Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I17
(558 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 33 0.12
03_05_0145 + 21254448-21255488 32 0.36
01_05_0635 - 23847255-23847287,23847397-23848083,23848178-238485... 31 0.62
02_05_0278 + 27404914-27404947,27405088-27405228,27405747-274057... 30 1.1
10_02_0072 - 4936950-4937363 29 1.9
06_03_0395 - 20354713-20355570 29 1.9
12_01_0135 + 1042889-1044255,1045368-1045809 29 2.5
10_08_0173 + 15414628-15414890,15415001-15415074,15416322-154164... 29 2.5
04_03_0515 + 16698589-16701066 29 2.5
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009 29 2.5
10_07_0191 + 13934410-13934940 29 3.3
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 3.3
07_03_0706 + 20850634-20850830,20851401-20851576,20851706-20852253 29 3.3
05_07_0035 - 27221338-27221433,27221510-27221599,27222056-272221... 29 3.3
11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598,478... 28 4.4
09_04_0504 + 18180321-18181013 28 4.4
01_07_0041 + 40688242-40688278,40688396-40688502,40688612-406887... 28 4.4
11_06_0409 - 23217558-23218355,23218808-23219297,23219515-232195... 28 5.8
11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679 28 5.8
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 27 7.7
01_01_1153 - 9172529-9172678,9173416-9173642,9174139-9174310 27 7.7
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 33.5 bits (73), Expect = 0.12
Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 230 CSTSGRKLRSSSTRQSIPDAGTRKP*RASPRHSVL-RGGSRRHALGPRDERTPQPPAATP 406
C T RK R++S S D P R S R + R R A G R P PP + P
Sbjct: 205 CPTLPRKGRAASNTFS--DCTPPPPRRPSRRGCLSWRPTMTRRASGSSLRRAPPPPTS-P 261
Query: 407 THGAEVAAQPARQ 445
HGA AQP Q
Sbjct: 262 RHGASDPAQPRHQ 274
>03_05_0145 + 21254448-21255488
Length = 346
Score = 31.9 bits (69), Expect = 0.36
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Frame = +2
Query: 206 LSRKYF*GCSTSGRKLRSSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTP 385
+ +K G + R+ R+ AG + SP + R G H P R
Sbjct: 107 VEKKAIGGMEKGRARRRTPEQRRPKEAAGNGRARSPSPASAQRRYGGGEHLAPPTRPRRE 166
Query: 386 QPPAATPTHGAEVAAQPA---RQLQPHVRRENQARSR*ALLPTTSERTGACER 535
QP + P+ R + VRR N AR +LP +S A +R
Sbjct: 167 QPAVVSGIGCRSGRFSPSAARRAAESAVRRTNSAREADMMLPHSSRTPAAAKR 219
>01_05_0635 -
23847255-23847287,23847397-23848083,23848178-23848540,
23848633-23848725,23848820-23848870,23849031-23849304,
23849766-23850595
Length = 776
Score = 31.1 bits (67), Expect = 0.62
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 320 RHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPHVRREN 472
RH + R + P +ER P PP A P + V +RQ P +EN
Sbjct: 102 RHDAVPAAVLRENMAPPEERAPPPPPAPPPKSSHVVVF-SRQADP-TEKEN 150
>02_05_0278 +
27404914-27404947,27405088-27405228,27405747-27405772,
27406036-27406071,27406296-27406976
Length = 305
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 236 TSGRKLRSSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQP 391
++GR + T S D T R++PR + R SRR + P R +P
Sbjct: 224 SAGRAMGGPRTGGSASDTRTTSTPRSAPRCASARAASRRSSAAPARRRASEP 275
>10_02_0072 - 4936950-4937363
Length = 137
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +2
