Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I14
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.9  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   6.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.0  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 98  LMVLGAILAVCNFFG 142
           L+VLG+I+ V +FFG
Sbjct: 55  LIVLGSIIFVISFFG 69


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 26  HYTFIYYNKTN*NNVLKCNYMIHCLMVLGAILAVCNFFGSF 148
           +Y    YN  N NN  K  Y I+ +  +   + V  + G+F
Sbjct: 100 NYNNYNYNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNF 140


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 212 PPQFCFCRENWLSGCP 259
           P QF    +NW+ G P
Sbjct: 333 PEQFKVIIDNWIKGTP 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,755
Number of Sequences: 438
Number of extensions: 2622
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)