Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J01
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 72 7e-14
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 62 5e-11
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 62 7e-11
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 55 1e-08
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 46 6e-06
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 45 9e-06
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 39 6e-04
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 39 7e-04
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 38 0.001
SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase Alg11|Schiz... 27 3.2
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 26 5.6
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 25 7.4
SPBC11B10.06 |sws1||SWIM domain containing-Srs2 interacting prot... 25 9.8
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 72.1 bits (169), Expect = 7e-14
Identities = 43/111 (38%), Positives = 61/111 (54%)
Frame = +1
Query: 295 KVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTH 474
KVI++LG D L+NNA +A PF + S ++D + ++ + V M +
Sbjct: 66 KVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKG 125
Query: 475 GAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
G+IVNI S L A YSA+KA L+ LT+A+A+ GP GIRVN P
Sbjct: 126 GSIVNIGSVNGHIYLGSPA-YSAAKAGLENLTKALAVRYGPLGIRVNVCAP 175
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 62.5 bits (145), Expect = 5e-11
Identities = 31/103 (30%), Positives = 55/103 (53%)
Frame = +1
Query: 313 GHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNI 492
G L+NNA P ++ + K D+N V+ +++ +++ K G IVN+
Sbjct: 76 GSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAFQHQLIRAK--GTIVNV 133
Query: 493 SSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAV 621
+S S +A Y+ASKAAL A + + +EL P+G++V ++
Sbjct: 134 NSLVSYVPFAFNAAYNASKAALLAYSNTLRIELAPFGVQVTSI 176
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 62.1 bits (144), Expect = 7e-11
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Frame = +1
Query: 274 ADWDKTRKVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARK 453
+D + + ES+ D +V+ A V + S D N+ + + +S++ +
Sbjct: 62 SDMKNLKSIFESV-EIDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAILE 120
Query: 454 MVENKTHGA---IVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVN 624
NK I+NISS+ S AL ++Y+ASKA L++ T+ +A E+ GIRVNA++
Sbjct: 121 WFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAIS 180
Query: 625 P 627
P
Sbjct: 181 P 181
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 54.8 bits (126), Expect = 1e-08
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +1
Query: 301 IESLGHFDALVNNAAVA-VCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHG 477
++ LG D LVNN A V + + +D TF N+ + +++ M K+
Sbjct: 116 LKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHM---KSGS 172
Query: 478 AIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
+IVN SS + D Y+++K A+ A TR ++ + +GIRVNAV P
Sbjct: 173 SIVNCSSINAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAP 222
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 45.6 bits (103), Expect = 6e-06
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Frame = +1
Query: 181 GANIVALSR-----TRSHLESLQSEYPSXXXXXXXXADWDKTRKVIESLGHFDALVNNAA 345
G N++A SR T H + L+ + A D R+ G+ D ++NNA
Sbjct: 29 GYNVIACSRAPDTITIEHSKLLKLKLDVTDVKSVETAFKDAKRR----FGNVDIVINNAG 84
Query: 346 VAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQASKAALKD 525
+ F + + ++N V I++ M E+ G I+ ISS A
Sbjct: 85 YGLVGEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPC 144
Query: 526 HAIYSASKAALDALTRAMALELGP-YGIRVNAVNP 627
++Y+ASK A++ L++ + EL P + I + V P
Sbjct: 145 LSMYNASKFAVEGLSQTIMRELDPNWNIAITIVQP 179
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 45.2 bits (102), Expect = 9e-06
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Frame = +1
Query: 109 GKRILVTXXXXXXXXXXXXELWR-AGANIVALSRTRSHLES----LQSEYP-SXXXXXXX 270
