Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J15
(418 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 5e-20
SB_5622| Best HMM Match : DUF6 (HMM E-Value=2.6e-12) 35 0.023
SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24) 31 0.38
SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38) 29 2.0
SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10) 28 3.6
SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022) 28 3.6
SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 27 4.7
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_55492| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_4823| Best HMM Match : HTH_1 (HMM E-Value=4.5e-18) 27 6.2
SB_43445| Best HMM Match : PDZ (HMM E-Value=8.9e-07) 27 8.2
SB_16553| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_4149| Best HMM Match : VWA (HMM E-Value=0) 27 8.2
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 27 8.2
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 93.9 bits (223), Expect = 5e-20
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = +1
Query: 280 VAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLA 417
VAKQLK+QQMVMRGHRD SM+HELNRYIPTAAAFGGLCIGALSVLA
Sbjct: 998 VAKQLKDQQMVMRGHRDKSMVHELNRYIPTAAAFGGLCIGALSVLA 1043
>SB_5622| Best HMM Match : DUF6 (HMM E-Value=2.6e-12)
Length = 224
Score = 35.1 bits (77), Expect = 0.023
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 139 YYLSPPESLSHIGQDPIHALLYIFFMLGSCAFFSKTWIDVSGSSA 273
YY++ PE HI ++ ++ ++Y F+ + + TW ++ SS+
Sbjct: 116 YYVNKPEKFHHIPREEVYPIVYAIFIASALCYLLITWCNMQISSS 160
>SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24)
Length = 1193
Score = 31.1 bits (67), Expect = 0.38
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 31 MLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPESLSHIGQDPIHALLYIF 210
+L+V + LLG W+D G A A P+ G + + + + P+ LL
Sbjct: 117 VLSVSTPSLLVALLLGAWSDRAGRRRAMAMPIFGSAVESAIILVIMYF-ELPVTFLLLAE 175
Query: 211 FMLGSCAFF 237
F+ GSC FF
Sbjct: 176 FINGSCGFF 184
>SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38)
Length = 1523
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -2
Query: 246 GLREERAGAEHEEDVEQRVNGVLTDVREGL-RGGQVVAEPPDGIGARGAAAPHVRPHTQQ 70
G EE E EE+ E+ + LT E RGG V+ DGI + +
Sbjct: 1385 GEEEEEEEEEEEEEEEEEDSASLTSSLESENRGGDVLGHAIDGIEVIDLSGIREATRLEI 1444
Query: 69 VHQEVTAELYCQHLR 25
V + + Y H+R
Sbjct: 1445 VPRHLRINNYMAHIR 1459
>SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10)
Length = 460
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 189 NGVLTDVREGLRGGQVVAEPPDGIGARGAAAPHVRPHTQQV 67
N ++ +R GL GG+ P +GA+ +V P T ++
Sbjct: 122 NRKISRLRRGLLGGRKAETEPRNLGAKSRLTANVNPFTPEL 162
>SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022)
Length = 664
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 86 RTWGAAAPRAPIPSGGSATTCPPRSPSRTSV 178
R A P P+P+ G+ TT P PSR+++
Sbjct: 465 RQGAVAPPLPPLPTQGAVTTPLPPLPSRSTI 495
>SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 95 GAAAPRA---PIPSGGSATTCPPRSPSRTSVRTPF 190
G AAP P P +A T PP SPS R PF
Sbjct: 743 GPAAPPGIYLPPPPAATAATPPPSSPSGDEWRQPF 777
>SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1227
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 95 GAAAPRAPIPSGGSATTCPPR--SPSRTSVRT 184
G A P+P GG+A PPR +PSR+ T
Sbjct: 463 GETAVCPPLPGGGTAERLPPRQSAPSRSMAIT 494
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 83 GRTWGAAAPRAPIPSGGSATTCPPRSPSRTSVRTPF 190
G+T A A +P+ S P +PS+T+VR F
Sbjct: 531 GQTTKAGARPTLLPTSSSTPCATPTTPSKTNVRERF 566
>SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 318 RTSRQLDDPRTEPLHPDGGRLRWSLYRSS 404
R+SR+++ EP P+G +++SLYRSS
Sbjct: 694 RSSREVEALWREPAVPNGIVVQYSLYRSS 722
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 338 IELSRCPRITICCSFNCFATSLAEDPETSIQVLEKNAQE 222
+ + C R+ I C NC T +A + I+ +EK+ Q+
Sbjct: 115 VHIEACKRVPIKCVNNCGRTDIAREEVKRIE-MEKHLQD 152
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 95 GAAAPRAPIPSGGSATTCPPRSP 163
G AP P P GGSA PP P
Sbjct: 967 GGGAPPLPPPPGGSAPPPPPPPP 989
>SB_55492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 174 DVREGLRGGQVVAEPPDGIGARGAAAPHVRPHTQQVHQEVTAELYCQHLRYDVEVGNK 1
DVR+G G + + P G G V+P+ VH +T + L +GN+
Sbjct: 330 DVRQGRPGETIAVQTPLGWTLFGRLGRAVQPNLMHVHSNLTLLKVGELLTSSEVLGNR 387
>SB_4823| Best HMM Match : HTH_1 (HMM E-Value=4.5e-18)
Length = 419
Score = 27.1 bits (57), Expect = 6.2
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -2
Query: 207 DVEQRVNGV-LTDVREGLRGGQVVAEPPDGIGARGAAAPHVRPHT-QQVHQEVTAELYCQ 34
+++ +NG+ V + GQVV P + GAA P T V + T ELY +
Sbjct: 231 EIQAALNGLKFGSVEITVHNGQVVQIEPSALTIAGAAGPAAAAETLLNVSYDPTRELYSE 290
>SB_43445| Best HMM Match : PDZ (HMM E-Value=8.9e-07)
Length = 373
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 77 VCGRTWGAAAPRAPIPSGGSATTCPPRSPSRTSVRTP 187
V GR A + TT PPR SR S ++P
Sbjct: 268 VIGRNKDALPSAGNATAASPVTTAPPRQTSRRSTKSP 304
>SB_16553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 921
Score = 26.6 bits (56), Expect = 8.2
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -2
Query: 195 RVNGVLTDVREGLRGGQVVAEPPD-GIGARGAAAPHVRP--HTQQVHQEVTAE 46
+ NG + +RE L G + EPP I + A+A P HT Q+ E+T +
Sbjct: 244 KTNGYI--LRESLNSGPIPTEPPQKSITLQVASARKDPPGAHTHQIITEITPD 294
>SB_4149| Best HMM Match : VWA (HMM E-Value=0)
Length = 1141
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 77 VC-GRTWGAAAPRAPIPSGGSATTCPPR 157
+C G +G P P+P GG TCPP+
Sbjct: 649 ICRGSIYGKCPPPPPLPPGG---TCPPQ 673
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 345 RTEPLHPDGGRLRWSLYRS 401
+TEP DGG + WS YR+
Sbjct: 1892 KTEPFENDGGDVVWSPYRA 1910
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 26.6 bits (56), Expect = 8.2
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Frame = -2
Query: 381 EGGRRRDVAVQFVDHRVVAMSAHHHLLLFQLL---RNI-LSGGS-GDIDPGLREERAGA- 220
E R DV V+ +D +++S + + +N+ +SGGS G +D + + G
Sbjct: 1301 EQSAREDVIVRVMDDHGLSLSQRFTVQVLDANDKPQNVSMSGGSVGHVDENMNDALVGVL 1360
Query: 219 -------EHEEDVEQRVNGVLTDVREGLRGGQVVAEPPDGIGARGA 103
E D++ N VL + G ++ PD G RGA
Sbjct: 1361 SAVRDVNEMPTDIQLSNNSVLENSPAWTPVGGIIVIDPDNQGPRGA 1406
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,741,769
Number of Sequences: 59808
Number of extensions: 217162
Number of successful extensions: 721
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 777158991
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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