Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J03
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   4.4  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    23   5.9  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    23   5.9  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    23   5.9  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    23   5.9  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   7.8  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 70  RWCFKCWRSEVYNKTSCVP 126
           R C++CW+++  ++  C P
Sbjct: 429 RRCYRCWQTDHISQDCCGP 447


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 17  INL*IGVTNAMTTVCQV*DGVLNAGAQRYIIKLAVFPQL 133
           +N  + +T +  T C    G LNA  ++  + +  FP+L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 17  INL*IGVTNAMTTVCQV*DGVLNAGAQRYIIKLAVFPQL 133
           +N  + +T +  T C    G LNA  ++  + +  FP+L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 17  INL*IGVTNAMTTVCQV*DGVLNAGAQRYIIKLAVFPQL 133
           +N  + +T +  T C    G LNA  ++  + +  FP+L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 17  INL*IGVTNAMTTVCQV*DGVLNAGAQRYIIKLAVFPQL 133
           +N  + +T +  T C    G LNA  ++  + +  FP+L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +1

Query: 358 PIVYTFISIKKKKIDITNRHFNNLFISIYL*LRSLTYVLIMNKL 489
           P++Y F   +  +ID TN H    ++ +     SL+ VL++ K+
Sbjct: 293 PMMYQFNRFRYGEIDFTNGH-GMRWVELPYESSSLSMVLMLPKM 335


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,445
Number of Sequences: 2352
Number of extensions: 11762
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)