Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J01
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 88 7e-18
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 79 3e-15
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 62 3e-10
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 62 4e-10
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 62 5e-10
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 60 1e-09
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 58 8e-09
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 58 8e-09
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 56 2e-08
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 55 5e-08
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 54 1e-07
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 52 4e-07
SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 48 5e-06
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 48 5e-06
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 46 4e-05
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 45 6e-05
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 40 0.002
SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06) 37 0.013
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.090
SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_48285| Best HMM Match : Torsin (HMM E-Value=0) 30 1.9
SB_50245| Best HMM Match : RVT_1 (HMM E-Value=1.4e-16) 29 2.6
SB_21856| Best HMM Match : RVT_1 (HMM E-Value=4.5e-32) 29 2.6
SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_1686| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-12) 28 5.9
SB_5824| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 87.8 bits (208), Expect = 7e-18
Identities = 49/111 (44%), Positives = 65/111 (58%)
Frame = +1
Query: 295 KVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTH 474
K+I+ LG D LVNNA PFL+ + + K F ++V SQI AR+MV+
Sbjct: 109 KLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQG 168
Query: 475 GAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
G I+NI+S L D + Y+A+K AL LT+AMALEL + I VNAV P
Sbjct: 169 GRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAP 219
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 79.0 bits (186), Expect = 3e-15
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 PSXXXXXXXXADWDKTRKVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAV 423
PS AD +K +K+IES FD LVNNA A+ E FLE P +FD+ + NV+A
Sbjct: 2 PSIQAVCDDVADIEKMQKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAP 61
Query: 424 LNISQIVARKMVENKTHGAIVNISSQASKAALKDH-AIYSASKAAL 558
L I+Q VA+KMV GAIVN+SS ++ L + ++ S AAL
Sbjct: 62 LFIAQAVAKKMVAKGEGGAIVNVSSVFTELHLPNSISLGKYSNAAL 107
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 75.4 bits (177), Expect = 4e-14
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Frame = +1
Query: 106 KGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSXXXXXXXXADWD 285
K K ++++ R GA ++A L+ L S P D++
Sbjct: 15 KNKVVVLSAAAQGIGKATALACAREGAKVIATDINAEKLKELHS-VPGIETRVVDVTDYE 73
Query: 286 KTRKVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVEN 465
+K + D L N A + + ECS +D T D+NVK++ +++ KM
Sbjct: 74 AIKKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKM-RQ 132
