Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I13
(412 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 31 0.30
At3g20710.1 68416.m02621 F-box protein-related contains weak hit... 30 0.70
At4g07400.1 68417.m01135 F-box family protein (FBL8) (FBL24) con... 29 1.2
At1g17850.1 68414.m02209 expressed protein 28 2.1
At5g43610.1 68418.m05331 sucrose transporter-related / sucrose-p... 27 3.7
At2g43620.1 68415.m05422 chitinase, putative similar to basic en... 27 3.7
At2g14670.1 68415.m01650 sucrose transporter, putative / sucrose... 27 3.7
At1g66570.1 68414.m07564 sucrose transporter, putative / sucrose... 27 3.7
At4g12050.1 68417.m01917 DNA-binding protein-related contains Pf... 27 4.9
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 27 4.9
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 27 4.9
At5g34581.1 68418.m04037 hydroxyproline-rich glycoprotein family... 27 6.5
At5g04680.1 68418.m00476 expressed protein 27 6.5
At4g32630.1 68417.m04645 hypothetical protein 27 6.5
At3g58960.1 68416.m06570 F-box family protein contains F-box dom... 27 6.5
At2g43610.1 68415.m05421 glycoside hydrolase family 19 protein s... 27 6.5
At1g66610.1 68414.m07569 seven in absentia (SINA) protein, putat... 27 6.5
At5g54040.1 68418.m06721 DC1 domain-containing protein contains ... 26 8.6
At5g06170.1 68418.m00688 sucrose transporter, putative / sucrose... 26 8.6
At4g37850.1 68417.m05354 basic helix-loop-helix (bHLH) family pr... 26 8.6
At4g31240.2 68417.m04435 expressed protein 26 8.6
At4g31240.1 68417.m04434 expressed protein 26 8.6
At3g32400.1 68416.m04142 formin homology 2 domain-containing pro... 26 8.6
At1g69480.1 68414.m07983 EXS family protein / ERD1/XPR1/SYG1 fam... 26 8.6
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 31.1 bits (67), Expect = 0.30
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 235 KKEYNKRMGLCFSFDCGDCDL-CVNPC-CLALGACCLVPCLCPNAC 366
K+ K+ C F+ +C + C C CL G CC C CP +C
Sbjct: 639 KRITEKKDQPCRQFNPCNCKIACGKECPCLLNGTCCEKYCGCPKSC 684
>At3g20710.1 68416.m02621 F-box protein-related contains weak hit to
TIGRFAM TIGR01640 : F-box protein interaction domain;
contains weak hit to Pfam PF00646: F-box domain
Length = 362
Score = 29.9 bits (64), Expect = 0.70
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -1
Query: 184 VTIKIKHTFETNTVKQDFNRKHQIVLQNGVKW*KKEKILFTLSTFW 47
++I++K + K D +K Q++ NGV +EK+L L+ +W
Sbjct: 83 LSIQLKAKIVSRDKKDDLFQKSQVIHCNGVFLCVREKMLVVLNPYW 128
>At4g07400.1 68417.m01135 F-box family protein (FBL8) (FBL24)
contains similarity to SKP1 interacting partner 2
GI:10716949 from [Arabidopsis thaliana]; contains Pfam
PF00646: F-box domain
Length = 554
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 250 KRMGLCFSFDCGDCDL-CVNPCCLALGACCLVPC 348
+R+ LC S GD +L C+ CLAL C+ C
Sbjct: 398 ERLALCGSDTVGDTELCCIAEKCLALRKLCIKNC 431
>At1g17850.1 68414.m02209 expressed protein
Length = 423
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 265 CFSFDCGDCDLCVNPCCLALGACCLVPCL 351
C + DC LC C + L CC C+
Sbjct: 356 CANLDCNRLFLCCAECVVDLKGCCCSDCI 384
>At5g43610.1 68418.m05331 sucrose transporter-related /
sucrose-proton symporter-related similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, sucrose transporter [Arabidopsis thaliana]
GI:12057172; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 492
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 60 SVNNIFSFF-YHLTPFCNTIWCFLLKSCFTVFVSNVCLIFIV 182
S N++ F + +T C+ I+C LKSCF + ++ + ++ I+
Sbjct: 200 SYTNLYKIFPFTMTKACD-IYCANLKSCFFLSITLLLVVTII 240
>At2g43620.1 68415.m05422 chitinase, putative similar to basic
endochitinase CHB4 precursor SP:Q06209 from [Brassica
napus]
Length = 283
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +1
Query: 268 FSFDCGDCDLCVNPCCLALGACCLVPCLCPNAC 366
FS CG N CC G C C C
Sbjct: 27 FSQQCGTTGCAANLCCSRYGYCGTTDAYCGTGC 59
>At2g14670.1 68415.m01650 sucrose transporter, putative /
sucrose-proton symporter, putative similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, SUC2 [Arabidopsis thaliana] GI:407092,
sucrose transporter [Arabidopsis thaliana] GI:12057172;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 492
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 60 SVNNIFSFF-YHLTPFCNTIWCFLLKSCFTVFVSNVCLIFIV 182
S N++ F + +T C+ I+C LKSCF + ++ + ++ I+
Sbjct: 200 SYTNLYKIFPFTMTKACD-IYCANLKSCFFLSITLLLVVTII 240
>At1g66570.1 68414.m07564 sucrose transporter, putative /
sucrose-proton symporter, putative similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, sucrose transporter [Arabidopsis thaliana]
GI:12057172; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 491
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 60 SVNNIFSFF-YHLTPFCNTIWCFLLKSCFTVFVSNVCLIFIV 182
S N++ F + +T C+ I+C LKSCF + ++ + ++ I+
Sbjct: 199 SYTNLYKIFPFTMTKACD-IYCANLKSCFFLSITLLLVVTII 239
>At4g12050.1 68417.m01917 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 339
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 365 HAFGHKQGTRQHAPSAKQQGFTHKSQSPQSN 273
H +Q +QH +QQ F H Q PQ N
Sbjct: 25 HLQQQQQHQQQHQQQQQQQFFLHHHQQPQRN 55
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +1
Query: 280 CGDCDLCVNPC-CLALGACCLVPCLCPNAC 366
CG +C C CL CC C C +C
Sbjct: 611 CGCLSMCGKDCPCLTNETCCEKYCGCSKSC 640
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 27.1 bits (57), Expect = 4.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 337 LVPCLCPNACGQQQQPPQTIHVHH 408
L+PC CP C + + +T HH
Sbjct: 3 LLPCSCPLPCNETRSECETKSTHH 26
>At5g34581.1 68418.m04037 hydroxyproline-rich glycoprotein family
protein
Length = 161
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1
Query: 331 CCLVPCLCPNACGQQQQPPQTIHVHHP 411
CC+ C A + PPQTI P
Sbjct: 24 CCITDCFSEPATRPHKSPPQTIQTPTP 50
>At5g04680.1 68418.m00476 expressed protein
Length = 705
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -1
Query: 247 CTPF*LEKVNSFFKAVVAIKLVTIKIKHTFETNTVKQDFNRKHQIVLQNGVKW*K 83
C P +++ +FK V I K + E T + F ++HQ + Q KW K
Sbjct: 480 CAPLRMQRELQWFKEVERIAPEIEKERVNTEEQTPIEIFAKEHQGLRQEAEKWMK 534
>At4g32630.1 68417.m04645 hypothetical protein
Length = 531
Score = 26.6 bits (56), Expect = 6.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 316 NSKDSHINHNPRSR 275
N K H+ HNPRSR
Sbjct: 170 NHKQQHVTHNPRSR 183
>At3g58960.1 68416.m06570 F-box family protein contains F-box domain
Pfam:PF00646
Length = 475
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 20 QLHVTVNNLPKSGKCKQYFLLFLPFNTI 103
QL + NLP+S KCK F P +++
Sbjct: 448 QLRTNLLNLPRSSKCKTQFEFIPPRSSV 475
>At2g43610.1 68415.m05421 glycoside hydrolase family 19 protein
similar to chitinase GI:17799 from [Brassica napus];
contains Pfam profiles PF00182: Chitinase class I,
PF00187: Chitin recognition protein
Length = 281
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +1
Query: 259 GLCFSFDCGDCDLCVNPCCLALGACCLVPCLCPNAC 366
G FS +CG N CC G C C C
Sbjct: 24 GTAFSQNCGTNGCKGNMCCSRWGYCGTTKAYCGTGC 59
>At1g66610.1 68414.m07569 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 366
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = +1
Query: 253 RMGLCFSFDCGDCDLCVNPCCLALGACCLVPCLCPNAC 366
R G F D DC +C N + + C C + C
Sbjct: 44 RSGTLFELDLLDCPICCNALTIPIFQCDKGHIACSSCC 81
>At5g54040.1 68418.m06721 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 596
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 211 KSC*L--FQVKKEYNKRMGLCFSFDCGDCDLCVNPCCL 318
+SC L F + +R C S++C DC L ++ C+
Sbjct: 32 ESCSLCSFSKNSSWLRRSVTCISYECTDCGLTLHKECV 69
>At5g06170.1 68418.m00688 sucrose transporter, putative /
sucrose-proton symporter, putative similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, sucrose transporter [Arabidopsis thaliana]
GI:12057172; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 491
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 60 SVNNIFSFF-YHLTPFCNTIWCFLLKSCFTVFVSNVCLIFIV 182
S N+ F + +T C+ I+C LKSCF + ++ + ++ I+
Sbjct: 200 SYTNLHKIFPFTVTKACD-IYCANLKSCFIISITLLIVLTII 240
>At4g37850.1 68417.m05354 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 328
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 352 TSRVQDNTHRAPNSKDSHINHNPRSRM 272
T+ + ++H PNSK HI+ + SR+
Sbjct: 65 TTYISPSSHLPPNSKPHHIHRHSSSRI 91
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 26.2 bits (55), Expect = 8.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 241 EYNKRMGLCFSFDCGDCDLCVNPCCL 318
++ K+ G ++F C CD ++P C+
Sbjct: 359 DFCKKQGRFWAFSCNACDYDLHPTCV 384
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 26.2 bits (55), Expect = 8.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 241 EYNKRMGLCFSFDCGDCDLCVNPCCL 318
++ K+ G ++F C CD ++P C+
Sbjct: 359 DFCKKQGRFWAFSCNACDYDLHPTCV 384
>At3g32400.1 68416.m04142 formin homology 2 domain-containing
protein / FH2 domain-containing protein common family
members: At2g43800, At3g25500, At5g48360, At4g15200,
At3g05470, At3g07540, At5g07780, At5g07650 [Arabidopsis
thaliana];
Length = 488
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 35 VNNLPKSGKCKQYFLLFLPFNTILQYNLVFPIKILFYS 148
+ N G+C+Q+FL L + VF KI F+S
Sbjct: 218 IGNKETLGRCEQFFLELLKVPRVETKLRVFSFKIQFHS 255
>At1g69480.1 68414.m07983 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 777
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 74 FLLFLPFNTILQYNLVFPIKILFYSV 151
F+LF PFN I + + F I+ LF+ +
Sbjct: 508 FILFCPFNIIYRSSRFFFIRSLFHCI 533
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,056,921
Number of Sequences: 28952
Number of extensions: 178874
Number of successful extensions: 537
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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