Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I13
         (412 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   1.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   2.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   4.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   6.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   8.2  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 351 VPERMRSTATAAANDSRSPS 410
           +P+R  STA++A+N S S S
Sbjct: 202 IPQRTASTASSASNYSPSQS 221



 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 345 LLVPERMRSTATAAANDSRSPS 410
           LLVP   R+ +TA++  + SPS
Sbjct: 198 LLVPIPQRTASTASSASNYSPS 219


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 72  IFSFFYHLTPFCNTIWCFLLKSCFTVFVSNVCLIFIVTNL 191
           ++ FF+HL+     +  +LLK+     +    L  IVT+L
Sbjct: 274 MYVFFFHLSDVRYVMVVYLLKNVVLYGLELFILAKIVTDL 313


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 341 TRQHAPSAKQQGFTHKSQSPQSNEKHRP 258
           TR  AP+ +  GF  +S   Q    ++P
Sbjct: 342 TRPAAPANRGNGFPKRSSDEQQWRNNQP 369


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
 Frame = +1

Query: 274 FDCGDCDLCVNPC--CLALGAC 333
           FD  DC L +NP   C A   C
Sbjct: 513 FDGNDCSLGINPWANCTASTRC 534


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
          protein 15 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 66 LHFPLFGRLLTVTCNCE 16
          +HF +FG LLT   + E
Sbjct: 5  IHFLVFGALLTYVSSVE 21


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 51  FGRLLTVTCNCE 16
           FGR  T TCN E
Sbjct: 341 FGRPATFTCNFE 352


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 11/48 (22%), Positives = 19/48 (39%)
 Frame = +2

Query: 32  TVNNLPKSGKCKQYFLLFLPFNTILQYNLVFPIKILFYSVRFKCVFNF 175
           T+N   K  +   Y  L         +  +F +  ++YSV    + NF
Sbjct: 124 TINYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIYYSVHEASIINF 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,252
Number of Sequences: 336
Number of extensions: 2309
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)