Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J04
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical p... 123 1e-28
U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical p... 123 1e-28
U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical p... 123 1e-28
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 32 0.43
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 32 0.43
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 32 0.43
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 31 1.00
>U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical
protein C23G10.2c protein.
Length = 137
Score = 123 bits (297), Expect = 1e-28
Identities = 58/131 (44%), Positives = 85/131 (64%)
Frame = +2
Query: 38 AHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVGAQTRQVLEN 217
A +V + I++S + +GPYSQA+ + T+Y+SG LG+D + GV QT Q L+N
Sbjct: 2 AQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKN 61
Query: 218 LKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARATYQVTKLPLNAAV 397
L V++A G +V+KTT+LL N+ DF VN++Y +YF PARA YQV LP V
Sbjct: 62 LGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLV 121
Query: 398 EIEAIALSGDL 430
EIEA+A++G++
Sbjct: 122 EIEAVAIAGEI 132
>U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical
protein C23G10.2a protein.
Length = 171
Score = 123 bits (297), Expect = 1e-28
Identities = 58/131 (44%), Positives = 85/131 (64%)
Frame = +2
Query: 38 AHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVGAQTRQVLEN 217
A +V + I++S + +GPYSQA+ + T+Y+SG LG+D + GV QT Q L+N
Sbjct: 36 AQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKN 95
Query: 218 LKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARATYQVTKLPLNAAV 397
L V++A G +V+KTT+LL N+ DF VN++Y +YF PARA YQV LP V
Sbjct: 96 LGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLV 155
Query: 398 EIEAIALSGDL 430
EIEA+A++G++
Sbjct: 156 EIEAVAIAGEI 166
>U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical
protein C23G10.2b protein.
Length = 144
Score = 123 bits (297), Expect = 1e-28
Identities = 58/131 (44%), Positives = 85/131 (64%)
Frame = +2
Query: 38 AHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVGAQTRQVLEN 217
A +V + I++S + +GPYSQA+ + T+Y+SG LG+D + GV QT Q L+N
Sbjct: 9 AQKVTRQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKN 68
Query: 218 LKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARATYQVTKLPLNAAV 397
L V++A G +V+KTT+LL N+ DF VN++Y +YF PARA YQV LP V
Sbjct: 69 LGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLV 128
Query: 398 EIEAIALSGDL 430
EIEA+A++G++
Sbjct: 129 EIEAVAIAGEI 139
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 7003 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 7049
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 9540 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 9586
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 7237 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 7287
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 9774 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 9824
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST N ++T + KP+GP Q + +D + YI V+G D A
Sbjct: 4334 ATDSTGNFVTENGDVITKDEEGKPLGPNGQILPTDASGNYIYPVIGPDGQA 4384
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
STDST N I+ D KP+GP Q + +D + Y+ V+G D
Sbjct: 5985 STDSTGNFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPD 6032
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDS+ N I+ D KP+GP QA+ +D + YI V+G D A
Sbjct: 5344 ATDSSGNFVTSSGDIIDIDDEGKPLGPDGQALPTDDSGNYIYPVIGPDGQA 5394
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
TDS+ + TI+ + D KP+GP Q + +D + YI V+G D A
Sbjct: 10692 TDSSGSFVTDDGTIIENDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10741
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + IV D KP+GP Q + +D + YI V+G D A
Sbjct: 11053 ATDSTGSFIASNGLIVEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 11103
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 7721 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 7771
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 8495 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 8545
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 10258 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10308
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT 127
+TDST + T++ D KPVGP Q + +D++
Sbjct: 5707 ATDSTGSFVTEDGTVIEKDDEGKPVGPDGQVLPTDES 5743
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
+TDST TIV + KP+GP Q + +D + YI V+G D
Sbjct: 10908 ATDSTGVFVTGDGTIVERNEEGKPIGPDGQVLTTDNSGNYIYPVIGPD 10955
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 7048 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 7094
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 9585 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 9631
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 7282 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 7332
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 9819 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 9869
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST N ++T + KP+GP Q + +D + YI V+G D A
Sbjct: 4379 ATDSTGNFVTENGDVITKDEEGKPLGPNGQILPTDASGNYIYPVIGPDGQA 4429
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
STDST N I+ D KP+GP Q + +D + Y+ V+G D
Sbjct: 6030 STDSTGNFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPD 6077
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDS+ N I+ D KP+GP QA+ +D + YI V+G D A
Sbjct: 5389 ATDSSGNFVTSSGDIIDIDDEGKPLGPDGQALPTDDSGNYIYPVIGPDGQA 5439
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
TDS+ + TI+ + D KP+GP Q + +D + YI V+G D A
Sbjct: 10737 TDSSGSFVTDDGTIIENDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10786
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + IV D KP+GP Q + +D + YI V+G D A
Sbjct: 11098 ATDSTGSFIASNGLIVEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 11148
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 7766 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 7816
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 8540 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 8590
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 10303 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10353
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT 127
+TDST + T++ D KPVGP Q + +D++
Sbjct: 5752 ATDSTGSFVTEDGTVIEKDDEGKPVGPDGQVLPTDES 5788
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
+TDST TIV + KP+GP Q + +D + YI V+G D
Sbjct: 10953 ATDSTGVFVTGDGTIVERNEEGKPIGPDGQVLTTDNSGNYIYPVIGPD 11000
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 7048 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 7094
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
TDST N + I+ D KP+GP Q + +D + YI V+G D
Sbjct: 9585 TDSTGNYITSIGDIIERDDEGKPIGPDGQVLTTDASGNYIYPVVGPD 9631
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 7282 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 7332
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
STDST I+ D KP+GP Q + +D + YI V+G+D A
Sbjct: 9819 STDSTGEFVTEDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGLDGQA 9869
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST N ++T + KP+GP Q + +D + YI V+G D A
Sbjct: 4379 ATDSTGNFVTENGDVITKDEEGKPLGPNGQILPTDASGNYIYPVIGPDGQA 4429
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
STDST N I+ D KP+GP Q + +D + Y+ V+G D
Sbjct: 6030 STDSTGNFITENGEIIERDDEGKPIGPDGQILPTDASGNYVYPVIGPD 6077
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDS+ N I+ D KP+GP QA+ +D + YI V+G D A
Sbjct: 5389 ATDSSGNFVTSSGDIIDIDDEGKPLGPDGQALPTDDSGNYIYPVIGPDGQA 5439
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 20 TDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
TDS+ + TI+ + D KP+GP Q + +D + YI V+G D A
Sbjct: 10737 TDSSGSFVTDDGTIIENDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10786
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + IV D KP+GP Q + +D + YI V+G D A
Sbjct: 11098 ATDSTGSFIASNGLIVEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 11148
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 7766 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 7816
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 8540 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 8590
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMDRDA 166
+TDST + I+ D KP+GP Q + +D + YI V+G D A
Sbjct: 10303 ATDSTGSFVADDGQIIEKDDEGKPIGPDGQVLPTDASGNYIYPVIGPDGQA 10353
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT 127
+TDST + T++ D KPVGP Q + +D++
Sbjct: 5752 ATDSTGSFVTEDGTVIEKDDEGKPVGPDGQVLPTDES 5788
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 STDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKT-LYISGVLGMD 157
+TDST TIV + KP+GP Q + +D + YI V+G D
Sbjct: 10953 ATDSTGVFVTGDGTIVERNEEGKPIGPDGQVLTTDNSGNYIYPVIGPD 11000
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 30.7 bits (66), Expect = 1.00
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 87 RLDPTVKPFYLTRLSIYREYSAW 155
R D VK F+L LS+ REY AW
Sbjct: 247 RTDSDVKKFHLLHLSLLREYLAW 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,585,150
Number of Sequences: 27780
Number of extensions: 339100
Number of successful extensions: 994
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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