Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I22
(479 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4; Strongyl... 103 2e-21
UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollage... 102 5e-21
UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n... 102 5e-21
UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;... 99 3e-20
UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whol... 99 3e-20
UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor [C... 99 3e-20
UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 100 3e-20
UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n... 100 3e-20
UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whol... 94 2e-18
UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n... 94 2e-18
UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellu... 93 2e-18
UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocent... 92 7e-18
UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen t... 91 9e-18
UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46; Eumet... 91 9e-18
UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor (G... 90 3e-17
UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio "Co... 85 6e-16
UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3; Endopterygota|... 85 8e-16
UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; ... 83 2e-15
UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Da... 83 2e-15
UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 ty... 81 2e-14
UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabd... 81 2e-14
UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice ... 80 2e-14
UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n... 80 2e-14
UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstat... 80 3e-14
UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whol... 77 2e-13
UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precurso... 77 2e-13
UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Da... 74 2e-12
UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG168... 73 3e-12
UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella ve... 64 1e-09
UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella ve... 64 2e-09
UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma j... 53 3e-06
UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium ... 52 7e-06
UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2; Platyhelminth... 49 5e-05
UniRef50_Q0AFB8 Cluster: PepSY-associated TM helix domain protei... 36 0.62
UniRef50_Q5AR14 Cluster: Putative uncharacterized protein; n=1; ... 35 0.82
UniRef50_Q22AS4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.5
UniRef50_A4F6M9 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_A5K8N9 Cluster: Putative uncharacterized protein; n=2; ... 32 5.8
UniRef50_Q6K765 Cluster: Putative phragmoplast-associated kinesi... 32 7.7
>UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4;
Strongylocentrotus purpuratus|Rep: Alpha2(IV)-like
collagen - Strongylocentrotus purpuratus (Purple sea
urchin)
Length = 1747
Score = 103 bits (247), Expect = 2e-21
Identities = 43/65 (66%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
Frame = +1
Query: 286 RLFAIIYRR-NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP 462
R F++++ N AH+QDLG AGSC+++FSTMPFLFC+ N+VCNYASRNDRSYWL+T +P
Sbjct: 1550 RGFSVLFSMGNGHAHHQDLGDAGSCLQRFSTMPFLFCNFNNVCNYASRNDRSYWLTTNEP 1609
Query: 463 IPMMP 477
+PMMP
Sbjct: 1610 LPMMP 1614
Score = 37.9 bits (84), Expect = 0.12
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLY 304
G + RHSQ VP C G V+LW G+S+L+
Sbjct: 1526 GHFITRHSQSRNVPSCPAGTVELWRGFSVLF 1556
Score = 35.5 bits (78), Expect = 0.62
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 301 IYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLS 450
+Y + Q L GSC+ F PF+ C+ C++ S N+ S+WL+
Sbjct: 1664 MYTAASEGGGQGLESVGSCLENFRATPFIECNGRGNCHFFS-NEYSFWLT 1712
Score = 32.3 bits (70), Expect = 5.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 221 LVRHSQREVVPQCEPGHVKLWDGYS 295
L HSQ + +PQC G LW GYS
