Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I21
(556 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 1.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 3.1
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 3.1
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 3.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 3.1
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 3.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 3.1
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 3.1
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 4.1
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 4.1
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 7.2
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 7.2
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 21 7.2
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 21 7.2
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 21 9.5
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 173 GRHRLA*GPCAEDSTSEIQVSGAPRGGDRPT 81
G H + P E S ++Q S P+ G PT
Sbjct: 159 GYHPSSSYPANEISCPQVQWSATPQAGSTPT 189
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 192 APSSLTWSTSTVKAAASTQKTLERGRSS 275
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 192 APSSLTWSTSTVKAAASTQKTLERGRSS 275
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 192 APSSLTWSTSTVKAAASTQKTLERGRSS 275
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 192 APSSLTWSTSTVKAAASTQKTLERGRSS 275
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 192 APSSLTWSTSTVKAAASTQKTLERGRSS 275
+P+S T STS+ + A + + G+SS
Sbjct: 124 SPASSTSSTSSTEKAGTNNNNSKSGQSS 151
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 192 APSSLTWSTSTVKAAASTQKTLERGRSS 275
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 192 APSSLTWSTSTVKAAASTQKTLERGRSS 275
+P+S T STS+ + A + + G+SS
Sbjct: 168 SPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 215 NKYGKGSSLYPEDARARALV 274
N +G + L+P+DA RA +
Sbjct: 3 NDHGSNTHLHPDDAIRRAKI 22
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 215 NKYGKGSSLYPEDARARALV 274
N +G + L+P+DA RA +
Sbjct: 3 NDHGSNTHLHPDDAIRRAKI 22
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 64 PQSQLKVGRSPPRGAP 111
PQ Q +V R PP +P
Sbjct: 108 PQIQTQVARPPPARSP 123
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 64 PQSQLKVGRSPPRGAP 111
PQ Q +V R PP +P
Sbjct: 108 PQIQTQVARPPPARSP 123
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 107
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 183
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 259
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 335
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 380 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 411
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 456 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 487
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 532 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 563
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 608 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 639
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 379 GQLLXVGRRSGKYLRIEVISESLVEGTNVKVQ 284
G + V +GK + +EV +E K+Q
Sbjct: 48 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ 79
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 347 AGAPADXEKLAKI 385
AGA ++ EK+AKI
Sbjct: 305 AGATSEAEKIAKI 317
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,852
Number of Sequences: 336
Number of extensions: 2155
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -