Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I17
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 32 0.24
Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 32 0.32
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 31 0.74
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 31 0.74
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 29 1.7
AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and inte... 29 1.7
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 29 1.7
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 29 1.7
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF039047-7|AAK95883.1| 187|Caenorhabditis elegans Hypothetical ... 29 2.3
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 29 3.0
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 28 5.2
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z82096-1|CAB05030.2| 229|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 28 5.2
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 28 5.2
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 9.1
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 27 9.1
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 32.3 bits (70), Expect = 0.24
Identities = 24/87 (27%), Positives = 38/87 (43%)
Frame = +2
Query: 257 SSSTRQSIPDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQP 436
SSS+ S AG + A P ++ S L P + PPA PT E+ +P
Sbjct: 179 SSSSSDSEDAAGPPRMTGAPPSIRMVSSSSSLKKL-PAPRKPSPPPAVEPTRSVEIIEKP 237
Query: 437 ARQLQPHVRRENQARSR*ALLPTTSER 517
+ +P +R+ A + AL P ++
Sbjct: 238 EKTEKPAEKRKTAATTS-ALEPAEKKK 263
>Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical
protein F13B10.1d protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.32
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 239 SGRKLRSSSTRQSIPDAGTRKP*-RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHG 415
+G R++ T + +P + R ++V R G R GPR E P P TPT
Sbjct: 264 TGELNRTTPTTKEMPSISRKTTQQRWQTTNTVSRTGPSRSIGGPRME--PPTPTFTPTGS 321
Query: 416 AEVAAQPARQLQP 454
E A R++QP
Sbjct: 322 QERATSTRRKIQP 334
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 31.9 bits (69), Expect = 0.32
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 239 SGRKLRSSSTRQSIPDAGTRKP*-RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHG 415
+G R++ T + +P + R ++V R G R GPR E P P TPT
Sbjct: 507 TGELNRTTPTTKEMPSISRKTTQQRWQTTNTVSRTGPSRSIGGPRME--PPTPTFTPTGS 564
Query: 416 AEVAAQPARQLQP 454
E A R++QP
Sbjct: 565 QERATSTRRKIQP 577
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 293 TRKP*RASPRHSVLRGGSRRHALGPRDERTPQPP 394
+RKP PRH + GG RR D + P+PP
Sbjct: 529 SRKPVSPEPRHLFVMGG-RRSTTPQEDRKVPEPP 561
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 293 TRKP*RASPRHSVLRGGSRRHALGPRDERTPQPP 394
+RKP PRH + GG RR D + P+PP
Sbjct: 625 SRKPVSPEPRHLFVMGG-RRSTTPQEDRKVPEPP 657
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 293 TRKP*RASPRHSVLRGGSRRHALGPRDERTPQPP 394
+RKP PRH + GG RR D + P+PP
Sbjct: 671 SRKPVSPEPRHLFVMGG-RRSTTPQEDRKVPEPP 703
>Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical
protein F13B10.1e protein.
Length = 801
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 239 SGRKLRSSSTRQSIPDAGTRKP*-RASPRHSVLRGGSRRHALGPRDER-TPQPPAATPTH 412
+G R++ T + +P + R ++V R G R GPR E TP + TPT
Sbjct: 719 TGELNRTTPTTKEMPSISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTG 778
Query: 413 GAEVAAQPARQLQP 454
E A R++QP
Sbjct: 779 SQERATSTRRKIQP 792
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical protein
F13B10.1a protein.
Length = 930
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 239 SGRKLRSSSTRQSIPDAGTRKP*-RASPRHSVLRGGSRRHALGPRDER-TPQPPAATPTH 412
+G R++ T + +P + R ++V R G R GPR E TP + TPT
Sbjct: 848 TGELNRTTPTTKEMPSISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTG 907
Query: 413 GAEVAAQPARQLQP 454
E A R++QP
Sbjct: 908 SQERATSTRRKIQP 921
>AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform f protein.