GK IL+T E+ + A ++ +R S +E L+S+Y S
Sbjct: 6 GKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLD 65
Query: 271 XADWDKTRKVIESL----GHFDALVNNAAVAV-CEPFLECSPSNFDKTFDINVKAVLNIS 435
+D VIESL D L+NNA +A+ + ++ + + NV ++ ++
Sbjct: 66 VSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMT 125
Query: 436 QIVARKMVENKTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVN 615
+ V + +K G I+N+ S A + + ++Y ++K+AL T A+ E IR+
Sbjct: 126 RAVL-PIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSALRKETIDTRIRIM 184
Query: 616 AVNP 627
V+P
Sbjct: 185 EVDP 188
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 39.1 bits (87), Expect = 6e-04
Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 21/218 (9%)
Frame = +1
Query: 40 FTCHKNFRYN-LIVKHSKMEI--SFKGKRILVTXXXXXXXXXXXXELWRAGANIVALSRT 210
FT +F Y K K+ + + KG +VT +L +G N+V +SRT
Sbjct: 31 FTSFASFVYKTFFAKGVKLSVYGAKKGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRT 90
Query: 211 RSHLESLQSEYPSXXXXXXXXADWDKTRKVIESLG--HFD-------ALVNNAAVAVCEP 363
+ L++L E + D T+ E+ H D L+NN + P
Sbjct: 91 QEKLDALAKELETVAKVKTRTIAIDYTKTTAETFEKLHQDLVGTPITVLINNVGQSHYMP 150
Query: 364 --FLECSPSNFDKTFDIN-------VKAVLNISQIVARKMVENKTHGAIVNISSQASKAA 516
F E + D IN KAVL+I + R+ E I+ + S A
Sbjct: 151 TSFAETTVKEMDDIMHINCFGTLHTTKAVLSI-MLRERQKNEKGPRCLILTMGSFAGLLP 209
Query: 517 LKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNPY 630
+ Y+ SKA L + ++ E+ GI V N Y
Sbjct: 210 SPYLSTYAGSKAFLSNWSASLGEEVKKQGIDVWCFNSY 247
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 38.7 bits (86), Expect = 7e-04
Identities = 51/206 (24%), Positives = 79/206 (38%), Gaps = 11/206 (5%)
Frame = +1
Query: 43 TCHKNFRYNLIVKHSKMEISFKGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHL 222
T NF Y L HS ILVT EL GAN+ ++RT + L
Sbjct: 9 TLQSNFGYFLTSCHS---------HILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKL 59
Query: 223 ESLQSEYPSX--------XXXXXXXADWDKTRKVIESLGHF-DALVNNAAVAVCEPFLEC 375
+ +E ++ +IE L D +V+ A + F E
Sbjct: 60 QEAVAELSDSKIHEDQQVSFESVDLTSYESVHSMIERLPFCPDHVVHCAGSCIPGFFTEL 119
Query: 376 SPSNFDKTFDINVKAVLNISQIVARKMVE-NKTHG-AIVNISSQASKAALKDHAIYSASK 549
PS F+K N A + + R+M E + ++ I+ + S S + ++ YS K
Sbjct: 120 DPSVFEKQMRQNYLASVYVCHAAIRRMKEISPSYSRRILLVGSLLSSLPIIGYSAYSPVK 179
Query: 550 AALDALTRAMALELGPYGIRVNAVNP 627
AA+ L ++ E Y I V+ P
Sbjct: 180 AAVRNLADSLRQECILYDIEVSVYLP 205
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 38.3 bits (85), Expect = 0.001
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +1
Query: 325 ALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQA 504
AL+N AA+A L S K F+ NV L I+ + ++++ + +VNI+S
Sbjct: 109 ALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAITSALFPLLLQDP-NPHVVNIASSL 167
Query: 505 SKAALKDHAIYSASKAALDALTRAMALEL 591
+ + YS+SKAAL +L + E+
Sbjct: 168 AYFSAMGVGAYSSSKAALVSLHETLEEEV 196
>SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase
Alg11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 471
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 356 VNLSSNAHHPTLTKHLISMLKQCSILVK*LPGKW 457
+ + + H+PT++ ++ LKQ S+L K W
Sbjct: 183 IPVGAYVHYPTISTDMLKSLKQVSLLAKVKMAYW 216
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 304 ESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDIN 411
E+ A VN+A+ V EPF+ NFD + +N
Sbjct: 259 ETAEEIQAKVNDASADVHEPFVYNHFRNFDASMHVN 294
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 287 KLVKSSNLSDILMPW*TMLLLLYVNLSSNAHHPTLT 394
K +K+ +L+ LMPW + L N+ + H TL+
Sbjct: 1112 KNIKTPSLTIYLMPWIAANMDLAKNVQTQIEHTTLS 1147
>SPBC11B10.06 |sws1||SWIM domain containing-Srs2 interacting protein
1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +2
Query: 374 AHHPTLTKHLI--SMLKQCSILV 436
+HHPT+ H++ S+L+ C LV
Sbjct: 186 SHHPTICSHILAASILRACHNLV 208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,556,482
Number of Sequences: 5004
Number of extensions: 47904
Number of successful extensions: 128
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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