Query: 466 KTHGAIVNISSQASK-AALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNPYCYYD 642
+ G+I+N++S AS + Y SKAA+ T+A+A + GIRVNAV P Y
Sbjct: 133 QGSGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIAADYITKGIRVNAVCPGTIYT 192
Query: 643 RNGQSRM 663
+ Q R+
Sbjct: 193 ESLQYRI 199
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 62.5 bits (145), Expect = 3e-10
Identities = 33/101 (32%), Positives = 58/101 (57%)
Frame = +1
Query: 325 ALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQA 504
A+VNNA + PF + + FD+NV +LN+++ + K+ G IVN++S A
Sbjct: 627 AIVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTKAFLPLL--KKSCGRIVNVASCA 684
Query: 505 SKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
K + YSASK A+ + + A+ +E+ P+G+ V+ ++P
Sbjct: 685 GKLPGPGLSAYSASKYAVQSFSDALRIEMRPFGVSVHIIDP 725
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 62.1 bits (144), Expect = 4e-10
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +1
Query: 298 VIESLGHFDALVNNAA-VAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTH 474
V +S G D ++NNA V P E + FDK D+N+K N+ + KM++
Sbjct: 73 VCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRSFLPKMIK-AGK 131
Query: 475 GAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGP 597
G IVN SS KA A Y A+K ++ LTRA+A+EL P
Sbjct: 132 GVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRALAMELPP 172
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +1
Query: 415 KAVLNISQIVARKMVENK-THGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALEL 591
K + Q A+ MVENK +G+I+NISS +K+ A Y+ASKA ++ LT+ A+EL
Sbjct: 380 KGTFLMCQTTAKAMVENKINNGSIINISSIVAKSGNMGQANYAASKAGVEGLTKVCAIEL 439
Query: 592 GPYGIRVNAVNP 627
+GIR NA+ P
Sbjct: 440 ARFGIRCNAILP 451
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 60.5 bits (140), Expect = 1e-09
Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Frame = +1
Query: 169 LWRAGANIVALSRTRSHLESLQSEYPSXXXXXXXXADWDKTRKVI-----ESLGHFDALV 333
L RAGA V + S ++ E+ S D + K E G +A +
Sbjct: 308 LIRAGARAVIVDLPSSEGQNTAQEFGSHCTFIPGHVDSESEIKAAIKVAKEKYGCVNASI 367
Query: 334 NNAAVAVCEPFLECS----PSN-FDKTFDINVKAVLNISQIVARKMVENKT-----HGAI 483
N AA+ E L S P F++T IN N++++VA M N G I
Sbjct: 368 NTAALNTKELTLSESGCPHPLELFEETMKINAVGTFNVARLVAESMATNTPDQEGERGVI 427
Query: 484 VNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
VN+SS Y+A+K A++A+T MA +L GIRVN ++P
Sbjct: 428 VNVSSIHGTEGQSGKVAYAATKGAINAMTLPMARDLAKLGIRVNTISP 475
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +1
Query: 295 KVIESLGHFDALVNNAAVAV-CEPFLECSPSN-FDKTFDINVKAVLNISQIVARKMVENK 468
+++E G D LVNNA + + C P EC+ ++ +K F+ NV ++ ++ V M + +
Sbjct: 108 EIVEKEGRIDVLVNNAGIGLFCVP--ECATTDAINKVFEPNVYGLMRMTNAVIPHMKKQR 165
Query: 469 THGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
G +VNI S IY ASK A++ AMA LG + I+ + P
Sbjct: 166 A-GHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAMAPVLGKFNIKTTIIEP 217
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 57.6 bits (133), Expect = 8e-09
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 12/189 (6%)
Frame = +1
Query: 100 SFKGKRILVTXXXXXXXXXXXXELWRAGANIV-------ALSRTRSHLESLQSEYPSXXX 258
S +G+ +L+T L + G +V AL ++ L +E
Sbjct: 32 SLRGETVLITGAASGIGRLTALILAKKGCKLVLWDINLEALKAVAQEIQDLGAETHYFEC 91
Query: 259 XXXXXADWDKTRKVIES-LGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKA-VLNI 432
+ +K +E G+ L+NNA V + FL CS S+ +TF +N A + I
Sbjct: 92 DVRKKDEVEKVANAVEDQAGNVTILINNAGVVTGKKFLNCSESDVMRTFQVNSLAHIWTI 151
Query: 433 SQIVARKMVENKTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALE---LGPYG 603
+ + M +N+ H IV+I+S A L Y ASK A L A+ E LG G
Sbjct: 152 QRFIPSMMEKNRGH--IVSIASVAGYFGLVGCVDYCASKFAAVGLIEALRREIHGLGKMG 209
Query: 604 IRVNAVNPY 630
I + P+
Sbjct: 210 IEFTTICPH 218
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 57.6 bits (133), Expect = 8e-09
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +1
Query: 289 TRKVIESLGHFDALVNNAAVAVCEP-FLECSPSNFDKTFDINVKAVLNISQIVARKMVEN 465
+++V+ G L+NN+ V F E F+K DIN+K N+ + M+E
Sbjct: 75 SQQVMLDFGAPSLLINNSGVTNKNANFWEVPTEEFNKVVDINIKGTANVLRHFLPSMIEA 134
Query: 466 KTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
K G IVN +S + + A Y +K AL+ L++A+A EL Y + VNP
Sbjct: 135 KRKGVIVNFTSGWGRCVAPEVAPYCTTKWALEGLSKALAEELPEY-LTCVPVNP 187
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Frame = +1
Query: 304 ESLGHFDALVNNAAVAVCEPFLE-CSPSNFDKTFDINVKAVLNISQIVARKMVENK--TH 474
+ G D LVNNA + + LE + + + F NV + ++M +
Sbjct: 81 QHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCCREAIKRMSTRQGGNG 140
Query: 475 GAIVNISSQASK-AALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
GAIVN+SS A++ A ++ Y+A K A+D++T +A E+ GIRVNAV P
Sbjct: 141 GAIVNLSSAAARLGAPGEYIDYAAVKGAIDSMTLGLAKEVAADGIRVNAVRP 192
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 55.2 bits (127), Expect = 5e-08
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +1
Query: 283 DKTRKVIE----SLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVAR 450
+ RK+IE + G D LVNNA+ ++K +N+ +SQ
Sbjct: 78 ETARKLIEDTVTAFGQLDLLVNNASQFCPTESGSVQEETWNKLMGVNLSFPFFLSQAAFP 137
Query: 451 KMVENKTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
+ ++HG+I+N+ ++ L +H++Y SKA L T+A+A + P +RVN V+P
Sbjct: 138 HL--KRSHGSIINMIDIHAERPLANHSVYCVSKAGLHMCTQALAKDFAP-DVRVNGVSP 193
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/104 (31%), Positives = 55/104 (52%)
Frame = +1
Query: 298 VIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHG 477
+ E G D LVNNA ++ + S +TF+ N VL +S+ V +M + + G
Sbjct: 78 IYEEEGRIDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMSKAVIPRMKSDHS-G 136
Query: 478 AIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIR 609
I+NISS A + +Y ASK A++ L+ ++A L +G++
Sbjct: 137 HIINISSTAGHTGMPFTGLYCASKFAVEGLSESLAPLLRKFGVK 180
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +1
Query: 367 LECSPSNFDKTFDINVKAVLNISQIVARKM---VENKTHGAIVNISSQASKAALKDHAIY 537
L+ ++ KT +NV+ N+ Q M GA+VN++S ++ A H Y
Sbjct: 142 LDVEEKDWHKTMSVNVQGYANMVQACHPYMKTACNTGPSGAVVNLASISAHRAQPVHWTY 201
Query: 538 SASKAALDALTRAMALELGPYGIRVNAVNP 627
S+SK A+ ++T+ MAL+L IRVN+++P
Sbjct: 202 SSSKGAIISMTKCMALDLAKDHIRVNSLSP 231
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Frame = +1
Query: 304 ESLGHFDALVNNAAVAVCEPFLECSPSN-----FDKTFDINVKAVLNISQIVARKMVENK 468
E G +A VN A + + L + F+K +N N+ ++VA +M++N+
Sbjct: 87 EKFGPLNAAVNCAGIGIAVKTLSKTGEAHALDLFEKVLKVNTTGSFNVIRLVAEQMIKNE 146
Query: 469 T-----HGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
G I N +S A+ A YSASK + +T +A +L GIRVN + P
Sbjct: 147 PTEGGERGVITNTASVAAFDGQMGQAAYSASKGGIVGMTLPIARDLARNGIRVNTIAP 204
>SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/100 (31%), Positives = 51/100 (51%)
Frame = +1
Query: 328 LVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQAS 507
+VNNA +A P F DIN+ ++++++ + + G IVN++S A
Sbjct: 20 VVNNAGIAGVGPVDWIPVERFKHVADINLWGLVDVTKTFLPLV--KRARGRIVNVTSIAG 77
Query: 508 KAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
+ L + YS SK +A + A+ EL P+GI V+ V P
Sbjct: 78 RFTLPFASPYSVSKYGAEAFSDAIRRELAPFGISVSIVEP 117
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 48.4 bits (110), Expect = 5e-06
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 20/223 (8%)
Frame = +1
Query: 19 LVWLSRVFTCHKNFRYNLIVKH-SKMEISFKGKRILVTXXXXXXXXXXXXELWRAGANIV 195
++WL +F +F + S + G+ +T EL + G +V
Sbjct: 11 VLWLVGIFLGDCDFSLRFWERFGSSPKAKLYGRVCWITGASSGIGENLAYELAKFGCKLV 70
Query: 196 ALSRTRSHLESLQSEYPSXXXXXXXX--------------ADWDKTRKVIES-LGHF--- 321
+R RS LE ++ + + ++DK +++ S L HF
Sbjct: 71 LSARRRSELERVKEQCIAIAKEANTSYNADQDILVLPMDVTEYDKHTELVRSVLDHFNKI 130
Query: 322 DALVNNAAVAVCEPFLECSPSNFDKTF-DINVKAVLNISQIVARKMVENKTHGAIVNISS 498
D L+NN+ + +E +K D+N AV+++++ V M+E K +G IV SS
Sbjct: 131 DILINNSGRSQRGLAVETPGIEVEKAMLDLNFLAVVSLTKAVLPHMIERK-NGHIVVTSS 189
Query: 499 QASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
A K Y+A+K A+ + +EL P I V V P
Sbjct: 190 VAGKIGAPMSTSYNATKFAVQGYFDGLRVELFPKNIHVTLVCP 232
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/94 (27%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 367 LECSP-SNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQASKAALKDHAIYSA 543
+E +P S + K D+N+ +++++ + ++ K G +VNISS A + ++ + YS
Sbjct: 5 VELTPLSEYKKMADVNLWGLIDVT-LTFLPLIR-KCGGRVVNISSIAGRLSIPNTGPYSV 62
Query: 544 SKAALDALTRAMALELGPYGIRVNAVNPYCYYDR 645
+K ++A + A+ E+ P+G++V V P ++ R
Sbjct: 63 TKYGVEAFSDALRREVSPWGVKVTLVEPGGFHTR 96
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 325 ALVNNAAVAVCEPFLECSP-SNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQ 501
A+ NNA P LE P ++ + D+N+ ++++++ + G +VN+SS
Sbjct: 23 AVYNNAGFMTLAP-LEWFPLDDYKRMADVNLWGLVDVTKTFLPLV--KMARGRVVNVSSI 79
Query: 502 ASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
A + A YS +K ++A + A+ E+ P+G+RV + P
Sbjct: 80 AGIVVVPSMAAYSITKYGVEAFSDALRREMSPWGVRVIIIEP 121
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/120 (24%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +1
Query: 280 WDKTRKVIESLGHFDALVNNAAVAVCEPFLECSP-SNFDKTFDINVKAVLNISQIVARKM 456
+++ ++V+ S A+ NNA P LE P ++ + D+N+ ++++S+ +
Sbjct: 451 FEQVKRVLPSGTGLWAVYNNAGYMTLAP-LEWFPLDDYKRMADVNLWGLVDVSKTFLPLV 509
Query: 457 VENKTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNPYCY 636
G +VN++S A + A YS +K ++A + + E+ P+G+RV+ + P +
Sbjct: 510 --KMARGRVVNVASTVGLIANELTAPYSITKYGVEAFSDVLRREMFPWGVRVSIIEPQAF 567
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 367 LECSP-SNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQASKAALKDHAIYSA 543
LE P ++ + D+N+ ++++++ + G +VN+SS A + A YS
Sbjct: 6 LEWFPLDDYKRMADVNLWGLVDVTKTFLPLV--KMARGRVVNVSSIVGLIANELTAPYSI 63
Query: 544 SKAALDALTRAMALELGPYGIRVNAVNPYCY 636
+K ++A + + E+ P+G+RV+ + P +
Sbjct: 64 TKYGVEAFSDVLRREMLPWGVRVSIIEPQAF 94
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/84 (21%), Positives = 45/84 (53%)
Frame = +1
Query: 385 NFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQASKAALKDHAIYSASKAALDA 564
++ + D+N+ ++++++ + G +VN++S A + A YS +K ++A
Sbjct: 179 DYKRMADVNLWGLVDVTKTFLPLV--KMARGRVVNVASIVGLIAGELTAPYSITKYGVEA 236
Query: 565 LTRAMALELGPYGIRVNAVNPYCY 636
+ + E+ P+G+RV+ + P +
Sbjct: 237 FSDVLRREMLPWGVRVSIIEPQAF 260
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/104 (25%), Positives = 52/104 (50%)
Frame = +1
Query: 325 ALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQA 504
AL NNA C P S++ + D+N+ V+++S+ + G +VNISS
Sbjct: 258 ALANNAGYGACAPIEWYPLSHYKRMADVNLWGVVDVSKTFL--PLVKMARGRVVNISSIY 315
Query: 505 SKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNPYCY 636
+ + Y+ +K ++A + +M E+ +G+RV+ + P +
Sbjct: 316 GFFSPIFGSHYAITKYGVEAFSDSMRREMARWGVRVSLIEPAAF 359
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/109 (27%), Positives = 52/109 (47%)
Frame = +1
Query: 301 IESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGA 480
I++ G D +VNNA + + L S ++D +++K +++ M + K G
Sbjct: 88 IKAFGRIDVVVNNAGILRDKSILRMSELDWDLVQRVHLKGSFLVTRAAWPHMKKQK-FGR 146
Query: 481 IVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
I+ +S + A YSA+K L L+ +A E Y I+ NA+ P
Sbjct: 147 IIMTTSTSGIYGNFGQANYSAAKLGLVGLSNTLAQEGAKYNIKCNAIAP 195
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/100 (27%), Positives = 48/100 (48%)
Frame = +1
Query: 328 LVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQAS 507
LVNNA V + P + + + ++N+ + +++ + K G +VNISS A
Sbjct: 41 LVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREK--GRVVNISSVAG 98
Query: 508 KAALKDHAIYSASKAALDALTRAMALELGPYGIRVNAVNP 627
L+ + Y SK + + A+ E+ P+G+ V V P
Sbjct: 99 MVPLQRSSAYCISKFGVSVFSDALRREMSPWGVGVVLVEP 138
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/87 (31%), Positives = 46/87 (52%)
Frame = +1
Query: 322 DALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQ 501
D LVNNA V + + S + F++N V+ +++ V KM N + G I+NI S
Sbjct: 279 DVLVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLTKAVIPKMKGNPS-GHIINIPSI 337
Query: 502 ASKAALKDHAIYSASKAALDALTRAMA 582
+ +AIY +SK A++ + ++A
Sbjct: 338 GGIRGVPFNAIYCSSKFAVEGMAESLA 364
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 16/127 (12%)
Frame = +1
Query: 298 VIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKA-----VLNISQIV-ARKMV 459
V +G LVNNA + + FL+ KT ++N A LN IV + V
Sbjct: 124 VKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILALNPDYIVFTLQTV 183
Query: 460 EN-------KTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALE---LGPYGIR 609
++ K HG +VNI+S A + Y +SK ++ +E LG G++
Sbjct: 184 KSFLPSMLAKNHGHVVNIASSAGFFGVPGMCDYCSSKFGAVGFDESLRMELSSLGKTGVK 243
Query: 610 VNAVNPY 630
V PY
Sbjct: 244 TTVVCPY 250
>SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06)
Length = 251
Score = 37.1 bits (82), Expect = 0.013
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Frame = +1
Query: 283 DKTRKVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINV-------KAVLNISQI 441
+K +++ G L+NNA + V + + + + F K++L + +
Sbjct: 77 EKATSILQGSG-LSLLINNAGLFVNKGLDDIEAEDMIEVFKTQTVAPLMITKSLLGLLKQ 135
Query: 442 VARKMVEN-KTHGA-IVNISSQASKAALKDHA--IYS--ASKAALDALTRAMALELGPYG 603
AR V + KT A IVNISS+ S + +H+ +Y+ ASK AL+ +T++++++L G
Sbjct: 136 AARSSVPDLKTGKALIVNISSKTSLIS-DNHSGGMYASRASKCALNMVTKSLSVDLKKDG 194
Query: 604 IRVNAVNP 627
I AVNP
Sbjct: 195 ILAVAVNP 202
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 35.9 bits (79), Expect = 0.030
Identities = 25/92 (27%), Positives = 44/92 (47%)
Frame = +1
Query: 325 ALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQA 504
AL NNA P + ++ DIN+ ++++++ + K G +VN SS A
Sbjct: 113 ALDNNAGYMGLGPLEWFTMDDYKMQADINLWGLIDVTKTFLPLIKVAK--GRVVNFSSIA 170
Query: 505 SKAALKDHAIYSASKAALDALTRAMALELGPY 600
A A YS +K +++ + A+ E+ PY
Sbjct: 171 GVATPALRAAYSVTKYGVESFSDALRREMAPY 202
>SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 532 IYSASKAALDALTRAMALELGPYGIRVNAVNPYCY 636
+Y SK A++A + A+ LEL P+G++V V P Y
Sbjct: 44 VYCISKFAVEAFSSALRLELEPWGVKVIVVEPGGY 78
>SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 562 ALTRAMALELGPYGIRVNAVNPYCYYDRNGQSRM 663
A+ + +A+E GP G+RVN V P D G SR+
Sbjct: 2 AMVKHLAVEWGPQGVRVNCVAPGPIEDTEGMSRL 35
>SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +1
Query: 547 KAALDALTRAMALELGPYGIRVNAVN 624
K A+ ++TRA+A++ YG+RVN+++
Sbjct: 63 KGAITSMTRALAIDEAAYGVRVNSLS 88
>SB_48285| Best HMM Match : Torsin (HMM E-Value=0)
Length = 636
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = -1
Query: 486 HYCTMSFVFYHFPGNYLTN---IEHCFNIDIKCFVKVGW*AFEERF---TYSNSSIVHQG 325
H+C M FVF G L N +EH D + K+G EE F + S+ +I +
Sbjct: 504 HFCKMIFVFLSNTGAKLINQHALEHYKLGDER--EKIGLVTLEELFHQISESDPNIWYND 561
Query: 324 IKMSERFDDFTSFVPV 277
+ SE D F F+P+
Sbjct: 562 LLRSEVIDHFVPFLPL 577
>SB_50245| Best HMM Match : RVT_1 (HMM E-Value=1.4e-16)
Length = 311
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 394 KTFDINVKAVLNISQIVARKMVENKTHGAI-VNISSQASKAALKDHAIYSASKAALDALT 570
K + +N L S R +V N+T+ + +NI +Q KAA Y+A K ALD L+
Sbjct: 216 KRWVVNPTPFLRASGGEIRSLVANETYKYLGINIGAQGVKAAE-----YNAFKEALDNLS 270
Query: 571 RA 576
RA
Sbjct: 271 RA 272
>SB_21856| Best HMM Match : RVT_1 (HMM E-Value=4.5e-32)
Length = 583
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 394 KTFDINVKAVLNISQIVARKMVENKTHGAI-VNISSQASKAALKDHAIYSASKAALDALT 570
K + +N L S R +V N+T+ + +NI +Q KAA Y+A K ALD L+
Sbjct: 259 KRWVVNPTPFLRASGGEIRSLVANETYKYLGINIGAQGVKAAE-----YNAFKEALDNLS 313
Query: 571 RA 576
RA
Sbjct: 314 RA 315
>SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 516 CSFRSLG*YVHYCTMSFVFYHFPGNYLTNIEHC 418
C + G Y HYC FY P ++T+I+ C
Sbjct: 354 CRHNTAGRYCHYCREG--FYKDPNKHITHIKVC 384
>SB_1686| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-12)
Length = 362
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 483 YCTMSFVFYHFPG-NYLTNIEHCFNIDIKCFVKV 385
YC + + F G +YL NI C +IDI V V
Sbjct: 160 YCVAAIISLRFIGKSYLRNIIFCLHIDIAIVVSV 193
>SB_5824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 1 VDTYCKLVWLSRVFTCHKNFRYNL 72
+ Y ++W FT HKNF Y L
Sbjct: 60 IPMYMSVIWPGSNFTLHKNFHYYL 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,053,912
Number of Sequences: 59808
Number of extensions: 362299
Number of successful extensions: 758
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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