Length = 589
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 239 SGRKLRSSSTRQSIPDAGTRKP*-RASPRHSVLRGGSRRHALGPRDER-TPQPPAATPTH 412
+G R++ T + +P + R ++V R G R GPR E TP + TPT
Sbjct: 507 TGELNRTTPTTKEMPSISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTG 566
Query: 413 GAEVAAQPARQLQP 454
E A R++QP
Sbjct: 567 SQERATSTRRKIQP 580
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 239 SGRKLRSSSTRQSIPDAGTRKP*-RASPRHSVLRGGSRRHALGPRDER-TPQPPAATPTH 412
+G R++ T + +P + R ++V R G R GPR E TP + TPT
Sbjct: 902 TGELNRTTPTTKEMPSISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTG 961
Query: 413 GAEVAAQPARQLQP 454
E A R++QP
Sbjct: 962 SQERATSTRRKIQP 975
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 239 SGRKLRSSSTRQSIPDAGTRKP*-RASPRHSVLRGGSRRHALGPRDER-TPQPPAATPTH 412
+G R++ T + +P + R ++V R G R GPR E TP + TPT
Sbjct: 849 TGELNRTTPTTKEMPSISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTG 908
Query: 413 GAEVAAQPARQLQP 454
E A R++QP
Sbjct: 909 SQERATSTRRKIQP 922
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2
Query: 230 CSTSGRKLRSSSTRQSIPDAGTRKP*RASPRHSVLRGGS-RRHALGPRDERTPQPPAATP 406
C TS LR + + D RK R S RR + R+ PPA
Sbjct: 155 CFTSHDDLRDAMNKLQGEDLNGRKLKCTDETRDRSRSRSPRRRSRSRSPTRSRSPPARRR 214
Query: 407 THGAEVAAQPARQLQPHVRRENQARS 484
+ G++ + + +R P R + +ARS
Sbjct: 215 SPGSDRSDRKSRSASPKKRSDKRARS 240
>AF039047-7|AAK95883.1| 187|Caenorhabditis elegans Hypothetical
protein K11D12.7 protein.
Length = 187
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 288 ASGMLCLVELLRSFRPDVEHPQKYFLDNPTQVN 190
A G+LCL+++ FR + EHP + + T +
Sbjct: 7 AIGLLCLIDVSAQFRAECEHPLHFGVQQCTNTS 39
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +2
Query: 392 PAATPTHGAEVAAQPARQLQP-HVRRENQARSR*ALLPTTSERTGACE------RCQGRS 550
P+A A+ AAQPA+ QP ++ Q + ++P+ S++ AC RC+G
Sbjct: 1329 PSAARQEQAQPAAQPAQPAQPSNIVSPPQQSASPVVVPSNSKQRDACHLNVDQGRCKGAF 1388
Query: 551 D 553
D
Sbjct: 1389 D 1389
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +2
Query: 392 PAATPTHGAEVAAQPARQLQP-HVRRENQARSR*ALLPTTSERTGACE------RCQGRS 550
P+A A+ AAQPA+ QP ++ Q + ++P+ S++ AC RC+G
Sbjct: 1329 PSAARQEQAQPAAQPAQPAQPSNIVSPPQQSASPVVVPSNSKQRDACHLNVDQGRCKGAF 1388
Query: 551 D 553
D
Sbjct: 1389 D 1389
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 320 RHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPH 457
+H + G + + + TP P AATPT + ++ P QP+
Sbjct: 65 QHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSSQPN 110
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 320 RHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPH 457
+H + G + + + TP P AATPT + ++ P QP+
Sbjct: 65 QHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSSQPN 110
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 320 RHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPH 457
+H + G + + + TP P AATPT + ++ P QP+
Sbjct: 65 QHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSSQPN 110
>Z82096-1|CAB05030.2| 229|Caenorhabditis elegans Hypothetical
protein ZK909.3 protein.
