Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I13
(412 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43132| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.28
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_25392| Best HMM Match : PHD (HMM E-Value=0.0062) 30 0.65
SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031) 30 0.85
SB_59377| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7) 29 1.5
SB_21120| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_37223| Best HMM Match : ZZ (HMM E-Value=7.5) 29 2.0
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_27833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_4580| Best HMM Match : Pirin (HMM E-Value=4.1e-06) 28 2.6
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 28 3.4
SB_50834| Best HMM Match : GCR (HMM E-Value=2.5) 28 3.4
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 27 4.5
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18) 27 4.5
SB_3847| Best HMM Match : Sec1 (HMM E-Value=8.8e-14) 27 6.0
SB_2140| Best HMM Match : DUF1154 (HMM E-Value=1) 27 6.0
SB_39605| Best HMM Match : zf-TRAF (HMM E-Value=5.3e-39) 27 7.9
>SB_43132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 31.5 bits (68), Expect = 0.28
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 74 FLLFLPFNTILQYNLVFPIKILFYSVRFKCVFN 172
F LF PF ++Q++ FPI Y R + VFN
Sbjct: 18 FRLFRPFRLLVQHSPAFPIHAQPYKTRRRAVFN 50
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 30.7 bits (66), Expect = 0.49
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = +1
Query: 283 GDCDLCVNPCCLA--LGACCLV----PCLCPNACGQQQQP 384
GDCD+C + C + C + C CP++CG + P
Sbjct: 260 GDCDVCKDVSCTSPPFSTCVALNGRPACSCPSSCGDESLP 299
>SB_25392| Best HMM Match : PHD (HMM E-Value=0.0062)
Length = 485
Score = 30.3 bits (65), Expect = 0.65
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -1
Query: 409 DGERESFAAAVAVDRMRSGTSRVQDNTHRAPNSKDSHINHNPRSRMKNTGPFFC 248
DG + FA ++ R S QDN H+A + S N++ R R++ T FC
Sbjct: 112 DGFCDPFAWICIREQRRLSPSTPQDNGHQA---ETSEANYSTRQRVRTTLSLFC 162
>SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031)
Length = 563
Score = 29.9 bits (64), Expect = 0.85
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 262 LCFSFDCGDCDLCVNPCCLALGACCLVPC 348
LC + C CV PCC+ L CC V C
Sbjct: 340 LCRAVSCRVVLCCVVPCCVVL--CCAVSC 366
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +1
Query: 298 CVNPCCLALGA---CCLVPCLCPNAC 366
CV CC+ L CC+VPC C
Sbjct: 447 CVKLCCVVLHCVVLCCVVPCCVVLCC 472
>SB_59377| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7)
Length = 839
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 409 DGERESFAAAVAVDRMRSGTSRVQDNTHRAPNSKDSHINHNPRSRMKNTGPFFC 248
DG + FA ++ R S QDN H+A + S N++ R R + T FC
Sbjct: 80 DGFCDRFAWICIREQRRLSPSTPQDNGHQA---ETSEANYSTRLRARTTFSLFC 130
>SB_21120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 38 NNLPKSGKCKQYFLLFLPFNTILQYNLVFPIKILFYSV 151
N L + GK K Y +LF+P T+L N + + + F ++
Sbjct: 40 NILNEKGKTKDYHILFVPRKTVLCENRLKALGVSFVNI 77
>SB_37223| Best HMM Match : ZZ (HMM E-Value=7.5)
Length = 202
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 280 CGDCDLCVNPCCLALGACCLVPCLCPNACGQ 372
C D DLC +PC + C CPN +
Sbjct: 102 CRDLDLCRDPCIVPAEGNKPASCQCPNCLNE 132
