Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J03
         (613 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0Q1S5 Cluster: Probable calcium-transporting ATPase; n...    35   1.3  
UniRef50_Q057W5 Cluster: NADH dehydrogenase I chain L; n=1; Buch...    33   4.0  
UniRef50_Q4YIF3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  

>UniRef50_A0Q1S5 Cluster: Probable calcium-transporting ATPase; n=1;
           Clostridium novyi NT|Rep: Probable calcium-transporting
           ATPase - Clostridium novyi (strain NT)
          Length = 865

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = -3

Query: 452 NYKYILINKLLKCLFVMSIFFFLIDMNVYTIGSVQVLRN 336
           NYK +L NK+   L +++I  +LI + V+T  ++ VLRN
Sbjct: 797 NYKKVLKNKVSMTLLLVNIIAYLIFVQVFTGNAIDVLRN 835


>UniRef50_Q057W5 Cluster: NADH dehydrogenase I chain L; n=1;
           Buchnera aphidicola str. Cc (Cinara cedri)|Rep: NADH
           dehydrogenase I chain L - Buchnera aphidicola subsp.
           Cinara cedri
          Length = 621

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 20/73 (27%), Positives = 35/73 (47%)
 Frame = +1

Query: 355 LPIVYTFISIKKKKIDITNRHFNNLFISIYL*LRSLTYVLIMNKLYQYVHSYCSERQ*M* 534
           L ++Y++    KK     N  F ++F  IY+ + +  Y  I    Y ++ SYC+  Q + 
Sbjct: 507 LGLIYSYFMYYKKDFSSKNNFFKSIFYPIYILINNSWYFDIF-YFYIFIQSYCNISQYI- 564

Query: 535 KPDNPEIYIKKFF 573
             +    YI+ FF
Sbjct: 565 -NNKNFFYIENFF 576


>UniRef50_Q4YIF3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 118

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 12/29 (41%), Positives = 22/29 (75%)
 Frame = -3

Query: 482 FIIKTYVRLRNYKYILINKLLKCLFVMSI 396
           ++ K+   L+NYKY+ + ++L C+FV+SI
Sbjct: 62  YLKKSIFFLQNYKYLHLKRILNCIFVVSI 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,805,423
Number of Sequences: 1657284
Number of extensions: 10340140
Number of successful extensions: 19534
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19517
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)