Sbjct: 1637 LAIHSQSQEIPQCPGGWRSLWTGYS 1661
>UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollagen,
type IV, alpha 6; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to procollagen, type IV, alpha 6 - Rattus
norvegicus
Length = 1405
Score = 102 bits (244), Expect = 5e-21
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +1
Query: 316 EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 477
EKAHNQDLG+AGSC+ +FSTMPF++C++N+VC+YA RND+SYWLST PIPMMP
Sbjct: 1283 EKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMP 1336
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYID-ETKRH 325
G LV+HSQ E VP C G +LW GYSLL+++ + K H
Sbjct: 1248 GYTLVKHSQSEHVPPCPIGMSQLWVGYSLLFVEGQEKAH 1286
>UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n=9;
Rattus norvegicus|Rep: UPI0000DBF028 UniRef100 entry -
Rattus norvegicus
Length = 1549
Score = 102 bits (244), Expect = 5e-21
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +1
Query: 316 EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 477
EKAHNQDLG+AGSC+ +FSTMPF++C++N+VC+YA RND+SYWLST PIPMMP
Sbjct: 1447 EKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMP 1500
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYID-ETKRH 325
G LV+HSQ E VP C G +LW GYSLL+++ + K H
Sbjct: 1412 GYTLVKHSQSEHVPPCPIGMSQLWVGYSLLFVEGQEKAH 1450
>UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;
Bos taurus|Rep: Collagen alpha-2(IV) chain - Bos Taurus
Length = 227
Score = 99 bits (238), Expect = 3e-20
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +1
Query: 298 IIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 477
+ + EKAHNQDLG AGSC+ +FSTMPFL+C+ DVC YASRND+SYWLST P+PMMP
Sbjct: 33 LYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMP 92
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYID-ETKRH 325
G LLV+HSQ + P C G KLW GYSLLY + + K H
Sbjct: 4 GYLLVKHSQTDKEPMCPVGMNKLWSGYSLLYFEGQEKAH 42
Score = 33.9 bits (74), Expect = 1.9
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G F + ++ Q L GSC+ F PF+ C+ C+Y + N S+WL+T
Sbjct: 136 IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYA-NKYSFWLTT 193
>UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 471
Score = 99 bits (238), Expect = 3e-20
Identities = 40/61 (65%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y + NE+AH QDLG AGSC+R+FSTMPF+FC++N+VCN+ASRND SYWLST +P+P
Sbjct: 233 YSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMP 292
Query: 469 M 471
M
Sbjct: 293 M 293
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G L+ RHSQ + VP C G ++DGYSLLY+ +R
Sbjct: 207 GFLITRHSQAQDVPYCPDGTNLIYDGYSLLYVQGNER 243
Score = 41.9 bits (94), Expect = 0.007
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 471
Q L GSC+ +F + PF+ C CNY N S+WL+T +P M
Sbjct: 398 QALASPGSCLEEFRSAPFIECHGRGTCNYYG-NSYSFWLATVEPSEM 443
>UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor
[Contains: Canstatin]; n=48; Tetrapoda|Rep: Collagen
alpha-2(IV) chain precursor [Contains: Canstatin] - Homo
sapiens (Human)
Length = 1712
Score = 99 bits (238), Expect = 3e-20
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +1
Query: 298 IIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 477
+ + EKAHNQDLG AGSC+ +FSTMPFL+C+ DVC YASRND+SYWLST P+PMMP
Sbjct: 1518 LYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMP 1577
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYID-ETKRH 325
G LLV+HSQ + P C G KLW GYSLLY + + K H
Sbjct: 1489 GYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAH 1527
Score = 32.7 bits (71), Expect = 4.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G F + ++ Q L GSC+ F PF+ C+ C+Y + N S+WL+T
Sbjct: 1621 IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYA-NKYSFWLTT 1678
>UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome shotgun
sequence; n=5; Euteleostomi|Rep: Chromosome 2 SCAF14781,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1468
Score = 99.5 bits (237), Expect = 3e-20
Identities = 41/63 (65%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIYRRN-EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y EKAHNQDLG AGSC+ +FSTMPFL+C+ D+C YASRND+SYWLST P+P
Sbjct: 1302 YSLLYMEGQEKAHNQDLGLAGSCLPRFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLP 1361
Query: 469 MMP 477
MMP
Sbjct: 1362 MMP 1364
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYID-ETKRH 325
G LLV+HSQ E +P C G KLW GYSLLY++ + K H
Sbjct: 1276 GYLLVKHSQTEQIPMCPVGMAKLWSGYSLLYMEGQEKAH 1314
Score = 36.7 bits (81), Expect = 0.27
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G F + + Q L GSC+ F T PF+ C+ C+Y + N S+WLS+
Sbjct: 1408 IGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNGAKGTCHYFA-NKHSFWLSS 1465
>UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n=61;
Eumetazoa|Rep: Collagen alpha-5(IV) chain precursor -
Homo sapiens (Human)
Length = 1685
Score = 99.5 bits (237), Expect = 3e-20
Identities = 40/61 (65%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
F+++Y + N++AH QDLG AGSC+R+FSTMPF+FC++N+VCN+ASRND SYWLST +P+P
Sbjct: 1487 FSLLYVQGNKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMP 1546
Query: 469 M 471
M
Sbjct: 1547 M 1547
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 194 TTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
T+ G L+ RHSQ PQC G +++++G+SLLY+ KR
Sbjct: 1455 TSSVAHGFLITRHSQTTDAPQCPQGTLQVYEGFSLLYVQGNKR 1497
Score = 39.5 bits (88), Expect = 0.038
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST 453
+G F + + Q L GSC+ +F + PF+ C CNY + N S+WL+T
Sbjct: 1595 IGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYA-NSYSFWLAT 1651
>UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF11805, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1026
Score = 93.9 bits (223), Expect = 2e-18
Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y EKAHNQDLG GSC+ +FST+PFL+C N+VC YASRND+SYWLST IP
Sbjct: 830 YSLLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCSPNEVCYYASRNDKSYWLSTTASIP 889
Query: 469 MMP 477
MMP
Sbjct: 890 MMP 892
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYID-ETKRH 325
G LV+HSQ VP C G KLWDGYSLLY++ + K H
Sbjct: 804 GYTLVKHSQDAQVPMCPQGMAKLWDGYSLLYVEGQEKAH 842
Score = 34.3 bits (75), Expect = 1.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLSTGQP 462
Q L GSC+ F PF+ C+ C+Y + N S+WL+T P
Sbjct: 953 QSLVSPGSCLEDFRATPFIECNGAKGTCHYFA-NKYSFWLTTVDP 996
Score = 32.7 bits (71), Expect = 4.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 230 HSQREVVPQCEPGHVKLWDGYSLL 301
HSQ +P C PG LW GYS L
Sbjct: 918 HSQDMTIPTCPPGWRSLWIGYSFL 941
>UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n=36;
Euteleostomi|Rep: Collagen alpha-4(IV) chain precursor -
Homo sapiens (Human)
Length = 1690
Score = 93.9 bits (223), Expect = 2e-18
Identities = 42/75 (56%), Positives = 57/75 (76%), Gaps = 5/75 (6%)
Frame = +1
Query: 268 TCKI-MGRL---FAIIYRRN-EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRND 432
TC + M RL ++++Y EKAHNQDLG AGSC+ FST+PF +C+++ VC+YA RND
Sbjct: 1479 TCPLGMPRLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRND 1538
Query: 433 RSYWLSTGQPIPMMP 477
RSYWL++ P+PMMP
Sbjct: 1539 RSYWLASAAPLPMMP 1553
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 203 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYID-ETKRH 325
YL G LLV HSQ + P C G +LW GYSLLY++ + K H
Sbjct: 1462 YLGGFLLVLHSQTDQEPTCPLGMPRLWTGYSLLYLEGQEKAH 1503
>UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellular
organisms|Rep: Collagen alpha-3(IV) chain - Bos taurus
(Bovine)
Length = 471
Score = 93.5 bits (222), Expect = 2e-18
Identities = 39/61 (63%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
F++++ + NE+AH QDLG GSC+++F+TMPFLFC++NDVCN+ASRND SYWLST IP
Sbjct: 272 FSLLFVQGNEQAHGQDLGTLGSCLQRFTTMPFLFCNINDVCNFASRNDYSYWLSTPAMIP 331
Query: 469 M 471
M
Sbjct: 332 M 332
Score = 40.3 bits (90), Expect = 0.022
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 283 GRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP 462
G F + + Q L GSC+ +F PF+ C CNY S N S+WL++ P
Sbjct: 381 GFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRGTCNYYS-NSYSFWLASLDP 439
Score = 35.9 bits (79), Expect = 0.47
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 206 LTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYI 307
+ G + RHSQ +P C G L+ G+SLL++
Sbjct: 244 MRGFVFTRHSQTTAIPSCPEGTEPLYSGFSLLFV 277
>UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocentrotus
purpuratus|Rep: 3 alpha procollagen - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 1752
Score = 91.9 bits (218), Expect = 7e-18
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +1
Query: 268 TCKIMGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWL 447
T K+ + + NE+ H QDLG GSC+++FSTMPFLFC++N+VC+ ASRND SYWL
Sbjct: 1547 TAKMWHGYSLLFVQGNERGHGQDLGKPGSCLKRFSTMPFLFCNINNVCHVASRNDYSYWL 1606
Query: 448 STGQPIPM 471
ST +P+PM
Sbjct: 1607 STTEPMPM 1614
Score = 46.4 bits (105), Expect = 3e-04
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 209 TGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
+G + RHSQ +PQC G K+W GYSLL++ +R
Sbjct: 1527 SGFFITRHSQTTSIPQCPQGTAKMWHGYSLLFVQGNER 1564
Score = 33.1 bits (72), Expect = 3.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST 453
Q L GSC+ F + PF+ C + CNY + ++WLS+
Sbjct: 1679 QMLSSPGSCLEDFRSSPFIECHGDGKCNYYA-TTYTFWLSS 1718
>UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen type
IV CG4145-PA, isoform A isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Collagen type IV
CG4145-PA, isoform A isoform 1 - Apis mellifera
Length = 1913
Score = 91.5 bits (217), Expect = 9e-18
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1
Query: 343 YAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 477
YAGSCVRKFSTMPFLFCD+N+VC+Y +R DRSYWLST PIPMMP
Sbjct: 1734 YAGSCVRKFSTMPFLFCDINNVCHYGNRGDRSYWLSTTSPIPMMP 1778
Score = 67.3 bits (157), Expect = 2e-10
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +2
Query: 197 TDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
+DYLTGILLV+HSQ +++P C+ GH+KLW+GYSLL+ D +R
Sbjct: 1661 SDYLTGILLVKHSQSQLLPVCDAGHIKLWEGYSLLFTDGDER 1702
Score = 34.3 bits (75), Expect = 1.4
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLN-DVCNYASRNDRSYWLST 453
Q L +GSC+ F PF+ C+ N C+Y N+ S+W++T
Sbjct: 1839 QSLSSSGSCLEDFRATPFIECNGNKGQCHY-YMNEISFWMAT 1879
>UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46;
Eumetazoa|Rep: Collagen alpha-4(IV) chain - Oryctolagus
cuniculus (Rabbit)
Length = 623
Score = 91.5 bits (217), Expect = 9e-18
Identities = 36/63 (57%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIYRRN-EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y EKAHNQDLG AGSC+ FST+PF +C+++ VC+YA RND+SYWL++ P+P
Sbjct: 424 YSLLYLEGQEKAHNQDLGLAGSCLPIFSTLPFAYCNIHQVCHYAQRNDKSYWLASAGPLP 483
Query: 469 MMP 477
MMP
Sbjct: 484 MMP 486
Score = 48.4 bits (110), Expect = 8e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 203 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYID-ETKRH 325
YL+G LLV HSQ + P C G +LW GYSLLY++ + K H
Sbjct: 395 YLSGFLLVLHSQTDQEPACPMGMPRLWTGYSLLYLEGQEKAH 436
Score = 33.5 bits (73), Expect = 2.5
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLSTG 456
+G F + ++ Q L GSC+ F PFL C C++ + N+ S+WL+T
Sbjct: 530 IGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFA-NEYSFWLTTV 588
Query: 457 QP 462
P
Sbjct: 589 PP 590
>UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin]; n=61;
Eumetazoa|Rep: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin] - Homo
sapiens (Human)
Length = 1670
Score = 89.8 bits (213), Expect = 3e-17
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 471
N++AH QDLG GSC+++F+TMPFLFC++NDVCN+ASRND SYWLST +PM
Sbjct: 1479 NQRAHGQDLGTLGSCLQRFTTMPFLFCNVNDVCNFASRNDYSYWLSTPALMPM 1531
Score = 41.1 bits (92), Expect = 0.013
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 283 GRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP 462
G F + + Q L GSC+ +F PFL C CNY S N S+WL++ P
Sbjct: 1580 GFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRGTCNYYS-NSYSFWLASLNP 1638
Score = 37.9 bits (84), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G + RHSQ +P C G V L+ G+S L++ +R
Sbjct: 1445 GFVFTRHSQTTAIPSCPEGTVPLYSGFSFLFVQGNQR 1481
>UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio
"Collagen, type I, alpha 3.; n=1; Takifugu rubripes|Rep:
Homolog of Brachydanio rerio "Collagen, type I, alpha 3.
