Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I17
(558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51950| Best HMM Match : DUF1531 (HMM E-Value=3.3) 32 0.37
SB_11116| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_47656| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_47943| Best HMM Match : Toxin_R_bind_N (HMM E-Value=0.017) 30 1.1
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_2481| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07) 29 2.6
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_33215| Best HMM Match : HECT (HMM E-Value=0) 29 2.6
SB_5980| Best HMM Match : Stig1 (HMM E-Value=1.4) 29 2.6
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 28 4.5
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 5.9
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 5.9
SB_24713| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 28 5.9
SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_36909| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_51950| Best HMM Match : DUF1531 (HMM E-Value=3.3)
Length = 198
Score = 31.9 bits (69), Expect = 0.37
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 216 NIFE-DVLHQVENCGAALQGRAYQMQEPGSRNVRHLATLCFEEDRAVTLWVH-VTNAPRN 389
NIF+ D+ +V+ ++ +Q+ G + + EE ++ W+ V + R
Sbjct: 57 NIFQNDMTFEVKTASLSMYADDHQLYVKGG-TAECVEQILNEEGHKISQWIRGVKHKERK 115
Query: 390 LLQLPPHTEQRSPLSLLGNFNHMFDAKTRHEADKLYSRRHQNEQAPARDVRADRI 554
++ P R+ S N NH + R+ + +L + +N +AP+ D+ ++RI
Sbjct: 116 RIKKSPLAWDRTR-SEEQNGNHTYGLPNRYGSTRLLRKAVKNPKAPSTDI-SERI 168
>SB_11116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1661
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 257 SSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPT 409
S++T ++P GTR+ + RGG P D+R Q P + PT
Sbjct: 334 SATTTLNLPSGGTRRQ-QIDRLRQATRGGEEASPSAPSDKRGRQAPTSHPT 383
>SB_47656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 30.7 bits (66), Expect = 0.84
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 308 RASPRHSVLRGGSR-RHALGPRDERTPQPPAATPTHGAEVAAQPARQ 445
RA R++ L+ R RH L PRDE++ + P+ A+ +A+ R+
Sbjct: 169 RALERYNELKAAIRARHGLAPRDEKSGKGPSPKAREKAKKSARKIRE 215
>SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.7 bits (66), Expect = 0.84
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 308 RASPRHSVLRGGSR-RHALGPRDERTPQPPAATPTHGAEVAAQPARQ 445
RA R++ L+ R RH L PRDE++ + P+ A+ +A+ R+
Sbjct: 169 RALERYNELKAAIRARHGLAPRDEKSGKGPSPKAREKAKKSARKIRE 215
>SB_47943| Best HMM Match : Toxin_R_bind_N (HMM E-Value=0.017)
Length = 250
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 257 SSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHA 358
S S +S PD RK PR S++ G SRRHA
Sbjct: 169 SDSVNESYPDTNERKE---DPRVSLILGASRRHA 199
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +2
Query: 254 RSSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQ 433
RS + +S P + ASPRHS + + +++TP PP T G+ +
Sbjct: 677 RSPARIKSSPARSRSRSQSASPRHSKSKSPALSKVQVKTEKKTPSPPPIKKTIGS-ASPP 735
Query: 434 PARQLQPHVRRENQ 475
P+ + +R+ Q
Sbjct: 736 PSHHRSEYKKRDVQ 749
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +2
Query: 245 RKLRSSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEV 424
R+ SS R+S P + P R +P GSRR P+ E + P+A+P
Sbjct: 1056 RRPSSSPPRRSRPQRTSPSP-RRTPEDRRRSRGSRRSPSPPKREPRRRSPSASPPRREAR 1114
Query: 425 AAQPARQLQPHVRR 466
+R + VRR
Sbjct: 1115 KRSLSRSPKREVRR 1128
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3
Query: 484 ASCLVFASNMWLKLPSRLSGDLCSVCGGSCRRLRGAFVTWTQSVTARSSSKHRV 323
AS + N+W P LSGDL +C G FV+W+ S+ + SK V
Sbjct: 1327 ASVKLTGFNIW---PVALSGDLIGAMSYACLDEHGTFVSWS-SLYEQLQSKEEV 1376
