Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I21
(556 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 46 4e-06
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 43 3e-05
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 42 8e-05
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 30 0.20
SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosacchar... 29 0.61
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.61
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 28 1.1
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 27 1.4
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 27 1.4
SPAC1834.01 |sup45||translation release factor eRF1|Schizosaccha... 26 3.2
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 26 4.3
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 5.7
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 25 5.7
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 25 9.9
SPAC589.09 |||sec14 cytosolic factor family|Schizosaccharomyces ... 25 9.9
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 9.9
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 46.0 bits (104), Expect = 4e-06
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 104 EHLKPEFLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKYGKGSSL-YPEDARARAL 271
E PE L LNP VPTL+D + +IWES AI+ YL +KY + P D
Sbjct: 40 EQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYK 99
Query: 272 VDQRLYF 292
V Q L+F
Sbjct: 100 VIQYLFF 106
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 42.7 bits (96), Expect = 3e-05
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 101 GEHLKPEFLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKY 223
GE E L LNP VPTLVD + +IWES AI+ YL +KY
Sbjct: 39 GEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESDAILIYLADKY 82
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 41.5 bits (93), Expect = 8e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 116 PEFLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYFD 295
P + KL+P P +VDDG++ ES AI+ +LV KYG ED + ++F
Sbjct: 40 PAYTKLSPLGKSPIVVDDGVTYIESAAILEHLVRKYGPSFKPSEEDVAELEKYELWMHFS 99
Query: 296 IGTL 307
+L
Sbjct: 100 EASL 103
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 30.3 bits (65), Expect = 0.20
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -1
Query: 451 QIRAGCVLLTIEEFVQKLESVLDLGQLLXVGRRSGKYLRIEV---ISESLVEGTNVKVQA 281
+I A V + I + KLE V+DL Q+ + R K +IE+ + E+L+E K A
Sbjct: 226 KIPAAAVQIPIGQ-EDKLEGVVDLIQMRAIYNRGSKGEKIEISQQVPENLIELAKEKRSA 284
Query: 280 LIDE 269
LI++
Sbjct: 285 LIEK 288
>SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 28.7 bits (61), Expect = 0.61
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 285 CTLTLVPSTRDSEITSIRKYLPERLPTKRSWP 380
CT+ +P+T++ + R ++P R PTK++WP
Sbjct: 139 CTM-YIPATKEHPL---RIWVPRRSPTKQTWP 166
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.61
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = +3
Query: 195 PSSLTWSTSTVKAAASTQKTLERG----RSSISACTLTLVPSTRDSEITSIRKYLPERLP 362
P + T STST AST T +S S T T +P T +S T + +P P
Sbjct: 360 PPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNS-TTPVTPTVP---P 415
Query: 363 TKRSWPRSRTLSSFWTNSSMVKSTQPALI*P*LT--*ASSQACPASKRPISTSKNTLT 530
T S P T ++ T++S+ ++ P P T +S + P + P++++ T T
Sbjct: 416 TSSSTP--LTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTT 471
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 167 DGLSIWESRAIITYLVNKYGKGSSLYPEDARARALVDQRLYF 292
+ LSI ESR I + ++G S L+P D + A + RL F
Sbjct: 263 NSLSI-ESRLTIANMTTEWGALSGLFPTDEKLLAWYEDRLKF 303
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +3
Query: 198 SSLTWSTSTVKAAASTQKTLERGRSSISACTLTLVPSTRDSEITSIRK-----YLPERLP 362
SS+ W++++ + + K SS+ + + +PS+ ++ +S+ K YLP L
Sbjct: 62 SSVKWASTSFDSTVTAHKEETPYSSSLGSHDSSSLPSSTNNRYSSVLKELCNTYLPSILS 121
Query: 363 TKRSWPRSRTL 395
T S P R L
Sbjct: 122 TYGSLPIRRLL 132
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 338 QVFAGAPADXEKLAKIEDALQLLDKFLDGQKYA 436
Q+ +GAP E+LAK + L++ D D YA
Sbjct: 395 QMKSGAPCRSERLAKYNELLRIEDNLGDSAIYA 427
>SPAC1834.01 |sup45||translation release factor
eRF1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 433
Score = 26.2 bits (55), Expect = 3.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 164 DDGLSIWESRAIITYLVNKYGKGSSL 241
+ + IW+ R ++ L+N +G G+S+
Sbjct: 6 EKAIEIWKIRRLVKQLINCHGNGTSM 31
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 25.8 bits (54), Expect = 4.3
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +2
Query: 113 KPEFLKLNPQHTVPTLVDDGL---SIWESRAIITYLVNKY 223
KP+FL NPQ V + V +GL + E + YL+ +Y
Sbjct: 349 KPKFLDANPQSAVASRVLEGLIECAPAEKDLYLYYLIMRY 388
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 486 PASKRPISTSKNTLTLTG 539
P S+RP STS++++ +TG
Sbjct: 576 PVSRRPSSTSRSSVKITG 593
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.4 bits (53), Expect = 5.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 304 GTNVKVQALIDERPRSSVFWVEAAAFTVL 218
GT+ KV ID +S +F+ AAF +L
Sbjct: 263 GTDAKVFIWIDRNSKSVLFFAFLAAFAIL 291
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 24.6 bits (51), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 468 ASSQACPASKRPISTSKNTLTLTGGMKQS 554
+SS A P K P+ N+LTLT M +S
Sbjct: 1333 SSSLATP-KKEPLRLDTNSLTLTSSMPRS 1360
>SPAC589.09 |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 388
Score = 24.6 bits (51), Expect = 9.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 303 PSTRDSEITSIRKYLPERLPTKRSWPR 383
P T D ++ S Y P +L +++WPR
Sbjct: 34 PETVDEKV-SFESYSPLKLMIQKTWPR 59
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 339 KYLPERLPTKRSWPRSRTLSSFWTNSSMVKST 434
+Y + TK+ R TLS FWT + ST
Sbjct: 289 EYCKSVVSTKKITRRKNTLSDFWTLLHSLPST 320
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,961,458
Number of Sequences: 5004
Number of extensions: 34636
Number of successful extensions: 115
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -