Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J12
         (551 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28936| Best HMM Match : PAPA-1 (HMM E-Value=8.6)                    30   1.4  
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.9  
SB_42822| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_5613| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.8  
SB_57305| Best HMM Match : rve (HMM E-Value=6.6e-22)                   27   7.7  
SB_51200| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_43123| Best HMM Match : rve (HMM E-Value=6e-18)                     27   7.7  
SB_39709| Best HMM Match : rve (HMM E-Value=6e-18)                     27   7.7  
SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24)                  27   7.7  
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)                  27   7.7  
SB_25327| Best HMM Match : rve (HMM E-Value=6.6e-22)                   27   7.7  
SB_19527| Best HMM Match : rve (HMM E-Value=1e-20)                     27   7.7  
SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)                  27   7.7  
SB_53754| Best HMM Match : M-factor (HMM E-Value=5.8)                  27   7.7  
SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22)                   27   7.7  
SB_46067| Best HMM Match : rve (HMM E-Value=6e-18)                     27   7.7  
SB_34611| Best HMM Match : rve (HMM E-Value=6.6e-22)                   27   7.7  
SB_25480| Best HMM Match : rve (HMM E-Value=6.6e-22)                   27   7.7  
SB_16064| Best HMM Match : rve (HMM E-Value=6.6e-22)                   27   7.7  
SB_11383| Best HMM Match : rve (HMM E-Value=2.3e-18)                   27   7.7  

>SB_28936| Best HMM Match : PAPA-1 (HMM E-Value=8.6)
          Length = 339

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 391 DMGVYKEVRVNLVRSG*SNTDAVRPVEDCSSESIY 287
           +MG    V+ N +RSG  +TD   PV    S+S+Y
Sbjct: 151 NMGWASNVKDNWIRSGDYHTDTAHPVNITDSQSLY 185


>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5445

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +2

Query: 353  YEIYPYFFVDSHVINKAFMMKMTK 424
            +++YP F++D+H+ NKA +  + K
Sbjct: 1787 HDVYPQFYLDTHLTNKAVLEAVDK 1810


>SB_42822| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 416

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 30  RTSRKSRGNICWRKTRTSTRNPMLLRNSWRPSKW 131
           R  + S   I WR    S+R+P L+R S   S W
Sbjct: 205 RIIKNSNYEILWRALGLSSRSPTLMRGSLTVSVW 238


>SB_5613| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 162

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +3

Query: 3   TTYCSQLCTRTSRKSRGNICWRKTRTSTRNPMLLRNSWRPSKWACYRVVRSSFTQMRCK 179
           TT+   +CT T   ++ N+ W+   + TR+      +W   KW   R    +   M  K
Sbjct: 5   TTWRGNVCTHTRHGAKDNMAWKWMHSHTRHGAKDNMAW---KWMLSRTRHGAKDNMAWK 60


>SB_57305| Best HMM Match : rve (HMM E-Value=6.6e-22)
          Length = 351

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 5   IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 58

Query: 36  MSSY 25
            S Y
Sbjct: 59  YSKY 62


>SB_51200| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 938

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 660 IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 713

Query: 36  MSSY 25
            S Y
Sbjct: 714 YSKY 717


>SB_43123| Best HMM Match : rve (HMM E-Value=6e-18)
          Length = 400

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 229 IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 282

Query: 36  MSSY 25
            S Y
Sbjct: 283 YSKY 286


>SB_39709| Best HMM Match : rve (HMM E-Value=6e-18)
          Length = 383

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 212 IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 265

Query: 36  MSSY 25
            S Y
Sbjct: 266 YSKY 269


>SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24)
          Length = 1497

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -1

Query: 173  THLCERRPHHAVACPF*RSP*IS-*QHRISSTCPCFPPAYIP 51
            T L ERR  H V+C   RSP  S  Q R     P  P A+ P
Sbjct: 1275 TELTERRKRHFVSCNTLRSPVASEPQGREGLRAPKMPSAHTP 1316


>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
          Length = 722

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 400 SLHDEDD*SCHRPCAYEL 453
           ++HD+DD  C R CA+ L
Sbjct: 117 TIHDDDDAECRRCCAFNL 134


>SB_25327| Best HMM Match : rve (HMM E-Value=6.6e-22)
          Length = 319

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 23  IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 76

Query: 36  MSSY 25
            S Y
Sbjct: 77  YSKY 80


>SB_19527| Best HMM Match : rve (HMM E-Value=1e-20)
          Length = 311

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 83  IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 136

Query: 36  MSSY 25
            S Y
Sbjct: 137 YSKY 140


>SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
          Length = 1432

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207  MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
            ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 876  IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 929

Query: 36   MSSY 25
             S Y
Sbjct: 930  YSKY 933


>SB_53754| Best HMM Match : M-factor (HMM E-Value=5.8)
          Length = 412

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 331 IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 384

Query: 36  MSSY 25
            S Y
Sbjct: 385 YSKY 388


>SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22)
          Length = 800

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 520 IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 573

Query: 36  MSSY 25
            S Y
Sbjct: 574 YSKY 577


>SB_46067| Best HMM Match : rve (HMM E-Value=6e-18)
          Length = 254

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 83  IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 136

Query: 36  MSSY 25
            S Y
Sbjct: 137 YSKY 140


>SB_34611| Best HMM Match : rve (HMM E-Value=6.6e-22)
          Length = 875

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 529 IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 582

Query: 36  MSSY 25
            S Y
Sbjct: 583 YSKY 586


>SB_25480| Best HMM Match : rve (HMM E-Value=6.6e-22)
          Length = 373

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 27  IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 80

Query: 36  MSSY 25
            S Y
Sbjct: 81  YSKY 84


>SB_16064| Best HMM Match : rve (HMM E-Value=6.6e-22)
          Length = 371

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 158 IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 211

Query: 36  MSSY 25
            S Y
Sbjct: 212 YSKY 215


>SB_11383| Best HMM Match : rve (HMM E-Value=2.3e-18)
          Length = 1003

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 MRKTLTACSICNAFV*TKTSPRGSM---PILKVSMNFVTTSDFEYLSVFSSSIYSLATSL 37
           ++  +++CSICNAF      PR ++    +  +    ++T  FEY    +   Y L T L
Sbjct: 699 IKDKISSCSICNAF--RNQQPRETLLPREVPGLPWQVISTDIFEY----AGHSYLLVTDL 752

Query: 36  MSSY 25
            S Y
Sbjct: 753 YSKY 756


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,736,864
Number of Sequences: 59808
Number of extensions: 389536
Number of successful extensions: 949
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)