Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I22
(479 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 110 4e-25
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 110 4e-25
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 109 1e-24
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 109 1e-24
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 109 1e-24
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 109 1e-24
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 81 5e-16
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 81 5e-16
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 81 5e-16
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 81 5e-16
AF024503-17|AAG24085.1| 354|Caenorhabditis elegans Hypothetical... 29 1.7
Z27079-4|CAA81591.1| 78|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 28 4.0
Z81564-3|CAB04577.1| 536|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 27 5.3
AF106577-5|AAC78192.2| 353|Caenorhabditis elegans Hypothetical ... 27 5.3
AF068721-4|AAC19260.1| 298|Caenorhabditis elegans Hypothetical ... 27 5.3
AC087081-13|AAK66033.1| 253|Caenorhabditis elegans Hypothetical... 27 5.3
Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical p... 27 9.3
AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical ... 27 9.3
AL022473-1|CAJ43448.1| 339|Caenorhabditis elegans Hypothetical ... 27 9.3
AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear recep... 27 9.3
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 110 bits (265), Expect = 4e-25
Identities = 45/63 (71%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y NEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRND+SYWLST + IP
Sbjct: 1557 YSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNDKSYWLSTSEAIP 1616
Query: 469 MMP 477
MMP
Sbjct: 1617 MMP 1619
Score = 54.0 bits (124), Expect = 5e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 203 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
Y G +LV+HSQ VP+C G KLWDGYSLLYI+ ++
Sbjct: 1528 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEK 1567
Score = 34.3 bits (75), Expect = 0.046
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G FA+ + Q L GSC+ F PF+ C+ C+Y + N S+WL+T
Sbjct: 1663 IGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFA-NKFSFWLTT 1720
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS 295
CA + + V HSQ +P C G LW GYS
Sbjct: 1632 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYS 1666
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 110 bits (265), Expect = 4e-25
Identities = 45/63 (71%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y NEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRND+SYWLST + IP
Sbjct: 1558 YSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNDKSYWLSTSEAIP 1617
Query: 469 MMP 477
MMP
Sbjct: 1618 MMP 1620
Score = 54.0 bits (124), Expect = 5e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 203 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
Y G +LV+HSQ VP+C G KLWDGYSLLYI+ ++
Sbjct: 1529 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEK 1568
Score = 34.3 bits (75), Expect = 0.046
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G FA+ + Q L GSC+ F PF+ C+ C+Y + N S+WL+T
Sbjct: 1664 IGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFA-NKFSFWLTT 1721
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS 295
CA + + V HSQ +P C G LW GYS
Sbjct: 1633 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYS 1667
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 109 bits (261), Expect = 1e-24
Identities = 44/63 (69%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y NEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRN++SYWLST + IP
Sbjct: 1558 YSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIP 1617
Query: 469 MMP 477
MMP
Sbjct: 1618 MMP 1620
Score = 54.0 bits (124), Expect = 5e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 203 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
Y G +LV+HSQ VP+C G KLWDGYSLLYI+ ++
Sbjct: 1529 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEK 1568
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G FA+ + Q GSC+ F PF+ C+ C+Y + N S+WL+T
Sbjct: 1664 IGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFA-NKFSFWLTT 1721
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS 295
CA + + V HSQ +P C G LW GYS
Sbjct: 1633 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYS 1667
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 109 bits (261), Expect = 1e-24
Identities = 44/63 (69%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y NEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRN++SYWLST + IP
Sbjct: 1557 YSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIP 1616
Query: 469 MMP 477
MMP
Sbjct: 1617 MMP 1619
Score = 54.0 bits (124), Expect = 5e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 203 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
Y G +LV+HSQ VP+C G KLWDGYSLLYI+ ++
Sbjct: 1528 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEK 1567
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G FA+ + Q GSC+ F PF+ C+ C+Y + N S+WL+T
Sbjct: 1663 IGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFA-NKFSFWLTT 1720
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS 295
CA + + V HSQ +P C G LW GYS
Sbjct: 1632 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYS 1666
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 109 bits (261), Expect = 1e-24
Identities = 44/63 (69%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y NEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRN++SYWLST + IP
Sbjct: 1594 YSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIP 1653
Query: 469 MMP 477
MMP
Sbjct: 1654 MMP 1656
