BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0005_I16 (420 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0941 + 32953065-32953089,32954252-32954406,32954486-329545... 30 0.87 11_01_0521 + 4083594-4083763,4083765-4083963,4084059-4084244,408... 29 1.5 07_01_0896 - 7508341-7508715,7511746-7511886 29 1.5 04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 29 2.0 03_06_0677 + 35476009-35476014,35476974-35477474,35477574-354777... 27 4.6 09_02_0422 + 9103101-9103106,9103278-9103494,9104473-9104483 27 8.1 03_06_0636 - 35215034-35215336,35215417-35215584,35215599-352157... 27 8.1 >02_05_0941 + 32953065-32953089,32954252-32954406,32954486-32954587, 32955089-32955140,32955237-32955349,32955542-32955610, 32955942-32956049,32956517-32956661,32957245-32957476, 32957567-32957853,32957951-32958087,32958520-32958667, 32959464-32959595,32960239-32960367,32960707-32960834, 32960911-32961075,32961462-32961587,32962088-32962161, 32962285-32962534,32962875-32963054,32963128-32963361, 32964771-32964840,32965065-32965177,32965403-32965511, 32965639-32965688,32965823-32965889,32966131-32966203, 32966393-32966448,32966729-32966831,32967377-32967458, 32967717-32967779,32967918-32967977,32968356-32968448, 32968561-32968623,32968699-32968797 Length = 1363 Score = 29.9 bits (64), Expect = 0.87 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 205 NGTTSLISFM*QPSLCANSFGFLGKAPIHTAALTVQTIMD 86 N T + SF+ P+LCA G + P+ AA ++T+ + Sbjct: 965 NYTRDVGSFLDHPTLCARCHGVIDLPPVPAAAAGIETLRE 1004 >11_01_0521 + 4083594-4083763,4083765-4083963,4084059-4084244, 4085834-4086025,4086979-4087200,4089238-4089444, 4089681-4090082,4090201-4090230,4090307-4090318 Length = 539 Score = 29.1 bits (62), Expect = 1.5 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +3 Query: 75 ILIISMIVCTVNAAVWIGAFPKKPKELAHKEGCYIKEIN 191 +L I +IV VW G+F KKPK L + C ++E+N Sbjct: 503 LLAIFLIVVLTMLIVW-GSFVKKPKGL--NDRCLLQEVN 538 >07_01_0896 - 7508341-7508715,7511746-7511886 Length = 171 Score = 29.1 bits (62), Expect = 1.5 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3 Query: 385 SFSESHLISGQHTGYGFLGSISVTW 311 +F S L GQHT YGF+ + TW Sbjct: 31 AFGSSILTMGQHTEYGFVPVANPTW 55 >04_03_0812 - 19922208-19922357,19922448-19922564,19922681-19922752, 19922864-19923993,19924939-19925008,19925125-19925199 Length = 537 Score = 28.7 bits (61), Expect = 2.0 Identities = 14/52 (26%), Positives = 22/52 (42%) Frame = +3 Query: 243 ITCGGSMIDYASCGVVATNDEHCHVTEIDPKKPYPVCCPDIKCDSENDIHVV 398 + CGG+ + Y + D E D + PY + KC S N +H + Sbjct: 102 LECGGAYLKY-----IRPQDAAWDAKEFDNETPYTIMFGPDKCGSTNKVHFI 148 >03_06_0677 + 35476009-35476014,35476974-35477474,35477574-35477762, 35477925-35477945 Length = 238 Score = 27.5 bits (58), Expect = 4.6 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 Query: 164 LMCQFLWFLRKGPYPYRSVNGTNNHG 87 L Q+ RKG P RSVN N+HG Sbjct: 21 LYTQYFENARKGKSPGRSVNPNNHHG 46 >09_02_0422 + 9103101-9103106,9103278-9103494,9104473-9104483 Length = 77 Score = 26.6 bits (56), Expect = 8.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +2 Query: 308 LPRHRDRPQEAISCVLSGYQM*LRK*HPCRILSYNL 415 LP+ RDR EA++ +L + + HP +L YN+ Sbjct: 18 LPKERDR--EALNMLLEKLKAKIDSLHPMNVLPYNI 51 >03_06_0636 - 35215034-35215336,35215417-35215584,35215599-35215799, 35215877-35215962,35216037-35216229,35216304-35216489 Length = 378 Score = 26.6 bits (56), Expect = 8.1 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -2 Query: 284 TTRSVINHASSTGNSVA-MSDGLEFC-SKRYHIIDFF 180 T SVI H SST NS A S+ E C + + +IDF+ Sbjct: 196 TLYSVITHLSSTQNSPASSSESSENCHAAKAAVIDFY 232 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,131,009 Number of Sequences: 37544 Number of extensions: 264124 Number of successful extensions: 536 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 530 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 536 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 766563072 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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