Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J11
         (501 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5U129 Cluster: LP13185p; n=5; Diptera|Rep: LP13185p - ...    52   6e-06
UniRef50_UPI00015B63C5 Cluster: PREDICTED: similar to conserved ...    41   0.018
UniRef50_Q6MSU3 Cluster: Conserved hypothetical transmembrane pr...    35   1.2  
UniRef50_A0CJ81 Cluster: Chromosome undetermined scaffold_196, w...    35   1.2  
UniRef50_Q26HJ8 Cluster: ATPase involved in DNA repair; n=1; Fla...    32   8.3  
UniRef50_Q241W2 Cluster: Putative uncharacterized protein; n=5; ...    32   8.3  
UniRef50_A2DQM4 Cluster: Putative uncharacterized protein; n=1; ...    32   8.3  

>UniRef50_Q5U129 Cluster: LP13185p; n=5; Diptera|Rep: LP13185p -
           Drosophila melanogaster (Fruit fly)
          Length = 323

 Score = 52.4 bits (120), Expect = 6e-06
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +2

Query: 326 YVDTEYSLWLTWFLTPVIVTFLLPAVXXXXXXXXXXXFHLFRLYRLRVADGVQSD---WR 496
           Y+D +YSLWL  FLTP+IVTFLLP V             +++L+R  +   VQ D   WR
Sbjct: 18  YIDLDYSLWLYRFLTPLIVTFLLPLVFVALIYISFLVLFIYKLHRQVIMRAVQGDRNFWR 77

Query: 497 L 499
           +
Sbjct: 78  V 78


>UniRef50_UPI00015B63C5 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 327

 Score = 40.7 bits (91), Expect = 0.018
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +2

Query: 320 LEYVDTEYSLWLTWFLTPVIVTFLLPAVXXXXXXXXXXXFHLFRLYRLRVADGVQSDWR 496
           ++Y+D   +LWL   L P+++TFLLP V            +++RL+R  +     +DWR
Sbjct: 17  VDYIDFNVTLWL---LMPLLITFLLPLVIVLLLYVTALILYVYRLHRYALLLAYGTDWR 72


>UniRef50_Q6MSU3 Cluster: Conserved hypothetical transmembrane
           protein; n=1; Mycoplasma mycoides subsp. mycoides
           SC|Rep: Conserved hypothetical transmembrane protein -
           Mycoplasma mycoides subsp. mycoides SC
          Length = 872

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +2

Query: 158 NDINSRAMVKTECSVRPVKAYIMSDLLKRFDYETTNDFVQIAI 286
           N  NSRA +    SV P K  +++  L +FD++T N+FV I +
Sbjct: 627 NSHNSRATMDMFNSVWPSKPQLVAKSLSQFDFDTINNFVNIFV 669


>UniRef50_A0CJ81 Cluster: Chromosome undetermined scaffold_196,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_196,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 218

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 143 IYFNNNDINSRAMVKTECSVRPVKAYIMSDLLKRFDYETTNDFVQIAISIAGF 301
           +Y N N I    M   E  ++P K Y   DL+K + Y   N  ++ + SI  +
Sbjct: 40  MYSNGNPILISVMTLNEMLIKPTKNYNQEDLIKTYTYAARNTHIKRSSSILSY 92


>UniRef50_Q26HJ8 Cluster: ATPase involved in DNA repair; n=1;
           Flavobacteria bacterium BBFL7|Rep: ATPase involved in
           DNA repair - Flavobacteria bacterium BBFL7
          Length = 1654

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
 Frame = +2

Query: 212 KAYIMSDLLKRFDYETTNDFVQIAI---SIAGFYVGLFYLEYVDTEY 343
           KA  +   +K   +++ NDFV++     S+ G  +GL+ + YVDT++
Sbjct: 524 KADALFSKIKSTSFKSINDFVELLTQLRSLRGEAIGLYEIRYVDTDF 570


>UniRef50_Q241W2 Cluster: Putative uncharacterized protein; n=5;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 759

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +2

Query: 149 FNNNDINSRAMVKTECSVRPVKAYIMSDLLKRFDYETTNDFVQIAISIAGFYVGLFYLEY 328
           F  N++  +  +  +   +  K +I +      DY TT D  Q+A  +A F   L Y++ 
Sbjct: 523 FGKNNLEVQQYISNQYKSQGKKLFISA--FGDTDYPTTKDPTQVATDLANFANSLPYIDG 580

Query: 329 VDTEY 343
           +D +Y
Sbjct: 581 IDIDY 585


>UniRef50_A2DQM4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 2034

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +2

Query: 128 FVTFIIYFNNNDINSRAMVKTECSVRPVKAYIMSDLLKRFDYETTNDFVQIAISIAGFYV 307
           F  F+ Y   +D +   ++   C +  V A+I+  L K+F     ++FV  +        
Sbjct: 110 FTQFLFYIEKSDYSKPFVLPFICGILSVAAHILDKLDKKF---FPHNFV--SDHAFQLLF 164

Query: 308 GLFYLEYV-DTEYSLWLTWFLTPVIVTFLLP 397
            LF LE V DTE ++    F  P I  F LP
Sbjct: 165 KLFQLEIVSDTEKTIATADFSEPNIFAFCLP 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,284,252
Number of Sequences: 1657284
Number of extensions: 8159536
Number of successful extensions: 17628
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17623
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)