Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J13
         (438 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35719-3|CAA84797.1|  347|Caenorhabditis elegans Hypothetical pr...    31   0.48 
AC006761-5|AAF60550.3|  425|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF024494-8|ABQ13073.1|  256|Caenorhabditis elegans Hypothetical ...    28   3.4  
Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z68105-2|CAA92118.1|  270|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z92830-7|CAB07360.1|  659|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AF016684-10|AAB66205.1|  340|Caenorhabditis elegans Hypothetical...    27   7.9  

>Z35719-3|CAA84797.1|  347|Caenorhabditis elegans Hypothetical
           protein F17C8.5 protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 187 YYSLLVVIVFVELRLGFGNC*DHFVYIVTSLLPTAISLTKY 309
           +YSLL++ VF+  +  FG    HF+ +V++    A+    Y
Sbjct: 141 FYSLLMIPVFIAFKFEFGTFLAHFLVVVSNRTRLAVKKAYY 181


>AC006761-5|AAF60550.3|  425|Caenorhabditis elegans Hypothetical
           protein Y41G9A.3 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 273 KSFANCHISYQIRR--ELSTQIRCSRMPISNGKR*DTAVRLEHRR 401
           K F N  +   I R  EL T+ R  R+P+ + K  D A  L HRR
Sbjct: 208 KPFINIGLKESIFRAVELLTKYRIHRLPVMDEKTGDCAYILTHRR 252


>AF024494-8|ABQ13073.1|  256|Caenorhabditis elegans Hypothetical
           protein C38C3.3 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 431 ALTTAIQGRCSPMFESYRSISTFTVRNGHTRTTN 330
           A T  +Q RC P  +SY+ I  F  R+   +  N
Sbjct: 97  AATEVVQDRCHPQPKSYQKIRIFNHRDDEVKIDN 130


>Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical
           protein T06G6.1 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 100 YFYNMTNPWS*LPFSKITYSHTLT*LKDKYYSLLVVIVFVEL 225
           YFY +TN +S      +T+   ++  K KYY +    + + L
Sbjct: 114 YFYYLTNYFSTYSVFSLTFDRLISHYKSKYYHMHQYFIAISL 155


>Z68105-2|CAA92118.1|  270|Caenorhabditis elegans Hypothetical
           protein F13E6.3 protein.
          Length = 270

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -1

Query: 420 CDSGQMFSDVRVVPQYLNVYRSKWAYENNEFVLTVPY--VFGKRYGSWQKTCDDVNEVIL 247
           CD  ++F  + ++ +   VY  KW    +  ++   +     +R  SW+K   +  EV+L
Sbjct: 104 CDHPRIFQ-MHLIERASKVY--KWTETADSIIVDDQFGTYISERISSWRKILAESREVVL 160

Query: 246 TVPE 235
           + PE
Sbjct: 161 SYPE 164


>Z92830-7|CAB07360.1|  659|Caenorhabditis elegans Hypothetical
           protein F11A5.8 protein.
          Length = 659

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 151 TYSHTLT*LKDKYYSLLVVIVFVELRLGFGN 243
           T+ HT +   +  + LLV ++FV L++GF N
Sbjct: 133 TFIHTWSLGVEMQFYLLVPLIFVALQIGFPN 163


>AF016684-10|AAB66205.1|  340|Caenorhabditis elegans Hypothetical
           protein F45C12.6 protein.
          Length = 340

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 243 LLGSLRLHRHKSFANCHISY 302
           L+G  +LH +K+F +CH +Y
Sbjct: 143 LVGDKKLHVNKAFLSCHSTY 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,758,031
Number of Sequences: 27780
Number of extensions: 169809
Number of successful extensions: 430
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)