- Takifugu rubripes
Length = 1426
Score = 85.4 bits (202), Expect = 6e-16
Identities = 37/63 (58%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIYRRNEK-AHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
+++ Y + +K AH QDLG AGSC+R FSTMPF +C+ C+++SRND+SYWLST PIP
Sbjct: 1231 YSLAYLKGQKNAHAQDLGQAGSCLRVFSTMPFSYCN-KAACHFSSRNDKSYWLSTAAPIP 1289
Query: 469 MMP 477
MMP
Sbjct: 1290 MMP 1292
Score = 39.9 bits (89), Expect = 0.029
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETK 319
G LLV HSQ VP+C G LW GYSL Y+ K
Sbjct: 1205 GFLLVIHSQSVQVPKCPDGSSLLWVGYSLAYLKGQK 1240
>UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3;
Endopterygota|Rep: ENSANGP00000016652 - Anopheles
gambiae str. PEST
Length = 461
Score = 85.0 bits (201), Expect = 8e-16
Identities = 33/53 (62%), Positives = 45/53 (84%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 471
+ ++ QDLG AGSC+R+FSTMPF+FCD+N+VCNYAS ND + WL+T +P+PM
Sbjct: 218 SSRSVGQDLGAAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPMPM 270
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKRHI 328
G L RHSQ+ +P+C KLWDGYSL+ + + R +
Sbjct: 184 GYLFARHSQKVTIPECPINTYKLWDGYSLVNVIASSRSV 222
Score = 32.3 bits (70), Expect = 5.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLS 450
+G +A+ N QD GSC+ +F P + C + CN+ S+WL+
Sbjct: 318 LGYSYAMHTSDNSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYD-GISSFWLT 373
>UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; n=3;
Danio rerio|Rep: Type IV collagen alpha 4 chain - Danio
rerio
Length = 1639
Score = 83.4 bits (197), Expect = 2e-15
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIYRRN-EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y E+AH QDLG AGSC+ FSTMPF C++ D C+YASRND+SYWLST PIP
Sbjct: 1443 YSLLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCCNM-DTCDYASRNDKSYWLSTNAPIP 1501
Query: 469 MMP 477
P
Sbjct: 1502 NKP 1504
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +2
Query: 209 TGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKRHITK 334
TG LLV HSQ VP C G +LW+GYSLLY++ +R T+
Sbjct: 1416 TGFLLVMHSQSRYVPTCPAGLTQLWNGYSLLYLEGQERAHTQ 1457
>UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Danio
rerio|Rep: Type IV collagen alpha 4 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 240
Score = 83.4 bits (197), Expect = 2e-15
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIYRRN-EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y E+AH QDLG AGSC+ FSTMPF C++ D C+YASRND+SYWLST PIP
Sbjct: 41 YSLLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCCNM-DTCDYASRNDKSYWLSTNAPIP 99
Query: 469 MMP 477
P
Sbjct: 100 NKP 102
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +2
Query: 209 TGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKRHITK 334
TG LLV HSQ VP C G +LW+GYSLLY++ +R T+
Sbjct: 14 TGFLLVMHSQSRYVPTCPAGLTQLWNGYSLLYLEGQERAHTQ 55
>UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 type IV
collagen; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to alpha-5 type IV collagen - Nasonia vitripennis
Length = 1702
Score = 80.6 bits (190), Expect = 2e-14
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 471
N AH QDLG GSC++KFS MPF C+LN+VC+YA+RND SYWLS+ + +PM
Sbjct: 1408 NSYAHAQDLGTPGSCLKKFSVMPFNVCNLNNVCDYANRNDYSYWLSSNEQMPM 1460
Score = 41.1 bits (92), Expect = 0.013
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYI 307
G RHSQ ++P C VK+WDG+SLL++
Sbjct: 1374 GFYFARHSQSAMIPVCPRNTVKMWDGFSLLHV 1405
Score = 35.5 bits (78), Expect = 0.62
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 218 LLVRHSQREVVPQCEPGHVKLWDGYSLL 301
L+V HSQ +P+C G +LW GYS L
Sbjct: 1486 LIVMHSQSMAIPECPGGWEELWAGYSFL 1513
Score = 35.5 bits (78), Expect = 0.62
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST 453
Q L GSC+ +F PF+ C CN+ S SYW++T
Sbjct: 1525 QPLSSPGSCLEEFRARPFIECRGQGTCNFFS-TAVSYWMAT 1564
>UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabditis
elegans|Rep: Isoform b of P17139 - Caenorhabditis elegans
Length = 1502
Score = 80.6 bits (190), Expect = 2e-14
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI- 465
++++Y + N +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+
Sbjct: 1304 YSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMT 1363
Query: 466 PMM 474
PMM
Sbjct: 1364 PMM 1366
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G +HSQ VPQC PG +LW+GYSLLY+ R
Sbjct: 1278 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGR 1314
Score = 34.7 bits (76), Expect = 1.1
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
CA + T I+ V HSQ VPQC G +W GYS +
Sbjct: 1381 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFV 1417
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLS 450
Q L GSC+ +F +PF+ C CNY + N +W S
Sbjct: 1429 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWPS 1467
>UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice
Isoform 1 of Collagen alpha 3; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
of Collagen alpha 3 - Takifugu rubripes
Length = 1258
Score = 80.2 bits (189), Expect = 2e-14
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
N++ H QDLG GSC+ FSTMPFL CD C YASRND SYWLSTG+ +P
Sbjct: 1071 NDRVHGQDLGTPGSCLPHFSTMPFLVCDTESNCRYASRNDYSYWLSTGKALP 1122
Score = 33.5 bits (73), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
CA + + ++ V HSQ +P C V LW GYS +
Sbjct: 1140 CAVCETTSNVIAV-HSQTTQIPDCPQDWVSLWSGYSFV 1176
Score = 33.5 bits (73), Expect = 2.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 328 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP 462
+Q L GSC+ F +PF+ C CNY + S+W+++ P
Sbjct: 1187 SQPLISPGSCLETFRKVPFIECHGRGTCNYYP-DSYSFWMASLDP 1230
>UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n=5;
Diptera|Rep: Collagen alpha-1(IV) chain precursor -
Drosophila melanogaster (Fruit fly)
Length = 1775
Score = 80.2 bits (189), Expect = 2e-14
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 477
N+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPMMP
Sbjct: 1588 NDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPMMP 1639
Score = 66.5 bits (155), Expect = 3e-10
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +2
Query: 191 ATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYID 310
A DYLTGIL+ RHSQ E VP C GH +LW GYSLLY+D
Sbjct: 1547 AALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVD 1586
>UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstatin;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
"Tumstatin - Takifugu rubripes
Length = 1374
Score = 79.8 bits (188), Expect = 3e-14
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI 465
N +AH QDLG GSC+ +F+TMPFLFC+ + C YASRND SYWLST Q +
Sbjct: 1185 NNRAHGQDLGTLGSCLPRFTTMPFLFCNTDSTCRYASRNDYSYWLSTNQVV 1235
Score = 39.9 bits (89), Expect = 0.029
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
C + L RHSQ +P+C G +++ GYSLL+I+ R
Sbjct: 1143 CIDAPHQDSFLFTRHSQELSIPECPVGSTEVYSGYSLLFINGNNR 1187
Score = 38.7 bits (86), Expect = 0.067
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 471
Q L GSC+ +F +PF+ C CNY + + SYWL+ P M
Sbjct: 1302 QPLASPGSCLEQFRKIPFIECHGRGTCNYYT-DSYSYWLAALSPHDM 1347
Score = 35.5 bits (78), Expect = 0.62
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
C+ + T ++ + HSQ VVP C G + LW GYS +
Sbjct: 1254 CSVCETRTNVIAI-HSQTSVVPDCPLGWLPLWVGYSFV 1290
>UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14677,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 856
Score = 77.4 bits (182), Expect = 2e-13
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI 465
N +AH QDLG GSC+ +F+TMPFLFC+ + C YASRND SYWLST + +
Sbjct: 769 NNRAHGQDLGTLGSCLPRFTTMPFLFCNTDRTCRYASRNDYSYWLSTNKMV 819
Score = 39.9 bits (89), Expect = 0.029
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
C L RHSQ +P+C G +++ GYSLL+I+ R
Sbjct: 727 CTDAPQQDSFLFTRHSQELYIPECPAGSTQVYSGYSLLFINGNNR 771
>UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precursor;