Length = 229
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 417 QRSPLSLLGNFNHMFDAKTRHEADKLYSRRHQNEQAP 527
+R L + H AK H ADKLY+ R +AP
Sbjct: 151 ERKKLQIENYGKHSHQAKLVHLADKLYNLRDLERKAP 187
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 463 SNMWLKLPSRLSGDLCSVCGGSCRRLRGAFVTWTQSVTARSSSKHRVA 320
SN LK+ SR + + G S ++L +FV W+ SS KH+++
Sbjct: 378 SNEELKVDSRNDLGVSVMDGCSVQKLVSSFVKWSPIEKECSSCKHKIS 425
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 320 RHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPH 457
+H + G + + + TP P AATPT + ++ P QP+
Sbjct: 65 QHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSSQPN 110
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 320 RHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPH 457
+H + G + + + TP P AATPT + ++ P QP+
Sbjct: 65 QHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSSQPN 110
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 463 SNMWLKLPSRLSGDLCSVCGGSCRRLRGAFVTWTQSVTARSSSKHRVA 320
SN LK+ SR + + G S ++L +FV W+ SS KH+++
Sbjct: 378 SNEELKVDSRNDLGVSVMDGCSVQKLVSSFVKWSPIEKECSSCKHKIS 425
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +2
Query: 338 GGSRRHALGP---RDERTPQPPAATPTHGAEVAAQPARQLQPHVRRENQARSR*ALLPTT 508
GG R A P R R+P PPA++ + + + + V N S L ++
Sbjct: 592 GGVRGRAASPESVRSSRSPSPPASSSGRTSPAMSTISSMSRLKVSASNVTNSGMRKLSSS 651
Query: 509 SERTGACERCQGRSDL 556
G CE + S++
Sbjct: 652 PHLLGICEETEDGSEV 667
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +2
Query: 338 GGSRRHALGP---RDERTPQPPAATPTHGAEVAAQPARQLQPHVRRENQARSR*ALLPTT 508
GG R A P R R+P PPA++ + + + + V N S L ++
Sbjct: 592 GGVRGRAASPESVRSSRSPSPPASSSGRTSPAMSTISSMSRLKVSASNVTNSGMRKLSSS 651
Query: 509 SERTGACERCQGRSDL 556
G CE + S++
Sbjct: 652 PHLLGICEETEDGSEV 667
>Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3b protein.
Length = 634
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 385 RGAFVTWTQSVTARSSSKHRVAR*RTLRLPGSCIWYALPC 266
RGAF W+Q + R+S KH V+R +L + I A+ C
Sbjct: 177 RGAFQEWSQQESVRNSCKH-VSRPTSLHTIPAHIEKAVRC 215
>Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3a protein.
Length = 634
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 385 RGAFVTWTQSVTARSSSKHRVAR*RTLRLPGSCIWYALPC 266
RGAF W+Q + R+S KH V+R +L + I A+ C
Sbjct: 177 RGAFQEWSQQESVRNSCKH-VSRPTSLHTIPAHIEKAVRC 215
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +2
Query: 281 PDAGTRKP*RASPRHSVLRGGSRRHALGPRDERTPQPPAATPTHGAEVAAQPARQLQPHV 460
P +GT P + PR S G+R T PPA T +PA QP V
Sbjct: 286 PSSGTSAP-QPPPRGSTAAPGTRAPPATRAPPATRAPPAT--TRAPPATTRPAPASQPPV 342
Query: 461 R 463
R
Sbjct: 343 R 343
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = -3
Query: 448 KLPSRLSGDLCSVCGG---SCRRLRGAF 374
+L S L D C VCGG SC+ ++G F
Sbjct: 748 QLHSTLRRDKCGVCGGDDSSCKVVKGTF 775
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = -3
Query: 448 KLPSRLSGDLCSVCGG---SCRRLRGAF 374
+L S L D C VCGG SC+ ++G F
Sbjct: 748 QLHSTLRRDKCGVCGGDDSSCKVVKGTF 775
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 RGGSRRHA-LGPRDERTPQPPAATPTHGAEVAAQPARQLQPHVRR 466
RG +H PR R P+PP ATP + P H RR
Sbjct: 40 RGHHHKHGPRPPRPNRPPRPPPATPPPTTPAPSCPGGWSLIHRRR 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,274,653
Number of Sequences: 27780
Number of extensions: 289375
Number of successful extensions: 993
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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