Score = 54.0 bits (124), Expect = 5e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 203 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
Y G +LV+HSQ VP+C G KLWDGYSLLYI+ ++
Sbjct: 1565 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEK 1604
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G FA+ + Q GSC+ F PF+ C+ C+Y + N S+WL+T
Sbjct: 1700 IGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFA-NKFSFWLTT 1757
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS 295
CA + + V HSQ +P C G LW GYS
Sbjct: 1669 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYS 1703
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 109 bits (261), Expect = 1e-24
Identities = 44/63 (69%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIP 468
++++Y NEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASRN++SYWLST + IP
Sbjct: 60 YSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNEKSYWLSTSEAIP 119
Query: 469 MMP 477
MMP
Sbjct: 120 MMP 122
Score = 54.0 bits (124), Expect = 5e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 203 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
Y G +LV+HSQ VP+C G KLWDGYSLLYI+ ++
Sbjct: 31 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEK 70
Score = 34.3 bits (75), Expect = 0.046
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 MGRLFAIIYRRNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYASRNDRSYWLST 453
+G FA+ + Q L GSC+ F PF+ C+ C+Y + N S+WL+T
Sbjct: 166 IGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFA-NKFSFWLTT 223
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS 295
CA + + V HSQ +P C G LW GYS
Sbjct: 135 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYS 169
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 80.6 bits (190), Expect = 5e-16
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI- 465
++++Y + N +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+
Sbjct: 1304 YSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMT 1363
Query: 466 PMM 474
PMM
Sbjct: 1364 PMM 1366
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G +HSQ VPQC PG +LW+GYSLLY+ R
Sbjct: 1278 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGR 1314
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLS 450
Q L GSC+ +F +PF+ C CNY + N +WLS
Sbjct: 1429 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWLS 1467
Score = 34.7 bits (76), Expect = 0.035
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
CA + T I+ V HSQ VPQC G +W GYS +
Sbjct: 1381 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFV 1417
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 80.6 bits (190), Expect = 5e-16
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI- 465
++++Y + N +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+
Sbjct: 1561 YSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMT 1620
Query: 466 PMM 474
PMM
Sbjct: 1621 PMM 1623
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G +HSQ VPQC PG +LW+GYSLLY+ R
Sbjct: 1535 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGR 1571
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLS 450
Q L GSC+ +F +PF+ C CNY + N +WLS
Sbjct: 1686 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWLS 1724
Score = 34.7 bits (76), Expect = 0.035
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
CA + T I+ V HSQ VPQC G +W GYS +
Sbjct: 1638 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFV 1674
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 80.6 bits (190), Expect = 5e-16
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI- 465
++++Y + N +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+
Sbjct: 1560 YSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMT 1619
Query: 466 PMM 474
PMM
Sbjct: 1620 PMM 1622
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G +HSQ VPQC PG +LW+GYSLLY+ R
Sbjct: 1534 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGR 1570
Score = 34.7 bits (76), Expect = 0.035
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
CA + T I+ V HSQ VPQC G +W GYS +
Sbjct: 1637 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFV 1673
Score = 34.7 bits (76), Expect = 0.035
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLS 450
Q L GSC+ +F +PF+ C CNY + N +W S
Sbjct: 1685 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWPS 1723
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 80.6 bits (190), Expect = 5e-16
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 FAIIY-RRNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPI- 465
++++Y + N +A QDLG GSC+ KF+TMPF+FC++N VC+ +SRND S+WLST +P+
Sbjct: 115 YSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMT 174
Query: 466 PMM 474
PMM
Sbjct: 175 PMM 177
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 212 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDETKR 322
G +HSQ VPQC PG +LW+GYSLLY+ R
Sbjct: 89 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGR 125
Score = 34.7 bits (76), Expect = 0.035
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 188 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSLL 301
CA + T I+ V HSQ VPQC G +W GYS +
Sbjct: 192 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFV 228
Score = 34.7 bits (76), Expect = 0.035
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 331 QDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLS 450
Q L GSC+ +F +PF+ C CNY + N +W S
Sbjct: 240 QSLQSPGSCLEEFRAVPFIECHGRGTCNYYATN-HGFWPS 278
>AF024503-17|AAG24085.1| 354|Caenorhabditis elegans Hypothetical
protein F31F4.1 protein.
Length = 354
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -2
Query: 142 DFSSFTLYSLEALWTRRSWLSLRTREPSVSF--HSWGTIQSWSTRG 11
DF + W R WL+ P + F H W +SW RG
Sbjct: 237 DFGKIRILEKGTSWVRDGWLTKSQWHPGIDFMLHGW---KSWQLRG 279
>Z27079-4|CAA81591.1| 78|Caenorhabditis elegans Hypothetical
protein T05G5.4 protein.