n=1; Hydra vulgaris|Rep: Type IV collagen alpha 1 chain
precursor - Hydra attenuata (Hydra) (Hydra vulgaris)
Length = 1723
Score = 77.0 bits (181), Expect = 2e-13
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = +1
Query: 292 FAIIYRR-NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ 459
++ +Y + NE+A QDLG GSC+++FSTMPFLFCD+ + C ASRND S+WLST +
Sbjct: 1527 YSFLYAQGNERAFGQDLGQPGSCLKRFSTMPFLFCDIQNKCVVASRNDYSFWLSTAE 1583
Score = 40.7 bits (91), Expect = 0.017
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G LV+HSQ VP C G +W+GYS LY +R
Sbjct: 1501 GFYLVKHSQSIKVPSCPAGMQTMWEGYSFLYAQGNER 1537
Score = 31.9 bits (69), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 218 LLVRHSQREVVPQCEPGHVKLWDGYSLL 301
+L HSQ E+ P+C G LW G+S L
Sbjct: 1611 VLAVHSQSELDPKCPDGWENLWTGFSFL 1638
>UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Danio
rerio|Rep: Type IV collagen alpha 3 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 244
Score = 73.7 bits (173), Expect = 2e-12
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI 465
N + H QDLG GSC+ F+TMPF+ C+ ++ C YASRND SYWLST P+
Sbjct: 51 NNRGHGQDLGTLGSCLPMFNTMPFMVCNRDETCRYASRNDYSYWLSTDTPM 101
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G L RHSQ V+P+C G +L+ GYSLL+I+ R
Sbjct: 17 GFLFTRHSQTTVIPECPAGSKRLYTGYSLLFINGNNR 53
Score = 35.5 bits (78), Expect = 0.62
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
C+ + + ++ + HSQ +PQC G + LW+GYS +
Sbjct: 120 CSVCEAIANVIAI-HSQTINIPQCPVGWLSLWEGYSFV 156
Score = 33.9 bits (74), Expect = 1.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST 453
Q L GSC+ +F +PF+ C CN+ + SYWL++
Sbjct: 168 QPLVSPGSCLEQFRKIPFIECHGRGTCNFYP-DSYSYWLAS 207
>UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG16858-PA
- Drosophila melanogaster (Fruit fly)
Length = 1940
Score = 73.3 bits (172), Expect = 3e-12
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +1
Query: 319 KAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPM 471
+A QDLG +GSC+ +F+TMP++ CD+ +VC++A ND S WLST +P+PM
Sbjct: 1551 RAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPM 1601
Score = 35.5 bits (78), Expect = 0.62
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSL 298
G + RHSQ VPQC LW+GYSL
Sbjct: 1515 GFIFARHSQSVHVPQCPANTNLLWEGYSL 1543
>UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 590
Score = 64.5 bits (150), Expect = 1e-09
Identities = 25/50 (50%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRS 438
++++Y + ++ +H QDLG AGSC+++F+TMP+L+C++ CNYASRND S
Sbjct: 501 YSLLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCNIFGKCNYASRNDYS 550
Score = 47.6 bits (108), Expect = 1e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYI 307
G +V+HSQ P+C P + KLWDGYSLLY+
Sbjct: 475 GFYIVKHSQTTTPPECPPTYDKLWDGYSLLYV 506
>UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 331
Score = 63.7 bits (148), Expect = 2e-09
Identities = 24/48 (50%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRND 432
++++Y + ++ +H QDLG AGSC+++F+TMP+L+C++ CNYASRND
Sbjct: 282 YSLLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCNIFGKCNYASRND 329
Score = 47.6 bits (108), Expect = 1e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYI 307
G +V+HSQ P+C P + KLWDGYSLLY+
Sbjct: 256 GFYIVKHSQTTTPPECPPTYDKLWDGYSLLYV 287
>UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08138 protein - Schistosoma
japonicum (Blood fluke)
Length = 206
Score = 53.2 bits (122), Expect = 3e-06
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 313 NEKAHNQDLGYAGSCVRKFSTMPF--LFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 477
++ + DLG GSC+RKFS MPF F +N C RN RSYWLST + + P
Sbjct: 127 DDDSTTMDLGTPGSCLRKFSIMPFANCFAKVNGNCQINMRNGRSYWLSTLEQYMLSP 183
>UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium
jarrei|Rep: Collagen type IV - Pseudocorticium jarrei
Length = 854
Score = 52.0 bits (119), Expect = 7e-06
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 477
QDLG GSC+ F MP + C+ C +A R D SYWLST P +P
Sbjct: 669 QDLGDPGSCMPSFHPMPVVRCNPMQRCEFARRKDESYWLSTNATRPPIP 717
Score = 40.7 bits (91), Expect = 0.017
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYI 307
G+LLV HSQ +PQC + +LW GYSLL +
Sbjct: 629 GLLLVVHSQTTNIPQCPNDYTRLWVGYSLLQL 660
Score = 34.3 bits (75), Expect = 1.4
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 215 ILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
I + HSQ VP C PG V LW G+S L
Sbjct: 738 ISIAVHSQDSNVPDCFPGWVTLWTGFSFL 766
Score = 32.3 bits (70), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWL 447
Q L GSC++ F + PF+ C C+Y S + SYW+
Sbjct: 778 QGLESPGSCLQHFRSTPFIGCGGRGQCSYDSVSG-SYWM 815
>UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2;
Platyhelminthes|Rep: SJCHGC06113 protein - Schistosoma
japonicum (Blood fluke)
Length = 587
Score = 49.2 bits (112), Expect = 5e-05
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Frame = +1
Query: 328 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLST-----GQPIPM 471
+ DLG SC+ KFS++P C+ + C + R++RSYWL+T QPIP+
Sbjct: 400 SMDLGTPSSCLSKFSSLPMTQCERDTTCQSSMRHERSYWLATLVPRSEQPIPV 452
>UniRef50_Q0AFB8 Cluster: PepSY-associated TM helix domain protein
precursor; n=2; Nitrosomonas|Rep: PepSY-associated TM
helix domain protein precursor - Nitrosomonas eutropha
(strain C71)
Length = 414
Score = 35.5 bits (78), Expect = 0.62
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -2
Query: 196 SGAWCTWWARWAISSSNTDFS-SFTLYSLEALWTRRSWLSLRTRE-PSVSFHSWGTIQSW 23
S W W W I ++ + +F L+ LW WL L T SV + W T+ +W
Sbjct: 191 SSWWQRWQPAWKIRWRSSPYKLNFDLHRASGLWL---WLILLTFAWSSVYMNMWDTVYTW 247
Query: 22 STRGTI 5
+TR +
Sbjct: 248 TTRAVL 253
>UniRef50_Q5AR14 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 236
Score = 35.1 bits (77), Expect = 0.82
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1
Query: 134 LVHPVFLGSLVDPEVLVVLADQGTLGLLSFLGHHSILEHQGHH 6
L+ PVF+ S ++P V +V A L L+ + HHSIL H
Sbjct: 114 LMGPVFIWSTIEPSVAIVCACLPHLAPLARIAHHSILSSYNSH 156
>UniRef50_Q22AS4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1441
Score = 33.5 bits (73), Expect = 2.5
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 87 QDLRVHKASKEYRVNEEKSVLL-EEMAHLAHQVHHAPLQIT 206
QD+R+ + +E R EEK+VLL E++ H+ Q+ + +IT
Sbjct: 213 QDVRIEELQRELRGQEEKNVLLNEKIKHMQIQIQNRESEIT 253
>UniRef50_A4F6M9 Cluster: Putative uncharacterized protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
uncharacterized protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 542
Score = 32.3 bits (70), Expect = 5.8
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 191 RMVHLVGQVG-HFFQ*YRFLLVHPVFLGSLVDPEVLVVLADQGTLGLLSFLGHHSILEHQ 15
R++HL+G G + R V P+ LG+ DP + G HH +L+H
Sbjct: 462 RVLHLLGSAGGDVARHLRDAGVSPLRLGTTADPGAALTFRTAD--GDWRPFAHHVLLDHS 519
Query: 14 GHHL 3
GHH+
Sbjct: 520 GHHV 523
>UniRef50_A5K8N9 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 507
Score = 32.3 bits (70), Expect = 5.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 272 VKLWDGYSLLYIDETKRHITKISDMQVHAYESSVL 376
+KLWD +L Y+ H K++ + HA ES++L
Sbjct: 309 IKLWDLSNLTYLHSFNFHQKKVNSVSFHANESNIL 343
>UniRef50_Q6K765 Cluster: Putative phragmoplast-associated
kinesin-related protein 1; n=3; Oryza sativa|Rep:
Putative phragmoplast-associated kinesin-related protein
1 - Oryza sativa subsp. japonica (Rice)
Length = 1106
Score = 31.9 bits (69), Expect = 7.7
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 96 RVHKASKEYR-VNEEKSVLLEEMAHLAHQVHH 188
R+ + + YR +EK VLLEE+ HL +Q+H+
Sbjct: 773 RIQEELERYRNFKDEKEVLLEEIQHLKNQLHY 804
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,177,356
Number of Sequences: 1657284
Number of extensions: 8475951
Number of successful extensions: 24262
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 23396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24227
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -