Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J12
(551 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55480.1 68418.m06910 glycerophosphoryl diester phosphodieste... 31 0.68
At5g58050.1 68418.m07265 glycerophosphoryl diester phosphodieste... 30 0.89
At5g20940.1 68418.m02488 glycosyl hydrolase family 3 protein bet... 30 0.89
At4g26690.1 68417.m03846 glycerophosphoryl diester phosphodieste... 29 1.6
At5g27290.1 68418.m03258 expressed protein predicted proteins, A... 28 3.6
At2g27110.2 68415.m03258 far-red impaired responsive protein, pu... 28 3.6
At2g27110.1 68415.m03257 far-red impaired responsive protein, pu... 28 3.6
At1g43780.1 68414.m05043 serine carboxypeptidase S10 family prot... 28 3.6
At5g66520.1 68418.m08387 pentatricopeptide (PPR) repeat-containi... 28 4.8
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 28 4.8
At1g66970.1 68414.m07615 glycerophosphoryl diester phosphodieste... 28 4.8
At3g17180.1 68416.m02191 serine carboxypeptidase S10 family prot... 27 6.3
At1g03190.2 68414.m00297 DNA repair protein / transcription fact... 27 6.3
At1g03190.1 68414.m00296 DNA repair protein / transcription fact... 27 6.3
At3g47000.1 68416.m05104 glycosyl hydrolase family 3 protein bet... 27 8.3
At1g79340.1 68414.m09246 latex-abundant protein, putative (AMC7)... 27 8.3
At1g77800.1 68414.m09059 PHD finger family protein contains Pfam... 27 8.3
At1g19570.1 68414.m02437 dehydroascorbate reductase, putative si... 27 8.3
At1g19550.1 68414.m02435 dehydroascorbate reductase, putative si... 27 8.3
>At5g55480.1 68418.m06910 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 766
Score = 30.7 bits (66), Expect = 0.68
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Frame = +2
Query: 20 TVYEDIKEVAREYM--LEENTDKYSKSDVVTK--FMETFKMGMLPRGEVFVHTNALQMEQ 187
TVY+ ++E R+ + E+ K++ + V++K T + + ++ Q+
Sbjct: 562 TVYK-VEETIRDILDTAIEDIKKFADAVVISKKSVFPTSESFTTGQTKLVERLQKFQLPV 620
Query: 188 AVKVFRILYFAKDYDYFIKTACWLRER-----INGGMFVYALTAAVFHRSDCVGITLPAP 352
V+VFR + ++ +D+F + ING + + LTAA + R+ C+ P
Sbjct: 621 YVEVFRNEFVSQPWDFFADATVEINSHVTGAGINGTITEFPLTAARYKRNSCLTRKDVPP 680
Query: 353 YEI 361
Y I
Sbjct: 681 YMI 683
>At5g58050.1 68418.m07265 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 753
Score = 30.3 bits (65), Expect = 0.89
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 191 VKVFRILYFAKDYDYF----IKTACWLRER-INGGMFVYALTAAVFHRSDCVGITLPAPY 355
V V R Y A +DYF I+ A ++ R ++G + + TA + RS C + PY
Sbjct: 608 VSVLRNEYIAIAFDYFSDPTIELATFIAGRGVDGVITEFPATATRYLRSPCSDLNKDQPY 667
Query: 356 EIYP 367
I P
Sbjct: 668 AILP 671
>At5g20940.1 68418.m02488 glycosyl hydrolase family 3 protein
beta-glucosidase, common nasturtium, PIR:T10521
Length = 626
Score = 30.3 bits (65), Expect = 0.89
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 328 AVRPVEDCSSESIYEHAPVNAFP*PASSFDEVVIVLGEVQYAENF 194
AV+ D ++ IY P F A FD ++ +GE YAE F
Sbjct: 476 AVKKTVDPKTQVIYNQNPDTNFV-KAGDFDYAIVAVGEKPYAEGF 519
>At4g26690.1 68417.m03846 glycerophosphoryl diester
phosphodiesterase family protein weak similarity to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 759
Score = 29.5 bits (63), Expect = 1.6
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 18/118 (15%)
Frame = +2
Query: 56 YMLEENTDKYSKSDV--VTKFMETF---KMGMLPRGEVFVHTNA-----LQMEQA---VK 196
Y +EEN S + + KF + K+ + P + F+ T LQ Q V+
Sbjct: 557 YKVEENIRDILDSAIEDIKKFADAVVIQKLSVFPVAQSFITTQTNVVEKLQKSQLPVYVE 616
Query: 197 VFRILYFAKDYDYFIKTACWLRERI-----NGGMFVYALTAAVFHRSDCVGITLPAPY 355
+F+ + ++ YD+F + I NG + + TAA + R+ C+G PY
Sbjct: 617 LFQNEFLSQPYDFFADATVEINSYITGAGINGTITEFPFTAARYKRNLCLGRKETIPY 674
>At5g27290.1 68418.m03258 expressed protein predicted proteins,
Arabidopsis thaliana
Length = 341
Score = 28.3 bits (60), Expect = 3.6
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 110 FMETFKMGMLPRGEVFVHTNALQMEQAVKVFRILYFAKDYDYFIKTACWLRERINGGMFV 289
F+ + +G+LPRG ALQ E ++ + F DY++ E +N G
Sbjct: 191 FLVAYLVGILPRGYTLSSLEALQKEGSLNIQAGSAFV-DYEFL--------EEVNSG--- 238
Query: 290 YALTAAVFHRSDCVGIT-LPAPYEIYPY 370
++A + +R C+ + + Y +Y Y
Sbjct: 239 -KVSATMLNRFSCIALAGVATEYLLYGY 265
>At2g27110.2 68415.m03258 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282
Length = 851
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 149 EVFVHT-NALQMEQAVKVFRILYFAKDYDYFIKTACWLRERIN 274
E F HT N ++ + FR+ F D +I T C+ R N
Sbjct: 495 ETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRAN 537
>At2g27110.1 68415.m03257 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282
Length = 851
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 149 EVFVHT-NALQMEQAVKVFRILYFAKDYDYFIKTACWLRERIN 274
E F HT N ++ + FR+ F D +I T C+ R N
Sbjct: 495 ETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRAN 537
>At1g43780.1 68414.m05043 serine carboxypeptidase S10 family protein
similar to serine carboxylase II-3 GB:CAA55478 GI:474392
from [Hordeum vulgare]
Length = 479
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 320 SDCVGITLPAPYEIYPYFFVDSHVINKAFMMKMTKAAT-DPVLMNYYGI 463
SD +G+T+ + Y F DSH I+K + +A T +NYY I
Sbjct: 242 SDELGLTIMNQCDFEDYTFTDSHNISKLCEAAVNQAGTIITQYVNYYDI 290
>At5g66520.1 68418.m08387 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 620
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 95 DVVTKFMETFKMGMLPRGEVFVHT-NALQMEQAVKVFRILYFAKDYDYFIK 244
+ ++KFME KMG+ P F A V+ ++++++ + DY +K
Sbjct: 331 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLK 381
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/52 (23%), Positives = 22/52 (42%)
Frame = +3
Query: 18 QLCTRTSRKSRGNICWRKTRTSTRNPMLLRNSWRPSKWACYRVVRSSFTQMR 173
Q+C+ R + G CW K R + P+ L P Y + + +++
Sbjct: 783 QVCSDLERDANGKACWSKKRKFDKIPLGLNTLVAPEDVCSYESMLAGLFRLK 834
>At1g66970.1 68414.m07615 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family
Length = 763
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 176 QMEQAVKVFRILYFAKDYDYFIKTACWLRERI-----NGGMFVYALTAAVFHRSDCVGIT 340
Q+ V++FR + ++ YD+F + I NG + + TAA + R+ C+G
Sbjct: 617 QLPVYVELFRNEFVSQAYDFFSDATVEINAYIYGAGINGTITEFPFTAARYKRNRCLGRE 676
Query: 341 LPAPY 355
PY
Sbjct: 677 EVPPY 681
>At3g17180.1 68416.m02191 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase II SP:P08819
[Triticum aestivum] (Carlsberg Res. Commun.
52:297-311(1987))
Length = 478
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 449 NYYGIKVTDKSMVVIDWRKGVRRSLSEDGQYSYF 550
+Y G V DKS V DW K VR D YS +
Sbjct: 301 SYLGFGVNDKSPAVKDWFKRVRWFEGYDPCYSNY 334
>At1g03190.2 68414.m00297 DNA repair protein / transcription factor
protein (UVH6) identical to DNA repair/transcription
factor protein (UVH6) gi:22651569 gb:AY090788
Length = 758
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 308 VFHRSDCVGITLP--APYEIYPYFFVDSHVINKAFMMKMTKAATDPVLM 448
VF R V IT +P ++YP + V++++F M MT+ P+++
Sbjct: 447 VFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCICPMVL 495
>At1g03190.1 68414.m00296 DNA repair protein / transcription factor
protein (UVH6) identical to DNA repair/transcription
factor protein (UVH6) gi:22651569 gb:AY090788
Length = 758
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 308 VFHRSDCVGITLP--APYEIYPYFFVDSHVINKAFMMKMTKAATDPVLM 448
VF R V IT +P ++YP + V++++F M MT+ P+++
Sbjct: 447 VFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCICPMVL 495
>At3g47000.1 68416.m05104 glycosyl hydrolase family 3 protein
beta-D-glucan exohydrolase, Nicotiana tabacum,
TREMBL:AB017502_1
Length = 608
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 331 DAVRPVEDCSSESIYEHAPVNAFP*PASSFDEVVIVLGEVQYAE 200
DA++ +E IYE P + F ++ +GE YAE
Sbjct: 453 DAIKEAVGDETEVIYEKTPSKETLASSEGFSYAIVAVGEPPYAE 496
>At1g79340.1 68414.m09246 latex-abundant protein, putative (AMC7) /
caspase family protein similar to latex-abundant protein
[Hevea brasiliensis] gb:AAD13216; contains Pfam domain,
PF00656: ICE-like protease (caspase) p20 domain
Length = 418
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 34 HQGSREGIYAGGKHGQV 84
H GS+E +YAGG G V
Sbjct: 316 HVGSKEEVYAGGSRGSV 332
>At1g77800.1 68414.m09059 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1423
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +2
Query: 8 VLQPTVYEDIKEVAREYMLEENTDKYSKSDVVTKFMETFKMGMLPRGEVFVHTNALQMEQ 187
++ P+V ED ++ +++ + ++K V+T +FK LP+G +V + LQ ++
Sbjct: 1338 IVSPSVSEDGDNGSKPK--KQHVETFAKELVMTSDEASFKNRRLPKGYFYVPVDCLQEDK 1395
>At1g19570.1 68414.m02437 dehydroascorbate reductase, putative
similar to GB:BAA90672 from (Oryza sativa)
Length = 213
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 150 SPRGSMPILKVSMNFVTTSD 91
SP+G +P+LK+ +VT SD
Sbjct: 55 SPQGKVPVLKIDDKWVTDSD 74
>At1g19550.1 68414.m02435 dehydroascorbate reductase, putative
similar to dehydroascorbate reductase [Arabidopsis
thaliana] gi|10952514|gb|AAG24946
Length = 153
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 150 SPRGSMPILKVSMNFVTTSD 91
SP+G +P+LK+ +VT SD
Sbjct: 19 SPQGKVPVLKIDDKWVTDSD 38
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,094,356
Number of Sequences: 28952
Number of extensions: 252521
Number of successful extensions: 733
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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