IPFEWVQGEQYRNRDVLGFHHHK-IAKY--EANADEVLFGDADVKG 193
>U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical
protein F18F11.3 protein.
Length = 427
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 387 LFQLLWSTHQKVRHRLVIN 331
+F LLW H KV H VIN
Sbjct: 59 IFLLLWVNHNKVIHTQVIN 77
>Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical
protein T02D1.6 protein.
Length = 433
Score = 26.2 bits (55), Expect = 8.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 59 ICYPHHRSVSSKTY 100
+CYPHH + S+T+
Sbjct: 169 VCYPHHHRLRSRTF 182
>Z81122-11|CAB61031.1| 447|Caenorhabditis elegans Hypothetical
protein T13F2.1 protein.
Length = 447
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 260 YHQSGTSTKIQWRWSHQPLYFLEEFITK 343
Y Q G S + W WS LYFL ++ T+
Sbjct: 293 YEQVGLS--LHWAWSLGQLYFLPDWSTR 318
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 168 HHSKHHAT-YVNNLNAAEEKLTQAQAK 245
HH K+HA+ NN N EEK +Q +
Sbjct: 116 HHGKNHASPTTNNNNNTEEKYEDSQGQ 142
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 105 PELPFEYSALEPVISRDIMNLHHSKHHATYVNNL 206
P LP S + S + + HH+ HH T+ +N+
Sbjct: 126 PALPSTPSRVPHHPSSQVHHFHHNLHHHTHTHNV 159
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 105 PELPFEYSALEPVISRDIMNLHHSKHHATYVNNL 206
P LP S + S + + HH+ HH T+ +N+
Sbjct: 126 PALPSTPSRVPHHPSSQVHHFHHNLHHHTHTHNV 159
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 105 PELPFEYSALEPVISRDIMNLHHSKHHATYVNNL 206
P LP S + S + + HH+ HH T+ +N+
Sbjct: 126 PALPSTPSRVPHHPSSQVHHFHHNLHHHTHTHNV 159
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 105 PELPFEYSALEPVISRDIMNLHHSKHHATYVNNL 206
P LP S + S + + HH+ HH T+ +N+
Sbjct: 126 PALPSTPSRVPHHPSSQVHHFHHNLHHHTHTHNV 159
>AF114440-1|AAD13294.1| 447|Caenorhabditis elegans delta5-fatty
acid desaturase protein.
Length = 447
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 260 YHQSGTSTKIQWRWSHQPLYFLEEFITK 343
Y Q G S + W WS LYFL ++ T+
Sbjct: 293 YEQVGLS--LHWAWSLGQLYFLPDWSTR 318
>AF078796-1|AAC95143.1| 447|Caenorhabditis elegans delta 5 fatty
acid desaturase protein.
Length = 447
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 260 YHQSGTSTKIQWRWSHQPLYFLEEFITK 343
Y Q G S + W WS LYFL ++ T+
Sbjct: 293 YEQVGLS--LHWAWSLGQLYFLPDWSTR 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,425,218
Number of Sequences: 27780
Number of extensions: 184736
Number of successful extensions: 442
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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