Query: 311 ASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPHVRRENQARSR* 490
A+ + RGG R+ +G + QPPA + +A PA +A R
Sbjct: 14 AAGKSDASRGGDRKKNVGANKKEINQPPATSTGGKRRLATTPA-------AATTRADVRP 66
Query: 491 ALLPTTSERTGA 526
L PTTS R A
Sbjct: 67 KLQPTTSSRPAA 78
>06_03_0395 - 20354713-20355570
Length = 285
Score = 29.5 bits (63), Expect = 1.9
Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 15/121 (12%)
Frame = +2
Query: 233 STSGRKLRSSSTRQSIPDAGTRKP*RASPRHSVLRGGSRR--HALGPRDERTPQPPAATP 406
+T+ + S+T S TR R RH + G R H P +T P+ +
Sbjct: 30 TTAAAAVEHSATSPSPSSPRTRLFPRCQRRHRLHSHGRHRRCHRREPPPPQTAAAPSPST 89
Query: 407 THGAEVAA-------QPARQLQPH--VRRENQARSR*ALLPTT----SERTGACERCQGR 547
T AA QP Q++P V ++ R R PT + G C RC+G
Sbjct: 90 TKQPATAAAVTNRRRQPTTQIRPRAAVDAADRGRRRQPPPPTAPPLEAPANGCCRRCRGP 149
Query: 548 S 550
S
Sbjct: 150 S 150
>12_01_0135 + 1042889-1044255,1045368-1045809
Length = 602
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 365 PRDERTPQPPAATPTHGAEVAAQPARQLQPHVRRENQARSR 487
P ++P+PP A T A AA A R+E Q R +
Sbjct: 186 PNQPQSPKPPTAEETAAAAAAAAAAAAAAAKERKEEQRRKQ 226
>10_08_0173 +
15414628-15414890,15415001-15415074,15416322-15416401,
15417186-15417231,15417334-15417368,15417751-15417771,
15418418-15419133,15419292-15419324,15419517-15419813,
15420213-15420659,15420738-15420886,15421408-15421697,
15421774-15421898,15422006-15422156
Length = 908
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 318 GDARYGFRVPASGMLCLVELLRSFRPD 238
G A YG+ + A +LC + LRSF P+
Sbjct: 709 GVASYGYTIIAVSLLCQLAALRSFSPE 735
>04_03_0515 + 16698589-16701066
Length = 825
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 257 SSSTRQSIPDAGTRKP*RASP-RHSVLRGGSRRHALGPRDER 379
+SST S A T P R SP H+ R R LGP D R
Sbjct: 87 ASSTAASTTTAATASPARPSPPAHAAFRERLRSGTLGPDDAR 128
>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
Length = 768
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +2
Query: 293 TRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPH 457
TR P R R R G RRH G D P H AE++ P+RQ + H
Sbjct: 415 TRSP-RQCDRGGHSRHGGRRHHAGATDVDNVTDPVHPEPHLAEISL-PSRQQELH 467
>10_07_0191 + 13934410-13934940
Length = 176
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 314 SPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAA 430
SPR S GS A + R P PPAATP+ AA
Sbjct: 53 SPRASTSTAGSAA-ASASTNGRRPSPPAATPSSAPRQAA 90
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +2
Query: 167 QEDWGP*AFT*VGLSRKYF*GCSTSGRKLRSSSTRQSIPDAGTRKP*RASPRHSVLRGGS 346
Q DW + T G +R+Y C T + S T ++ DA ++ R P + + GG+
Sbjct: 136 QSDWKAHSKT-CG-TREYRCDCGTLFSRRDSFITHRAFCDALAQENARMPPIGAGVYGGA 193
Query: 347 RRHALGPRDERTPQPPAATPTHGAEVAA 430
LG PQ PA P + +A
Sbjct: 194 GNMTLGLTGMAAPQLPAGFPDQAGQPSA 221
>07_03_0706 + 20850634-20850830,20851401-20851576,20851706-20852253
Length = 306
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +2
Query: 308 RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQ--PARQLQPHVRRENQAR 481
++ ++ + GG+ R LG R +PPAA H VA P L P + Q
Sbjct: 189 KSRSKNKLRSGGTGRAGLGLGGNRASEPPAAATAHREAVAPSFTPPPILPPQPVQPQQQL 248
Query: 482 SR*ALLPTTSERTGACERCQGRS 550
P TS + + +R G S
Sbjct: 249 VSPVAAP-TSLSSSSSDRSSGSS 270
>05_07_0035 -
27221338-27221433,27221510-27221599,27222056-27222115,
