Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J01
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    44   1e-06
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   3.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.6  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   4.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   4.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   4.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.0  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
 Frame = +1

Query: 298 VIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENK-TH 474
           V ++LG  D L+NNA + +          ++ K FDIN+  +  + Q V + M +    +
Sbjct: 78  VEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQEVLKLMKKKGINN 137

Query: 475 GAIVNISSQASKAAL---KDHAIYSASKAALDALTRAMALELG--PYGIRVNAVNP 627
           G IVNI+  +    L   ++   Y ASK AL  LT  +  EL      I+V +++P
Sbjct: 138 GIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVISISP 193


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 552 CLGCLNSCH 578
           CLGC +SCH
Sbjct: 36  CLGCGDSCH 44


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 596 GPSSKAMARVKASKAALEAL 537
           GPS K +A+  ASKAAL  L
Sbjct: 197 GPSKK-LAKAAASKAALAKL 215


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +1

Query: 532 IYSASKAALDALTRAMALELGPYGIRVNAVNPYC 633
           I SASK A+D   R   L+ G     VN   P C
Sbjct: 121 IVSASKLAIDKCDRLWVLDSG----LVNNTQPMC 150


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +1

Query: 532 IYSASKAALDALTRAMALELGPYGIRVNAVNPYC 633
           I SASK A+D   R   L+ G     VN   P C
Sbjct: 121 IVSASKLAIDKCDRLWVLDSG----LVNNTQPMC 150


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +1

Query: 532 IYSASKAALDALTRAMALELGPYGIRVNAVNPYC 633
           I SASK A+D   R   L+ G     VN   P C
Sbjct: 121 IVSASKLAIDKCDRLWVLDSG----LVNNTQPMC 150


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -3

Query: 280 SRQHQRQQYQ*KGIHSGGSPSEIWSE 203
           + Q  + QYQ   +H  G  + +W++
Sbjct: 278 TEQFVKSQYQANNVHYQGKENILWTQ 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,108
Number of Sequences: 438
Number of extensions: 3671
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)