Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J14
(552 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.7
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.7
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 3.6
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 4.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 4.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 4.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 4.8
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 22 4.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 6.3
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 8.3
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 251 KYRLAKLKSKISKTASKDRELSLRPSKVLPLSMASIQKN 367
KYR + +SK +RE S P + LS +I N
Sbjct: 55 KYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNN 93
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 2.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 251 KYRLAKLKSKISKTASKDRELSLRPSKVLPLSMASIQKN 367
KYR + +SK +RE S P + LS +I N
Sbjct: 55 KYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNN 93
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 76 YKMA---RLLFVFLIPALLVLSIPLYLF 150
+KMA + +F+ ++P LLV+ P Y F
Sbjct: 339 HKMAPWVKRVFIHILPRLLVMRRPQYKF 366
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 76 YKMA---RLLFVFLIPALLVLSIPLYLF 150
+KMA + +F+ ++P LLV+ P Y F
Sbjct: 339 HKMAPWVKRVFIHILPRLLVMRRPQYKF 366
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 3.6
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -3
Query: 238 CWCPAFLCVVVD 203
CW P F C ++D
Sbjct: 631 CWLPFFTCNIMD 642
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 254 YRLAKLKSKISKTASKDRELSLRPSKVLPLSMASIQKN 367
YR + SK K+RE S P + LS +I N
Sbjct: 56 YRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNN 93
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 254 YRLAKLKSKISKTASKDRELSLRPSKVLPLSMASIQKN 367
YR + SK K+RE S P + LS +I N
Sbjct: 56 YRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNN 93
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 254 YRLAKLKSKISKTASKDRELSLRPSKVLPLSMASIQKN 367
YR + SK K+RE S P + LS +I N
Sbjct: 56 YRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNN 93
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 254 YRLAKLKSKISKTASKDRELSLRPSKVLPLSMASIQKN 367
YR + SK K+RE S P + LS +I N
Sbjct: 56 YRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNN 93
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +1
Query: 325 LEGIAFEYGFNTKELDHWLK--YWSEEYPFAE 414
+EG +GF + L H++K Y E F E
Sbjct: 254 VEGKRIPFGFRKRTLPHFIKDDYGPESRGFVE 285
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 254 YRLAKLKSKISKTASKDRELSLRPSKVLPLSMASIQKN 367
YR + SK K+RE S P + LS +I N
Sbjct: 289 YRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNN 326
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -1
Query: 513 HSSWDLR-CDSYKVNIQTL 460
H S D++ CDS K+ +TL
Sbjct: 318 HHSTDIQNCDSVKIKFETL 336
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 6.3
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 251 KYRLAKLKSKISKTASKDRELSLRPSKVLPLSMASIQKN*ITGSNTGQKN 400
+YR + +SK +RE S P + LS +I N +N N
Sbjct: 288 EYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNN 337
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +3
Query: 426 PQQIPSVYNQHPGFEYSLYKSHTEGPSWSGDCS 524
PQ+I +V + +Y + T SW +C+
Sbjct: 40 PQRIHTVRTRGGNKKYRALRLDTGNFSWGSECT 72
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,568
Number of Sequences: 438
Number of extensions: 3644
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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