27222231-27222523,27222601-27222757,27222917-27223261,
27223890-27224020,27224119-27224596,27224817-27225563
Length = 798
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +2
Query: 257 SSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPT 409
SSST + + + RA P + RG GP D P PP P+
Sbjct: 36 SSSTTAAASSSSSSGGNRAPPAPNPTRGAPWLQKWGPTDPAAPPPPPPAPS 86
>11_01_0600 -
4780579-4780839,4781256-4781324,4781535-4781598,
4781791-4781919,4782234-4782541
Length = 276
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/83 (27%), Positives = 30/83 (36%)
Frame = +2
Query: 257 SSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQP 436
S TR+ P P VL G+RR P + A+ P A A P
Sbjct: 185 SDDTREDSPPFMRPCPTSELAGGRVLHAGARRRQPRPSRRSSAAAAASAPPASASSALLP 244
Query: 437 ARQLQPHVRRENQARSR*ALLPT 505
H+R + RSR +PT
Sbjct: 245 WGPALSHLREVDWERSRWDSIPT 267
>09_04_0504 + 18180321-18181013
Length = 230
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +2
Query: 242 GRKLRSSSTRQSIPDAGTRKP*RASPRHSVLRG--GSRRHALGPRDERTPQPPAATPTHG 415
G + S+S+ + A + +SP S R RR P + P PP T
Sbjct: 90 GSRKSSTSSSSAAAAAASSSSSPSSPAKSPKRSKNSKRRRVSPPPPQPVPAPPPPTTADA 149
Query: 416 AEVAAQPA 439
A+VAA A
Sbjct: 150 ADVAAPTA 157
>01_07_0041 +
40688242-40688278,40688396-40688502,40688612-40688707,
40688859-40688915,40689033-40689194,40689310-40689394,
40689648-40689738,40689813-40689977,40690121-40690240,
40690330-40690402,40690482-40690650,40690741-40691651,
40691839-40691931,40692065-40692255,40692343-40692455,
40692757-40692783,40693915-40693949
Length = 843
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 117 PLYETLTAVCEGGLYRVKRTGDLKHLLELGCQENIFEDVLHQV 245
PLY+ L C G L V R GDL G E + E ++QV
Sbjct: 15 PLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQV-EASMNQV 56
>11_06_0409 -
23217558-23218355,23218808-23219297,23219515-23219591,
23219624-23219863,23220338-23220481,23220522-23220582,
23220875-23220934,23221097-23221192,23221306-23221398,
23221494-23221585
Length = 716
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 272 QSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQP 391
Q P KP PR S+ +GG +++ +GP+ P P
Sbjct: 81 QKPPKPAIAKP-VVRPRPSIQQGGYQKNVIGPQSRTKPAP 119
>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
Length = 939
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 100 GSSLHILCTKH*LQFVKAASIGSRGLGTLSIYLSWVVKKIFLRMF 234
GSS+ LC KH LQ+++ S GS+G + SW L+ F
Sbjct: 675 GSSIIKLC-KHKLQYLRIRSEGSQGCSLGFLLNSWSCPPHLLQKF 718
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 341 GSRRHALGPRDERTPQPPAATPTHGAEVAAQPA 439
G RR ALG R R P AATP A A
Sbjct: 35 GLRREALGLRSLRAPPRAAATPRKAAAATGNGA 67
>01_01_1153 - 9172529-9172678,9173416-9173642,9174139-9174310
Length = 182
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 535 SLAGACSF*CRRE*SLSASCLVFASNMWLKLPSRLSGDLCSVCG 404
+LAG+C+ C L++ C VF + L +P S C CG
Sbjct: 80 TLAGSCTTHCMLWGLLTSLCCVFTGGLVLAVPG--SAVACYACG 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,660,994
Number of Sequences: 37544
Number of extensions: 378199
Number of successful extensions: 1523
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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