Length = 78
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 63 GSLVRKDNQDLRVHKASKEYRVNEEKSVL 149
G+L+RK N R+H+ E V E+K +L
Sbjct: 47 GTLIRKQNYRARIHERMVEQPVTEKKELL 75
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 328 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ 459
NQD+G+ CV KF T +++ C + Y ++ GQ
Sbjct: 61 NQDVGFQSKCVGKFDTGSMATMNMDVACAF-DEISAKYVIAAGQ 103
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 63 GSLVRKDNQDLRVHKASKEYR--VNEEKSVLLEEMAHLAHQVHH 188
G+L R + +HK +E + E S+ E HL+ Q HH
Sbjct: 636 GTLTRSTSAQNNMHKRIEELEEALRESVSITAEREVHLSQQKHH 679
>Z81564-3|CAB04577.1| 536|Caenorhabditis elegans Hypothetical
protein K05C4.3 protein.
Length = 536
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 274 KIMGRLFAIIYRRNEKAHNQDLGYAGSCVRKFST--MPFLFCDLNDVCNYASRNDRSYWL 447
+I+ L +I +K N D+ Y K++T + L+ L + NY+ + D+S+W
Sbjct: 364 RILRSLVSIPNANFDKFINVDVQYLKQIFNKWNTDRLYILYSILAILLNYSDQVDQSFWK 423
Query: 448 STGQ 459
S +
Sbjct: 424 SVNE 427
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 239 REVVPQCEPGHVKLWDGYSLLYIDETKR 322
R V + GHVK+WDG S ++ KR
Sbjct: 272 RLYVTASKDGHVKIWDGVSNRCVETFKR 299
>AF106577-5|AAC78192.2| 353|Caenorhabditis elegans Hypothetical
protein F46F5.14 protein.
Length = 353
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -2
Query: 163 AISSSNTDFSSFTLYSLEALWTRRSWLSLRTREPSVSF--HSWGTIQSWSTRGT 8
A+ TDF + W R WL+ P + F H W + Q T T
Sbjct: 229 AMMGVGTDFGKVRILKKGTGWARDGWLTSMMWHPEIDFMIHGWKSNQLKPTPNT 282
>AF068721-4|AAC19260.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1055.2 protein.
Length = 298
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -2
Query: 163 AISSSNTDFSSFTLYSLEALWTRRSWLSLRTREPSVS--FHSWGTIQ 29
AI +TDF + W + WL+ P + FH W T Q
Sbjct: 172 AIFGVSTDFGKVRIMKKGTGWAKDGWLTSMMWHPELDFMFHGWKTNQ 218
>AC087081-13|AAK66033.1| 253|Caenorhabditis elegans Hypothetical
protein Y82E9BL.6 protein.
Length = 253
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -1
Query: 146 YRFLLVHPVFLGSLVDPEVLVVLADQGTLGLLSFLGHHSILEH 18
YR L+ V +++ P V++++ G + +L+F HS+L H
Sbjct: 75 YRILIAGAVVCLNVLFPVVMILMFLGGWMNILAFAVIHSLLVH 117
>Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 136 SSFTLYSLEALWTRRSWLSLRTREPSVSFHSWGTIQS---WSTR 14
SSF + + S+LS PS SF W TIQS W+ R
Sbjct: 258 SSFGPSDTQIPFCNNSFLSAHCIPPSTSFLRWKTIQSLNKWAQR 301
>AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 136 SSFTLYSLEALWTRRSWLSLRTREPSVSFHSWGTIQS---WSTR 14
SSF + + S+LS PS SF W TIQS W+ R
Sbjct: 258 SSFGPSDTQIPFCNNSFLSAHCIPPSTSFLRWKTIQSLNKWAQR 301
>AL022473-1|CAJ43448.1| 339|Caenorhabditis elegans Hypothetical
protein H27C11.1b protein.
Length = 339
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 136 SSFTLYSLEALWTRRSWLSLRTREPSVSFHSWGTIQS---WSTR 14
SSF + + S+LS PS SF W TIQS W+ R
Sbjct: 158 SSFGPSDTQIPFCNNSFLSAHCIPPSTSFLRWKTIQSLNKWAQR 201
>AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear receptor
NHR-97 protein.
Length = 439
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 136 SSFTLYSLEALWTRRSWLSLRTREPSVSFHSWGTIQS---WSTR 14
SSF + + S+LS PS SF W TIQS W+ R
Sbjct: 258 SSFGPSDTQIPFCNNSFLSAHCIPPSTSFLRWKTIQSLNKWAQR 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,195,393
Number of Sequences: 27780
Number of extensions: 203973
Number of successful extensions: 621
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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