Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J10
         (283 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...    87   1e-17
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.     87   1e-17
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...    87   1e-17
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...    87   1e-17
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...    87   1e-17
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...    87   1e-17
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...    87   1e-17
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.       71   5e-13
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...    63   1e-10
BC007355-1|AAH07355.1|  287|Homo sapiens solute carrier family 2...    28   6.3  
AK075249-1|BAC11497.1|  287|Homo sapiens protein ( Homo sapiens ...    28   6.3  
AJ131613-1|CAB59892.1|  287|Homo sapiens dicarboxylate carrier p...    28   6.3  
AJ131612-1|CAB60007.1|  287|Homo sapiens dicarboxylate carrier p...    28   6.3  

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 110
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEG SF
Sbjct: 60  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGISF 95


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +3

Query: 3   TTVFSHAQRVVVCAGCSTILCQPTGGRARLT 95
           TTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 39  TTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 69


>BC007355-1|AAH07355.1|  287|Homo sapiens solute carrier family 25
           (mitochondrial carrier; dicarboxylate transporter), me
           protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 9   VFSHAQRVVVCAGCSTILCQP 71
           +F+H     +  GC+T LCQP
Sbjct: 199 IFTHFVASFIAGGCATFLCQP 219


>AK075249-1|BAC11497.1|  287|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90768 fis, clone THYRO1000795, highly similar to
           Mitochondrial dicarboxylate carrier. ).
          Length = 287

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 9   VFSHAQRVVVCAGCSTILCQP 71
           +F+H     +  GC+T LCQP
Sbjct: 199 IFTHFVASFIAGGCATFLCQP 219


>AJ131613-1|CAB59892.1|  287|Homo sapiens dicarboxylate carrier
           protein protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 9   VFSHAQRVVVCAGCSTILCQP 71
           +F+H     +  GC+T LCQP
Sbjct: 199 IFTHFVASFIAGGCATFLCQP 219


>AJ131612-1|CAB60007.1|  287|Homo sapiens dicarboxylate carrier
           protein protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 9   VFSHAQRVVVCAGCSTILCQP 71
           +F+H     +  GC+T LCQP
Sbjct: 199 IFTHFVASFIAGGCATFLCQP 219


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,284,800
Number of Sequences: 237096
Number of extensions: 615165
Number of successful extensions: 1892
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1892
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)