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = +1
Query: 280 CGDCDLCVNPCCLALGACCLVP----CLCPN 360
C D D C N C GAC +P C CPN
Sbjct: 2572 CEDVDECFNDPCTNGGACINLPGDYECDCPN 2602
>SB_27833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 367 RMRSGTSRVQDNTHRAPNSKDSHI-NHNPRSRMKN 266
R S TSR+ DN+ A SKDS+I H P KN
Sbjct: 199 RCPSTTSRLTDNSLAAHTSKDSNITEHAPVKLSKN 233
>SB_4580| Best HMM Match : Pirin (HMM E-Value=4.1e-06)
Length = 336
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 268 FSFDCGDCDLCVNPCCLALGACCLVPCLCPNACG 369
F+ G C L V C L+ G C L +C + G
Sbjct: 32 FTLSAGICTLKVGVCTLSAGVCTLSASVCTLSAG 65
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 253 RMGLCFSFDCGDCDLCVNPCCLALGACCLVPCLC 354
++G+C + G C L + C L+ G C L +C
Sbjct: 42 KVGVC-TLSAGVCTLSASVCTLSAGVCTLSAGVC 74
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 259 GLCFSFDCGDCDLCVNPCCLALGACCLVPCLC 354
G+C + G C L V C L+ G C L +C
Sbjct: 65 GVC-TLSAGVCTLKVGVCTLSAGVCTLSASVC 95
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 289 CDLCVNPCCLALGACCLV---PCLCPNACGQQQQPPQTIHVHH 408
C + + PCC+ L +CC++ C C AC + + V H
Sbjct: 10 CCVLLMPCCVLLMSCCVMLMWYCSCRVACCSCRVAHAVLRVAH 52
>SB_50834| Best HMM Match : GCR (HMM E-Value=2.5)
Length = 909
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 367 RMRSGTSRVQDNTHRAPNSKDSHI-NHNPRSRMKN 266
R S TSR+ DN+ A SKDS+I H P KN
Sbjct: 174 RCPSTTSRLTDNSLDAHTSKDSNITEHAPVKLSKN 208
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 27.5 bits (58), Expect = 4.5
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +3
Query: 72 IFSFFYHLTPFCNTIWCFLLKSCFTVFVSNVCLIFIV 182
++ +F+ F ++ F+ F +FV N +F+V
Sbjct: 689 VYPYFFLFVVFAFVVFIFIFFFAFVIFVFNAFFVFVV 725
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 295 LCVNPCCLALGACCLVPCLCPNACGQQQQPPQTIHVHHP 411
LC + C +A CL+P + G+ + P I + HP
Sbjct: 462 LCCDKCPMAYHLKCLIPPMMRVPTGEWKCPRCQIEIQHP 500
>SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18)
Length = 134
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 295 LCVNPCCLALGACCLVPCLCPNACGQQQQPPQTIHVHHP 411
LC + C +A CL+P + G+ + P I + HP
Sbjct: 24 LCCDKCPMAYHLKCLIPPMMRVPTGEWKCPRCQIEIQHP 62
>SB_3847| Best HMM Match : Sec1 (HMM E-Value=8.8e-14)
Length = 605
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 50 KSGKCKQYFLLFLPFNTILQYNLVFPIKILFYSV 151
+ GK K Y +LF+P T+L N + + + F ++
Sbjct: 180 EKGKTKDYHILFVPRKTVLCENRLKALGVSFVNI 213
>SB_2140| Best HMM Match : DUF1154 (HMM E-Value=1)
Length = 155
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 181 TIKIKHTFETNTVKQDFNRKHQIVLQNGVKW*KKEKIL 68
+I+ H E N +K+ F+R+ + + KW ++E L
Sbjct: 38 SIEQDHEDEINKMKESFDRRETVASEMDYKWQRRENEL 75
>SB_39605| Best HMM Match : zf-TRAF (HMM E-Value=5.3e-39)
Length = 684
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 328 ACCLVPCLCPNACGQQQQPPQTIHVH 405
+C P CPN CG Q P + +H
Sbjct: 415 SCPSFPLSCPNNCGVAQIPRGEVELH 440
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,331,145
Number of Sequences: 59808
Number of extensions: 273948
Number of successful extensions: 848
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 752487277
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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