>SB_2481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 405 PHTEQRSPLSLLGNFNHMFDAKTRHEADKLYSRRHQNEQAPARDVRADRI 554
P E+R ++ N NH + R+ + +L + +N +AP+ D+ ++RI
Sbjct: 29 PTLEERRKIACKQNGNHTYGLPNRYGSTRLLRKAVKNPKAPSTDI-SERI 77
>SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07)
Length = 2435
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = +2
Query: 233 STSGRKLRSSST-RQSIPD-AGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATP 406
+T G +L T + + D +R+ RHS + + GPR +R PP P
Sbjct: 1968 NTKGSRLNGDPTSKHDLADFESSRELLAPGERHSTVPSKAACEYPGPRAKRNSAPPDLQP 2027
Query: 407 T--HGAEVAAQPARQLQPHVRRENQ 475
T +G ++ Q A Q +V +++
Sbjct: 2028 TTSNGNSLSKQSASQESAYVSEDSR 2052
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 368 RDERTPQPPAATPTHGAEVAAQPA-----RQLQPHVRRENQARSR*ALLPTTSERTGACE 532
RD+RT + PTH ++ A+ R P + RE+ R AL +S + G E
Sbjct: 992 RDQRTGTDDTSAPTHVQDLQAREEGGSNHRPEAPDICRESSGSCRKALYCESSPKQGVQE 1051
Query: 533 RCQ 541
C+
Sbjct: 1052 SCR 1054
>SB_33215| Best HMM Match : HECT (HMM E-Value=0)
Length = 1128
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 365 PRDERTPQPPAATPTHG-AEVAAQPARQLQPHVRR 466
PR + + QPPA +PT G A A + L H RR
Sbjct: 543 PRLDTSAQPPAQSPTPGLAREATEAGTSLHQHSRR 577
>SB_5980| Best HMM Match : Stig1 (HMM E-Value=1.4)
Length = 712
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 365 PRDERTPQPPAATPTHGAEVAAQPARQLQPHVR 463
PR+ + QPPA T A V + R ++P VR
Sbjct: 678 PREAQQEQPPATQETASAPVVTRSGRVVKPPVR 710
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 135 TAVCEGGLYRVKRTGDLKHLLELG 206
T +C+ YR+ RTGD H L+LG
Sbjct: 915 TPLCDNDKYRISRTGD-THTLKLG 937
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +2
Query: 287 AGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAAT---PTHGAEVAAQPAR 442
AG RK A PR L+ R P +P PP P G ++A +P++
Sbjct: 108 AGERKAAGAGPRGPALKPPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQ 162
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +2
Query: 287 AGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAAT---PTHGAEVAAQPAR 442
AG RK A PR L+ R P +P PP P G ++A +P++
Sbjct: 20 AGERKAAGAGPRGPALKPPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQ 74
>SB_24713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 308 RASPRHSVLRGGSR-RHALGPRDERTPQPPAATPTHGAEVAAQPARQ 445
R R++ L+ R RH L PRDE++ + P+ A+ A+ R+
Sbjct: 152 RELERYNELKAAIRARHGLAPRDEKSGKGPSPEAREKAKKRARTIRE 198
>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 917
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 368 RDERTPQPPAATPTHGAEVAAQPARQLQPHVRRE 469
RDE QPP P E QPAR+ QP +++
Sbjct: 605 RDEPLEQPPEPLPQEAVE---QPARKAQPQSQQQ 635
>SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 357 LWVHVTNAPRNLLQLPPHTEQRSPLSLLGNFNHMFDAKTRHEADKLYSRRHQNEQAPARD 536
LW+ V L +L P P + N NH + R+ + +L + +N +AP+ D
Sbjct: 36 LWITVLPP---LSELIPLAAAERPSAAKQNGNHTYGLPNRYGSTRLLRKAVKNPKAPSTD 92
Query: 537 VRADRI 554
+ ++RI
Sbjct: 93 I-SERI 97
>SB_36909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 444 NFNHMFDAKTRHEADKLYSRRHQNEQAPARDVRADRI 554
N NH + R+E+ +L + +N +AP+ D+ ++RI
Sbjct: 3 NGNHTYGLPNRYESTRLLRKAVKNPKAPSTDI-SERI 38
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 248 KLRSSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPT 409
K S TR++ + G ++ S LR R + P+D+R+ P + PT
Sbjct: 1654 KAGKSQTRENPQERGNKESTVESKDVKNLRENEARRSSSPKDKRSSTPDSRKPT 1707
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,508,359
Number of Sequences: 59808
Number of extensions: 411795
Number of successful extensions: 3424
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3423
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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